Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0559500-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:22020810:22022939:-1 gene:Os10g0559500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavonol synthase description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0559500-01);2OG-Fe(II) oxygenase domain containing protein. (Os10t0559500-02)
Sequence

ATAGATATGTCAAGGTTGATCAATCCTGAGTTCTCCGAGGAGGAGATTGCCAAGCTCGGA
TCAGCCTGTGAGGATTGGGGATTCTTCCAGCTTGTGAACCATGGGGTGGATGGGGAGTTG
CTGCAACGGATCAAGGATGACATCACAGAGTTCTTCAGACTTCCTCTGCAGGAGAAGATG
TCCGTGGCGATCCCACCCAATGGCTTGCAGGGGTTCGGTCACCACTTCGTCTTCTCCAAG
GAGCAGAAGCTGGACTGGGTCGATTTGCTCTTCCTCACCACACGCCCAGTGGAGGACAGG
ACCACAGAGTTCTGGCCTACAAAGCCTCCCACATTCAGGGACTCACTTGACAAGTACTCG
CTGGAGATTGCAAATGTGTCTGCTAAGCTGTTCAAGTTCATGGCCATCAACCTGGGCGTC
GACGAGGAGGCACTCCTTGCAGCATTCAAGCCAGAGCAACCTCAGAGTGTAAGGATCAAC
CATTACCCACCCTGCAGTCAGGCTAACAAGGTGCTGGGCCTCTCGCCGCACACGGATGGC
GTCGGCATGACACTGCTCCTCCAAGTGAACGACGTGCAAGGGCTCCAGATCAGGAAGGAC
GGCAGGTGGTTCGCCGTGAAGAACCTCCCTGGAGCCCTCGTCGTCAATGTCGGCGACGTT
CTTGAGATCCTCACCAATGGCAAGTACAAGAGTATTGAGCACAGAGCAGTAATAAACCCT
GATAAGGAAAGGATCACACTTGCTGCATTCCAGAGCGTTCCGCTTTCCAGCACAGTTGGC
CCACTCCAGGAGCTTCTGATGAAAGGTGAGGCACGCTACAAGACGGTTGATGGTGCTGAG
TTCACCAAAGGCTACTTTGCCGCGAAGCTGGAAGGCAGGAGATACCTGGAGAGCTTGAAG
CTGGGAGTGTGA

Peptide Sequence

PEP ID

Os10t0559500-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:22020810:22022939:-1 gene:Os10g0559500 transcript:Os10t0559500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavonol synthase description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0559500-01);2OG-Fe(II) oxygenase domain containing protein. (Os10t0559500-02)
Sequence

IDMSRLINPEFSEEEIAKLGSACEDWGFFQLVNHGVDGELLQRIKDDITEFFRLPLQEKM
SVAIPPNGLQGFGHHFVFSKEQKLDWVDLLFLTTRPVEDRTTEFWPTKPPTFRDSLDKYS
LEIANVSAKLFKFMAINLGVDEEALLAAFKPEQPQSVRINHYPPCSQANKVLGLSPHTDG
VGMTLLLQVNDVQGLQIRKDGRWFAVKNLPGALVVNVGDVLEILTNGKYKSIEHRAVINP
DKERITLAAFQSVPLSSTVGPLQELLMKGEARYKTVDGAEFTKGYFAAKLEGRRYLESLK
LGV

Transcript Sequence

Transcript ID

Os10t0559500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:22020810:22022939:-1 gene:Os10g0559500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:flavonol synthase description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0559500-01);2OG-Fe(II) oxygenase domain containing protein. (Os10t0559500-02)
Sequence

TAATAGATATGTCAAGGTTGATCAATCCTGAGTTCTCCGAGGAGGAGATTGCCAAGCTCG
GATCAGCCTGTGAGGATTGGGGATTCTTCCAGCTTGTGAACCATGGGGTGGATGGGGAGT
TGCTGCAACGGATCAAGGATGACATCACAGAGTTCTTCAGACTTCCTCTGCAGGAGAAGA
TGTCCGTGGCGATCCCACCCAATGGCTTGCAGGGGTTCGGTCACCACTTCGTCTTCTCCA
AGGAGCAGAAGCTGGACTGGGTCGATTTGCTCTTCCTCACCACACGCCCAGTGGAGGACA
GGACCACAGAGTTCTGGCCTACAAAGCCTCCCACATTCAGGGACTCACTTGACAAGTACT
CGCTGGAGATTGCAAATGTGTCTGCTAAGCTGTTCAAGTTCATGGCCATCAACCTGGGCG
TCGACGAGGAGGCACTCCTTGCAGCATTCAAGCCAGAGCAACCTCAGAGTGTAAGGATCA
ACCATTACCCACCCTGCAGTCAGGCTAACAAGGTGCTGGGCCTCTCGCCGCACACGGATG
GCGTCGGCATGACACTGCTCCTCCAAGTGAACGACGTGCAAGGGCTCCAGATCAGGAAGG
ACGGCAGGTGGTTCGCCGTGAAGAACCTCCCTGGAGCCCTCGTCGTCAATGTCGGCGACG
TTCTTGAGATCCTCACCAATGGCAAGTACAAGAGTATTGAGCACAGAGCAGTAATAAACC
CTGATAAGGAAAGGATCACACTTGCTGCATTCCAGAGCGTTCCGCTTTCCAGCACAGTTG
GCCCACTCCAGGAGCTTCTGATGAAAGGTGAGGCACGCTACAAGACGGTTGATGGTGCTG
AGTTCACCAAAGGCTACTTTGCCGCGAAGCTGGAAGGCAGGAGATACCTGGAGAGCTTGA
AGCTGGGAGTGTGAATGTGTCAGGATGAGTAGTTTTTGCTTCTCTTTGATTCTTTTGTTT
CGGTGAATGGATAACGATGCTACATCTTCCTCATCCTGGTACAATTCAGCTGGTATTTTC
CTTGACCATACACTCAACTGGAGTATTAGTGCCCATGAGCTAACGGCACAGAGAACAATG
GAACATATGGTAGAACTGGCTGGCAGGTATGATGTCCGAGATTGCGTACAACACGCAGTT
CCTTGGGATCCATTTCATATGCCAGTAAAGTATTGTCCAATCCATAATGAAAGAAGATCA
AATTGCACTCTGGATG