Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0557900-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:21955492:21957095:-1 gene:Os10g0557900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M10A and M12B, matrixin and adamalysin family protein. (Os10t0557900-00)
Sequence	ATGTTCCTATGTCGCCGCGCGGCTGCCGCGTCGTGCCTGGTCGCCGCCGTGGCGATGGTG GTGGTGCTCGGGCTCCCCGTGGTGCACGGGCACGGCGGCGTGGCGTGGCACTCGTTCAAG CAGCTGCTCGACGCGGGGCGAGGGAGCCATGTCACGGGGCTCGCGGAGCTGAAGCGGTAC CTGGCGAGGTTCGGGTACATGGCGAAGCCGGGGCGTGACACGACGGACGCCTTCGACGAG CACCTCGAGGTCGCCGTGAGGAGGTACCAGACGAGGTTCAGCCTGCCGGTCACCGGCCGG CTCGACAACGCCACGCTCGATCAGATCATGTCGCCGCGCTGCGGCGTCGGGGATGACGAT GTGGAGCGCCCCGTGTCCGTCGCGCTCTCGCCGGGGGCGCAGGGCGGCGTGGTCAGCCGG TTCACGTTCTTCAAGGGCGAGCCGCGATGGACGCGGTCGGACCCGCCGATCGTGCTGTCC TACGCCGTCTCGCCGACGGCCACCGTCGGCTACCTGCCGCCGGCCGCCGTGCGTGCCGTG TTCCAGCGCGCGTTCGCGCGGTGGGCGCGGACGATCCCCGTGGGCTTCGTCGAGACGGAC GACTACGAGGCGGCCGACATCAAGGTGGGCTTCTACGCCGGCAACCACGGCGACGGCGTG CCGTTCGACGGGCCGCTCGGCATCCTCGGCCACGCCTTCTCCCCAAAGAACGGGCGGCTC CACCTCGACGCGTCGGAGCACTGGGCGGTGGACTTCGACGTCGACGCGACGGCGTCGGCC ATCGACCTGGAGTCCGTGGCGACGCACGAGATCGGCCATGTCCTGGGGCTCGGCCACTCG GCGTCGCCGCGCGCCGTCATGTACCCGAGCATCAAGCCGCGGGAGAAGAAGGTGCGCCTC ACCGTGGACGACGTCGAGGGCGTGCAGGCGTTGTACGGCTCCAACCCACAGTTCAGCCTC AGCTCGCTCTCCGAGCAGGGCACGTCCAGCTCGTCGCCGCGGCGCTTGCTTGCTGGATCA GCTAGGCTGCTTTGTACAGTCTTGGTCATACTTGTGACGCAATTGTAG

Peptide Sequence

PEP ID	Os10t0557900-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:21955492:21957095:-1 gene:Os10g0557900 transcript:Os10t0557900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M10A and M12B, matrixin and adamalysin family protein. (Os10t0557900-00)
Sequence	MFLCRRAAAASCLVAAVAMVVVLGLPVVHGHGGVAWHSFKQLLDAGRGSHVTGLAELKRY LARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLDQIMSPRCGVGDDD VERPVSVALSPGAQGGVVSRFTFFKGEPRWTRSDPPIVLSYAVSPTATVGYLPPAAVRAV FQRAFARWARTIPVGFVETDDYEAADIKVGFYAGNHGDGVPFDGPLGILGHAFSPKNGRL HLDASEHWAVDFDVDATASAIDLESVATHEIGHVLGLGHSASPRAVMYPSIKPREKKVRL TVDDVEGVQALYGSNPQFSLSSLSEQGTSSSSPRRLLAGSARLLCTVLVILVTQL

Transcript Sequence

Transcript ID	Os10t0557900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21955492:21957095:-1 gene:Os10g0557900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M10A and M12B, matrixin and adamalysin family protein. (Os10t0557900-00)
Sequence	GATTAGAGAGTGGAGTTAGGTATTTTCGCGTCACGACGATGACCGGCGACAGTTGGTCGT CGTTGAGGAGATTGAATTCTTAACCAGTGGATTACGTGAGGAAGACCGTCTCTCCTCCGC CGCGAGGAGGAGGAAGACGACGAGGTCAGCCGGTGGCCAACCGGAGCTCCATCGGCTGAC CCACTTCTCCCTATCCACAGCTTTTTCTGTCTCTCGTCTCGTACTCTCGTGTGCACATAA AATTCTTCGTCCACCACTGCCTCCCCCGCGAGCCCCCACGATAACGAGAATAACGGCCAC ACCGGCCGCCTCGCCCTCGCCACGCCACGCCGCGCGCGCTCTCATGTTCCTATGTCGCCG CGCGGCTGCCGCGTCGTGCCTGGTCGCCGCCGTGGCGATGGTGGTGGTGCTCGGGCTCCC CGTGGTGCACGGGCACGGCGGCGTGGCGTGGCACTCGTTCAAGCAGCTGCTCGACGCGGG GCGAGGGAGCCATGTCACGGGGCTCGCGGAGCTGAAGCGGTACCTGGCGAGGTTCGGGTA CATGGCGAAGCCGGGGCGTGACACGACGGACGCCTTCGACGAGCACCTCGAGGTCGCCGT GAGGAGGTACCAGACGAGGTTCAGCCTGCCGGTCACCGGCCGGCTCGACAACGCCACGCT CGATCAGATCATGTCGCCGCGCTGCGGCGTCGGGGATGACGATGTGGAGCGCCCCGTGTC CGTCGCGCTCTCGCCGGGGGCGCAGGGCGGCGTGGTCAGCCGGTTCACGTTCTTCAAGGG CGAGCCGCGATGGACGCGGTCGGACCCGCCGATCGTGCTGTCCTACGCCGTCTCGCCGAC GGCCACCGTCGGCTACCTGCCGCCGGCCGCCGTGCGTGCCGTGTTCCAGCGCGCGTTCGC GCGGTGGGCGCGGACGATCCCCGTGGGCTTCGTCGAGACGGACGACTACGAGGCGGCCGA CATCAAGGTGGGCTTCTACGCCGGCAACCACGGCGACGGCGTGCCGTTCGACGGGCCGCT CGGCATCCTCGGCCACGCCTTCTCCCCAAAGAACGGGCGGCTCCACCTCGACGCGTCGGA GCACTGGGCGGTGGACTTCGACGTCGACGCGACGGCGTCGGCCATCGACCTGGAGTCCGT GGCGACGCACGAGATCGGCCATGTCCTGGGGCTCGGCCACTCGGCGTCGCCGCGCGCCGT CATGTACCCGAGCATCAAGCCGCGGGAGAAGAAGGTGCGCCTCACCGTGGACGACGTCGA GGGCGTGCAGGCGTTGTACGGCTCCAACCCACAGTTCAGCCTCAGCTCGCTCTCCGAGCA GGGCACGTCCAGCTCGTCGCCGCGGCGCTTGCTTGCTGGATCAGCTAGGCTGCTTTGTAC AGTCTTGGTCATACTTGTGACGCAATTGTAGATGATAGACATGTTTTTATAGGCAACAAA AAGATTTGATTGGATTAGAAAGAAAAAAAAAGTGTTATGCTGTGCAGCGTGATTCCATAG AAGAGGAAATGTCTCTTCTAGTGTGATAGCACAATTGGGTGTAGATAATTCAAAGAACTG CTTCTCAGTTTCTCTTCTTACAATATATATAGGCCTTTTAGCAG