Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0558200-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:21968925:21970501:-1 gene:Os10g0558200 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0558200-00)
Sequence	ATGTCTCTACAGGTGCCAAATGTGCAGGAACTCGCACTGACTTGCAACCGACCTGACCAG CAGATACCTGACAGGTACATCAGGCCGGAGGCTGGCACCGAAGAGGTCATCTGCGGCCAA GGCATCAACACGGCAATCCCGGTCATCGATCTCGCCAAGCTGCTCAACCCGCAGTCATCC CAAGAGGAGTGTGCCAAGCTGCGATCTGCATGTCAGCACTGGGGTTTCTTCCAGCTCGTC AACCATGGGGTGCCTGACGATGTGATCAGCGACGTGAGGAGAGACTTAACTGAGTTCTTC AAGCTACCACTTGAAGCCAAGGAGGCGTACGCTAAACCACCAGACAAGTACGAAGGCTAT GGCCAGCACTTCGTCGTTTCAGAGAAGCAGAAGCTGGACTGGGGAGACCTGCTACACCTC CGGCTTCGCCCAACCGAGTCCAGGGATTTGAGGTTCTGGCCTGCCCATCCTTCATCTTTC AGGAATTCCATGGAGAGGTACTCCTTGGAGACGGCAAAAGTAGCACGCTGCCTGTTGGAG TTCTTGGCCATGGACATGGGCGTTGATCCGGAGTCTCTCCTGGAGGTATTCAGAGGCCAG CCCCAGAACATGAGGGTGAACTACTACCCGCCGTGCAGGCAAACCGGCAAGGTGCTCGGC CTGTCGCCGCACTGCGACGCGACCAGCCTGACGCTGCTGCTCCATGTGAACGACATGCAG GGCCTCCAGATCAGGAAGGACGGCAAGTGGCTCACCATCGAAGCCCTCGACGGCGCGTTC GTCGTCAACGTCGGCGACATGCTTGAGATTCTGAGCAATGGGAGGTACAGGAGCGTTGAG CACAGGGCCGTGGTGCACCCGGAGAAGGAGCGCATCTCGGCGGCGGTGTTCCACCAGGCG TGCCGGGACGCGACGGTCGGGCCTCTGCCGGAGCTCGTGACGAAGGACGGTGGCAGGCCG GTGTACAAGTCGATGGCCTACGAGGATTTCATGAAGCGCTTCTTCTCGGCCAAACTTGAC GGAAGGGCTAACGTCGAGGGCATGAAGATTTAG

Peptide Sequence

PEP ID	Os10t0558200-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:21968925:21970501:-1 gene:Os10g0558200 transcript:Os10t0558200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0558200-00)
Sequence	MSLQVPNVQELALTCNRPDQQIPDRYIRPEAGTEEVICGQGINTAIPVIDLAKLLNPQSS QEECAKLRSACQHWGFFQLVNHGVPDDVISDVRRDLTEFFKLPLEAKEAYAKPPDKYEGY GQHFVVSEKQKLDWGDLLHLRLRPTESRDLRFWPAHPSSFRNSMERYSLETAKVARCLLE FLAMDMGVDPESLLEVFRGQPQNMRVNYYPPCRQTGKVLGLSPHCDATSLTLLLHVNDMQ GLQIRKDGKWLTIEALDGAFVVNVGDMLEILSNGRYRSVEHRAVVHPEKERISAAVFHQA CRDATVGPLPELVTKDGGRPVYKSMAYEDFMKRFFSAKLDGRANVEGMKI

Transcript Sequence

Transcript ID	Os10t0558200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21968925:21970501:-1 gene:Os10g0558200 gene_biotype:protein_coding transcript_biotype:protein_coding description:2OG-Fe(II) oxygenase domain containing protein. (Os10t0558200-00)
Sequence	ATGTCTCTACAGGTGCCAAATGTGCAGGAACTCGCACTGACTTGCAACCGACCTGACCAG CAGATACCTGACAGGTACATCAGGCCGGAGGCTGGCACCGAAGAGGTCATCTGCGGCCAA GGCATCAACACGGCAATCCCGGTCATCGATCTCGCCAAGCTGCTCAACCCGCAGTCATCC CAAGAGGAGTGTGCCAAGCTGCGATCTGCATGTCAGCACTGGGGTTTCTTCCAGCTCGTC AACCATGGGGTGCCTGACGATGTGATCAGCGACGTGAGGAGAGACTTAACTGAGTTCTTC AAGCTACCACTTGAAGCCAAGGAGGCGTACGCTAAACCACCAGACAAGTACGAAGGCTAT GGCCAGCACTTCGTCGTTTCAGAGAAGCAGAAGCTGGACTGGGGAGACCTGCTACACCTC CGGCTTCGCCCAACCGAGTCCAGGGATTTGAGGTTCTGGCCTGCCCATCCTTCATCTTTC AGGAATTCCATGGAGAGGTACTCCTTGGAGACGGCAAAAGTAGCACGCTGCCTGTTGGAG TTCTTGGCCATGGACATGGGCGTTGATCCGGAGTCTCTCCTGGAGGTATTCAGAGGCCAG CCCCAGAACATGAGGGTGAACTACTACCCGCCGTGCAGGCAAACCGGCAAGGTGCTCGGC CTGTCGCCGCACTGCGACGCGACCAGCCTGACGCTGCTGCTCCATGTGAACGACATGCAG GGCCTCCAGATCAGGAAGGACGGCAAGTGGCTCACCATCGAAGCCCTCGACGGCGCGTTC GTCGTCAACGTCGGCGACATGCTTGAGATTCTGAGCAATGGGAGGTACAGGAGCGTTGAG CACAGGGCCGTGGTGCACCCGGAGAAGGAGCGCATCTCGGCGGCGGTGTTCCACCAGGCG TGCCGGGACGCGACGGTCGGGCCTCTGCCGGAGCTCGTGACGAAGGACGGTGGCAGGCCG GTGTACAAGTCGATGGCCTACGAGGATTTCATGAAGCGCTTCTTCTCGGCCAAACTTGAC GGAAGGGCTAACGTCGAGGGCATGAAGATTTAG