Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0558700-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:21988641:21990570:-1 gene:Os10g0558700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os10t0558700-01);2OG-Fe(II) oxygenase domain containing protein. (Os10t0558700-02);Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os10t0558700-03)
Sequence

ATGGCGGGAGCAAGATCCGTTGGTTCTCTCCCAGTGCCTAATGTGCAGGCGCTTGCAGAA
ATTTGCAATGATCCAGATGAACACATACCTGAAAGGTACATCAGACCAGAGGCTAGTTCT
GAGGAGGTCATCAACAACTACCAAGGTGACATGGCGATTCCGATCATCGATCTCAAGAAA
TTGCTTTGTCCGCAATCATCAGAAGAGGAGTGTGTGAAGCTGAGATCTGCCTGCCAGTAT
TGGGGGTTCTTTCTGCTCATTAACCATGGAGTGCCAGATGAAGTGATTGCAAACCTGAAG
AGAGACATTGTTGATTTCTTTAGCCAGCCACTGGACACCAAGAAGGAGTACACACAGCTA
CCGAATAGCCTAGAAGGCTATGGACAGAGCTTTGTTTTCTCTGAGGACCAGAAACTTGAC
TGGGCAGACATGCTGTATCTTCATGTCCATCCTAGCGATTCAAGGGACCTAAGGTTCTGG
CCCACTTCTCCAGCATCTTTCAGGCAATCCATTGATGCATACTCATCAGAGACTAAAAGC
CTGGCACTCTGCTTGTTTGAGTTCATGGCTAAGGCTGTGGGCGCTAAGCCAGAGTCACTT
TTAGATTTATTTGAAGAGCAGCCTCGAGGCTTAAGGATGGCCTATTACCCACCATGCCGG
CAAGCTGACAAGGTGATGGGCCTTTCGCCACACTCTGATGCGGGTGGCCTGACACTGCTG
CTCGAGATTAACAATGTGCAGGGCCTGCAGATCAAGAAAGATGGCAAGTGGTTCTCCATA
GATGCTCCAAATGGTGCACTTATTGCTAACATTGGCGACACACTTGAGATCCTGAGTAAC
GGAAAGTTCAGAAGTGTTGAACACAGGGCCGTGATAAACCCAAATAAAGAGCGAATTTCA
GCAGCACTCTTCCACTATCCAAGTGAAAATATGGTGATCAGCCCTCTGCCGGAGTTTGTG
AAAGATGGTAAAGTGAAGTACAGATCAATAAGTTACCTTGATTTCATGAAACAAATCTTC
ACACAACAGCTTGATGGAAAAAACCGAGTGGAGGTATTAAAGCTGGACCAGTAG

Peptide Sequence

PEP ID

Os10t0558700-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:21988641:21990570:-1 gene:Os10g0558700 transcript:Os10t0558700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os10t0558700-01);2OG-Fe(II) oxygenase domain containing protein. (Os10t0558700-02);Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os10t0558700-03)
Sequence

MAGARSVGSLPVPNVQALAEICNDPDEHIPERYIRPEASSEEVINNYQGDMAIPIIDLKK
LLCPQSSEEECVKLRSACQYWGFFLLINHGVPDEVIANLKRDIVDFFSQPLDTKKEYTQL
PNSLEGYGQSFVFSEDQKLDWADMLYLHVHPSDSRDLRFWPTSPASFRQSIDAYSSETKS
LALCLFEFMAKAVGAKPESLLDLFEEQPRGLRMAYYPPCRQADKVMGLSPHSDAGGLTLL
LEINNVQGLQIKKDGKWFSIDAPNGALIANIGDTLEILSNGKFRSVEHRAVINPNKERIS
AALFHYPSENMVISPLPEFVKDGKVKYRSISYLDFMKQIFTQQLDGKNRVEVLKLDQ

Transcript Sequence

Transcript ID

Os10t0558700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21988641:21990570:-1 gene:Os10g0558700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os10t0558700-01);2OG-Fe(II) oxygenase domain containing protein. (Os10t0558700-02);Similar to Oxidoreductase, 2OG-Fe oxygenase family protein, expressed. (Os10t0558700-03)
Sequence

CAGTATACAGCCTAGAACAACTGCTTGCCAAAAAAGGAAAAGAAAAGAAAACACTTAGTG
CAGAAACTGGGAATTGCAATGGCGGGAGCAAGATCCGTTGGTTCTCTCCCAGTGCCTAAT
GTGCAGGCGCTTGCAGAAATTTGCAATGATCCAGATGAACACATACCTGAAAGGTACATC
AGACCAGAGGCTAGTTCTGAGGAGGTCATCAACAACTACCAAGGTGACATGGCGATTCCG
ATCATCGATCTCAAGAAATTGCTTTGTCCGCAATCATCAGAAGAGGAGTGTGTGAAGCTG
AGATCTGCCTGCCAGTATTGGGGGTTCTTTCTGCTCATTAACCATGGAGTGCCAGATGAA
GTGATTGCAAACCTGAAGAGAGACATTGTTGATTTCTTTAGCCAGCCACTGGACACCAAG
AAGGAGTACACACAGCTACCGAATAGCCTAGAAGGCTATGGACAGAGCTTTGTTTTCTCT
GAGGACCAGAAACTTGACTGGGCAGACATGCTGTATCTTCATGTCCATCCTAGCGATTCA
AGGGACCTAAGGTTCTGGCCCACTTCTCCAGCATCTTTCAGGCAATCCATTGATGCATAC
TCATCAGAGACTAAAAGCCTGGCACTCTGCTTGTTTGAGTTCATGGCTAAGGCTGTGGGC
GCTAAGCCAGAGTCACTTTTAGATTTATTTGAAGAGCAGCCTCGAGGCTTAAGGATGGCC
TATTACCCACCATGCCGGCAAGCTGACAAGGTGATGGGCCTTTCGCCACACTCTGATGCG
GGTGGCCTGACACTGCTGCTCGAGATTAACAATGTGCAGGGCCTGCAGATCAAGAAAGAT
GGCAAGTGGTTCTCCATAGATGCTCCAAATGGTGCACTTATTGCTAACATTGGCGACACA
CTTGAGATCCTGAGTAACGGAAAGTTCAGAAGTGTTGAACACAGGGCCGTGATAAACCCA
AATAAAGAGCGAATTTCAGCAGCACTCTTCCACTATCCAAGTGAAAATATGGTGATCAGC
CCTCTGCCGGAGTTTGTGAAAGATGGTAAAGTGAAGTACAGATCAATAAGTTACCTTGAT
TTCATGAAACAAATCTTCACACAACAGCTTGATGGAAAAAACCGAGTGGAGGTATTAAAG
CTGGACCAGTAGCTGTGACCATGACGCCTGAGATACTGACATGAACCTGCTTGGGGGCTG
TCCATGAGATCTGCTGCTTAGAGGTGAAACAATCCTGTATTACAATGATGATTTACCTGA
TATTTTGAGTCTTGTACCATATATCAGGAACAACATGTTCTTGATCAAGTTATGATGCAA
ACACCTGAAACAAAAAATGGAAATAAACATTGATGCCTTGAAGAATAAACTATATG