Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0557600-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:21944314:21945183:1 gene:Os10g0557600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 7 description:Similar to GATA transcription factor 9. (Os10t0557600-00)
Sequence

GCGGCGCCTGGCCGCGGCGCCCGTAGCAAGAGGTCGCGCGCGACGGCCGCGGCCGCCGCC
GCGTGGCACTCCCTCGTCCCGCGCCCGCCGTCCCAGTCGTCGCCGTCGTCGTCGTGCTCG
TCGTCCGACTTCCCGTCCTCGAACAAGCCATCGGGCACCGCGAGGCCGAACGGCTCAGGA
GGCGGCAGCCGCGGCAAGAAGAGCCCCGGCCCCGCGGGGGCGGAGGTGGGCATGGAGGCC
GGCGTGCGGCGGTGCACGCACTGCGCGTCGGAGAAGACGCCGCAGTGGCGGACGGGGCCC
CTGGGCCCCAAGACCCTGTGCAACGCGTGCGGCGTGAGGTTCAAGTCCGGGCGGCTGATG
CCGGAGTACAGGCCGGCGGCGAGCCCCACGTTCGTGCTGACGCAGCACTCCAACTCCCAC
CGCAAGGTCATGGAGCTGCGCCGCCAGAAGGAGCTCCTCATCATCCGCGGCAGCCACCGC
GACGCCGCCGCGGCCGCAGCAGCAGCCGCCGCCGCCGCCGCCGCGGGATCCGCCGCGGCG
ACCGGGAGGCCGGAGCTCATGTTCCGCGACTACGGCGTGTGCTGA

Peptide Sequence

PEP ID

Os10t0557600-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:21944314:21945183:1 gene:Os10g0557600 transcript:Os10t0557600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 7 description:Similar to GATA transcription factor 9. (Os10t0557600-00)
Sequence

AAPGRGARSKRSRATAAAAAAWHSLVPRPPSQSSPSSSCSSSDFPSSNKPSGTARPNGSG
GGSRGKKSPGPAGAEVGMEAGVRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLM
PEYRPAASPTFVLTQHSNSHRKVMELRRQKELLIIRGSHRDAAAAAAAAAAAAAAGSAAA
TGRPELMFRDYGVC

Transcript Sequence

Transcript ID

Os10t0557600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21944314:21945183:1 gene:Os10g0557600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GATA TRANSCRIPTION FACTOR 7 description:Similar to GATA transcription factor 9. (Os10t0557600-00)
Sequence

CGGCGGCGCCTGGCCGCGGCGCCCGTAGCAAGAGGTCGCGCGCGACGGCCGCGGCCGCCG
CCGCGTGGCACTCCCTCGTCCCGCGCCCGCCGTCCCAGTCGTCGCCGTCGTCGTCGTGCT
CGTCGTCCGACTTCCCGTCCTCGAACAAGCCATCGGGCACCGCGAGGCCGAACGGCTCAG
GAGGCGGCAGCCGCGGCAAGAAGAGCCCCGGCCCCGCGGGGGCGGAGGTGGGCATGGAGG
CCGGCGTGCGGCGGTGCACGCACTGCGCGTCGGAGAAGACGCCGCAGTGGCGGACGGGGC
CCCTGGGCCCCAAGACCCTGTGCAACGCGTGCGGCGTGAGGTTCAAGTCCGGGCGGCTGA
TGCCGGAGTACAGGCCGGCGGCGAGCCCCACGTTCGTGCTGACGCAGCACTCCAACTCCC
ACCGCAAGGTCATGGAGCTGCGCCGCCAGAAGGAGCTCCTCATCATCCGCGGCAGCCACC
GCGACGCCGCCGCGGCCGCAGCAGCAGCCGCCGCCGCCGCCGCCGCGGGATCCGCCGCGG
CGACCGGGAGGCCGGAGCTCATGTTCCGCGACTACGGCGTGTGCTGATCAAGCGGCGCAC
GCGGCGTCCAGAGCGAGCCATGCAGGCGCAGCTACGCATCACATCGCATGCATGGATGGA
TGCATGCACAGCACAGACGCGCGGGCTTAGATCCTTTTGCGAAATTCTCCCGTCTCCCTT
TCTCTTGTTTATTTCCTCTCCCTTTTTTTCTCTTTTTTGCCTTATTCCAGATATTTTTCA
ATGCTTTTTTGTTAATTAATTTGTTGGTACCTACCTCCCTTGCAAGTTCTTCCTCCTCTA
TGAGAGAGATCAATCAATTCTGTTGGTATA