Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0561800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:22152670:22154159:1 gene:Os10g0561800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 1 description:Similar to homeodomain leucine zipper protein hox1. (Os10t0561800-01)
Sequence	ATGGAGATGATGGTTCATGGGAGGAGAGACGAGCAGTATGGCGGGCTCAGGCTCGGGCTT GGGCTTGGGCTCAGCCTCGGCGTCGCCGGTGGTGCAGCCGACGACGAGCAGCCGCCGCCG CGCCGTGGTGCCGCCCCGCCGCCGCAGCAGCAGCTGTGCGGCTGGAACGGCGGCGGTCTC TTCTCCTCGTCTTCCTCCGATCATCGGGGGAGGTCGGCGATGATGGCGTGCCACGACGTC ATCGAGATGCCGTTCCTGCGGGGGATCGACGTGAACCGTGCGCCGGCGGCAGAGACGACC ACGACGACGGCGAGGGGGCCCAGCTGCAGCGAGGAAGACGAGGAGCCCGGCGCGTCCTCC CCCAACAGCACGCTCTCCAGCCTCAGCGGCAAGCGCGGCGCACCATCTGCCGCCACCGCC GCCGCCGCCGCCGCCAGCGACGACGAGGACTCCGGCGGCGGATCCCGCAAGAAGCTCCGC CTCTCCAAGGACCAAGCCGCCGTCCTCGAGGACACCTTCAAAGAGCACAACACCCTCAAT CCCAAGCAGAAGGCGGCGCTGGCGAGGCAGCTGAATCTGAAGCCGCGGCAGGTGGAGGTG TGGTTCCAGAACAGGAGGGCGAGGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGCTG CTCAAGCGCTGCTGCGAGACGCTCACCGACGAGAACCGCCGCCTCCACCGCGAGCTCCAG GAGCTCCGCGCCCTCAAGCTCGCCACCGCCGCCGCCGCGCCGCACCACCTCTACGGCGCC CGCGTCCCGCCGCCCACCACCCTCACCATGTGCCCCTCCTGCGAGCGCGTCGCCTCCGCA GCCACCACCACCCGCAACAACTCCGGCGCCGCCCCCGCGCGGCCGGTGCCCACCCGCCCG TGGCCGCCGGCGGCGGCGCAGAGGTCGTCGGCGTAG

Peptide Sequence

PEP ID	Os10t0561800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:22152670:22154159:1 gene:Os10g0561800 transcript:Os10t0561800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 1 description:Similar to homeodomain leucine zipper protein hox1. (Os10t0561800-01)
Sequence	MEMMVHGRRDEQYGGLRLGLGLGLSLGVAGGAADDEQPPPRRGAAPPPQQQLCGWNGGGL FSSSSSDHRGRSAMMACHDVIEMPFLRGIDVNRAPAAETTTTTARGPSCSEEDEEPGASS PNSTLSSLSGKRGAPSAATAAAAAASDDEDSGGGSRKKLRLSKDQAAVLEDTFKEHNTLN PKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQ ELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAATTTRNNSGAAPARPVPTRP WPPAAAQRSSA

Transcript Sequence

Transcript ID	Os10t0561800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:22152670:22154159:1 gene:Os10g0561800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOMEOBOX GENE 1 description:Similar to homeodomain leucine zipper protein hox1. (Os10t0561800-01)
Sequence	CCCTCAGTCCCTCACCTCCATTTCCATCAAGCCCAAGAACGAACTCACCACGCTAGTGTT GAGAAGTGGAGAGAGTTGAGAGGAATCAATGGAGATGATGGTTCATGGGAGGAGAGACGA GCAGTATGGCGGGCTCAGGCTCGGGCTTGGGCTTGGGCTCAGCCTCGGCGTCGCCGGTGG TGCAGCCGACGACGAGCAGCCGCCGCCGCGCCGTGGTGCCGCCCCGCCGCCGCAGCAGCA GCTGTGCGGCTGGAACGGCGGCGGTCTCTTCTCCTCGTCTTCCTCCGATCATCGGGGGAG GTCGGCGATGATGGCGTGCCACGACGTCATCGAGATGCCGTTCCTGCGGGGGATCGACGT GAACCGTGCGCCGGCGGCAGAGACGACCACGACGACGGCGAGGGGGCCCAGCTGCAGCGA GGAAGACGAGGAGCCCGGCGCGTCCTCCCCCAACAGCACGCTCTCCAGCCTCAGCGGCAA GCGCGGCGCACCATCTGCCGCCACCGCCGCCGCCGCCGCCGCCAGCGACGACGAGGACTC CGGCGGCGGATCCCGCAAGAAGCTCCGCCTCTCCAAGGACCAAGCCGCCGTCCTCGAGGA CACCTTCAAAGAGCACAACACCCTCAATCCCAAGCAGAAGGCGGCGCTGGCGAGGCAGCT GAATCTGAAGCCGCGGCAGGTGGAGGTGTGGTTCCAGAACAGGAGGGCGAGGACGAAGCT GAAGCAGACGGAGGTGGACTGCGAGCTGCTCAAGCGCTGCTGCGAGACGCTCACCGACGA GAACCGCCGCCTCCACCGCGAGCTCCAGGAGCTCCGCGCCCTCAAGCTCGCCACCGCCGC CGCCGCGCCGCACCACCTCTACGGCGCCCGCGTCCCGCCGCCCACCACCCTCACCATGTG CCCCTCCTGCGAGCGCGTCGCCTCCGCAGCCACCACCACCCGCAACAACTCCGGCGCCGC CCCCGCGCGGCCGGTGCCCACCCGCCCGTGGCCGCCGGCGGCGGCGCAGAGGTCGTCGGC GTAGAGACCCCACTACTGATTAATTAGTTAATTAGAGATGAGTAGTGGCTTTTTCTTAAT TAGCAGGGTATTAATTAATTACTTAATTAGGGTTGGACCCCTGTAGTTTTCTTGTTTATA CTACGTGTATAATTTAGCTCTGGTTTTGAACTTTTTAATTAGTTTCATAATCTTTTTTTT TCCTATCTCTCACTTCACCCTGTTTGTTGTTTACTCAGCAAAGAATATGGTGTCTTTGTA TAAAGTGATGCATGAAATGGATCATAAAAGTTTTCAATATTAATTCC