Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0561300-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:22124277:22127759:1 gene:Os10g0561300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharid transporter. (Os10t0561300-01)
Sequence

ATGGCGATTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGG
TACGGCGGGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGG
ATCCTCTTCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTG
AAGAGATTCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGC
GCGTTCGACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTC
GCGACCCTCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATC
GGCGGCACCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATG
CTGCTCATCAACCGGATCCTACTGGGAATAGGTCTCGGGTTCACTAATCAGTCAATCCCA
CTGTACCTGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAG
CTCTGCATCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATC
ACAGCTGGATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTA
ACCATCGGTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGAC
ACTGACAAGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAG
CTTGATGACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAAT
ATATTCAAGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAAC
CAGCTTACTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGT
CTGAAGGAGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCC
AATATCATGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGT
GGTATTCAGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAG
GACTATGGATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTT
GTTGCTGGCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGT
CCACTTGAGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACA
TTTGTGATTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTC
TTCTTTGCAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACA
AAGAAGCTGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAG
ATTGTAGGGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAA

Peptide Sequence

PEP ID

Os10t0561300-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:22124277:22127759:1 gene:Os10g0561300 transcript:Os10t0561300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharid transporter. (Os10t0561300-01)
Sequence

MAIGAFVESGGGGGGGGGGGYGGRVTAYVVLTCVVAGSGGILFGYDLGISGGVTSMDSFL
KRFFPDVYQKKQDTRVSHYCAFDSELLTVFTSSLYIAGLVATLFASSVTRRYGRRTSMLI
GGTVFIAGSVFGGAAVNVFMLLINRILLGIGLGFTNQSIPLYLSEMAPPRYRGAINNGFE
LCISLGILFANVLNYCVVKITAGWGWRISLSMAAVPAAFLTIGAVFLPETPSFIIERDGD
TDKARILLQRLRGTTSVQKELDDLVAASNLSRTVQYPFRNIFKRKYRPQLVIALLVPFFN
QLTGINVMNFYAPVMFRTIGLKESASLLSSVVNRLCATFANIMAMIVVDRFGRRKLFLVG
GIQMILSQLAVGAILAAEFKDYGSMDREYAYLVLITMCVFVAGFAWSWGPLTFLVPTEIC
PLEIRSAGQSIVVAVVFLMTFVIGQTFLAVLCRIKSGTFFFFAGWICLMTVFVYFFLPET
KKLPMEQMEQVWRKHWFWKKIVGEEEEKQAEKTALPSM

Transcript Sequence

Transcript ID

Os10t0561300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:22124277:22127759:1 gene:Os10g0561300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharid transporter. (Os10t0561300-01)
Sequence

ATGTCGGCATCCGCCAACCCCTCCTCGCCTTCTTCTTCTCCAGTAATAAATCCACGCAAA
AGCCTCGCCGCGCACCACCACCCAGCTCTCTCCACTCCACTCTCGCGTTCTTGTGGAGTC
GTGCTCCACTCCGGGAAGGAAGGAGTGGGTGGGTAGGTGAGTGGAGTTGGTCGATGGCGA
TTGGGGCGTTCGTGGAGAGCGGCGGCGGCGGCGGCGGGGGAGGGGGAGGAGGGTACGGCG
GGCGGGTGACGGCGTACGTGGTGCTGACCTGCGTCGTCGCCGGCAGCGGCGGGATCCTCT
TCGGCTACGACCTCGGCATCTCCGGTGGTGTGACCTCAATGGACTCGTTTCTGAAGAGAT
TCTTCCCGGATGTGTACCAGAAGAAGCAGGACACCAGAGTGAGCCACTACTGCGCGTTCG
ACAGCGAGCTCCTCACCGTGTTCACCTCGTCACTCTACATCGCCGGCCTCGTCGCGACCC
TCTTCGCGTCGTCCGTCACAAGGAGGTATGGCCGCCGGACGTCCATGCTGATCGGCGGCA
CCGTCTTCATCGCCGGCTCGGTGTTCGGCGGCGCCGCCGTCAATGTGTTCATGCTGCTCA
TCAACCGGATCCTACTGGGAATAGGTCTCGGGTTCACTAATCAGTCAATCCCACTGTACC
TGTCAGAAATGGCGCCTCCACGATACCGTGGGGCGATCAATAACGGCTTCGAGCTCTGCA
TCAGCCTCGGCATTCTCTTCGCAAATGTTCTTAACTATTGCGTTGTGAAAATCACAGCTG
GATGGGGCTGGAGGATATCCCTATCCATGGCTGCAGTTCCTGCTGCATTCCTAACCATCG
GTGCGGTCTTCCTCCCAGAGACACCGAGCTTCATAATCGAACGCGATGGCGACACTGACA
AGGCAAGGATCCTACTCCAGAGACTTCGTGGCACCACTTCAGTCCAGAAAGAGCTTGATG
ACTTAGTTGCTGCTAGCAACCTCTCCAGGACAGTTCAGTATCCGTTCAGGAATATATTCA
AGAGGAAATACAGGCCACAGCTTGTCATAGCACTCCTGGTCCCTTTCTTCAACCAGCTTA
CTGGAATCAATGTGATGAACTTCTATGCACCGGTTATGTTCAGGACGATTGGTCTGAAGG
AGAGCGCGTCTCTCCTATCCTCAGTGGTCAATCGACTCTGCGCAACTTTCGCCAATATCA
TGGCGATGATCGTTGTCGACAGGTTTGGGCGTAGAAAGCTCTTCCTTGTAGGTGGTATTC
AGATGATCCTTTCCCAGCTTGCTGTGGGTGCAATCCTGGCTGCAGAGTTCAAGGACTATG
GATCCATGGACAGAGAGTATGCTTACCTTGTGTTGATCACCATGTGTGTGTTTGTTGCTG
GCTTTGCATGGTCATGGGGGCCATTGACATTCTTGGTCCCAACTGAGATATGTCCACTTG
AGATCAGATCAGCAGGGCAGAGTATTGTTGTTGCAGTGGTCTTCCTGATGACATTTGTGA
TTGGACAGACATTCCTTGCAGTTCTATGCCGCATCAAGTCAGGGACATTCTTCTTCTTTG
CAGGATGGATCTGCTTGATGACAGTGTTTGTTTATTTCTTCCTGCCGGAGACAAAGAAGC
TGCCCATGGAGCAGATGGAGCAGGTCTGGAGGAAGCATTGGTTCTGGAAGAAGATTGTAG
GGGAGGAGGAGGAAAAACAAGCAGAGAAAACAGCTCTCCCTAGCATGTAAAGCCCTATGA
ATTGGAATGTATTTGACCATACAAAAACCATACAAAGTGTAGGGTTCTAATTAGCAAATG
TAAGTTTGTAATTCTTCTGTCTAAATGTAGTGTGTTGAGGTGGTCAGTTGCCGTGACTGG
CTCTTTCAGATGGTAATTACAAAGAAATGTAACATTAATGTTGTAACAAGGGTGCCATTT
TGTTTC