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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0555700-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:21835933:21837651:-1 gene:Os10g0555700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-EXPANSIN 2 description:Beta-expansin. (Os10t0555700-02)
Sequence

ATGGCTGGGGCCTCTGCCAAGGTCGTCGCGATGCTGCTCTCCGTGCTCGCCACGTACGGC
TTCGCCGCCGGCGTCGTCTACACCAACGACTGGCTCCCGGCCAAGGCCACCTGGTACGGC
CAGCCCAACGGCGCCGGACCCGACGACAACGGCGGTGCGTGCGGGTTCAAGAACACCAAC
CAGTACCCGTTCATGTCCATGACCTCCTGCGGCAACGAGCCTCTGTTCCAGGACGGCAAG
GGCTGTGGCGCCTGCTACCAGATACGGTGCACCAACAACCCGTCGTGCTCCGGGCAGCCC
AGGACGGTGATCATCACGGACATGAACTACTACCCCGTGGCCAGGTACCACTTCGACCTG
AGCGGCACGGCGTTCGGCGCCATGGCGAGGCCGGGGCTGAACGACCAGCTCCGCCACGCC
GGCATCATCGACATCCAGTTCAGGCGCGTCCCGTGCTACCACCGCGGCCTCTACGTGAAC
TTCCACGTCGAGGCCGGGTCCAACCCGGTGTACCTCGCCGTGCTGGTGGAGTTCGCCAAC
AAGGACGGCACGGTGGTGCAGCTCGACGTCATGGAGTCGCTCCCCAGCGGCAAGCCGACG
CGGGTCTGGACGCCCATGCGCCGCTCCTGGGGATCCATCTGGCGCCTCGACGCCAACCAC
CGCCTCCAGGGCCCCTTCTCCCTCCGCATGGTCAGCGAGTCCGGCCAGACCGTCATCGCC
CACCAGGTCATCCCGGCCAACTGGAGGGCCAACACCAACTACGGCTCCAAAGTCCAGTTC
CGTTGA

Peptide Sequence

PEP ID

Os10t0555700-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:21835933:21837651:-1 gene:Os10g0555700 transcript:Os10t0555700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-EXPANSIN 2 description:Beta-expansin. (Os10t0555700-02)
Sequence

MAGASAKVVAMLLSVLATYGFAAGVVYTNDWLPAKATWYGQPNGAGPDDNGGACGFKNTN
QYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPVARYHFDL
SGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGSNPVYLAVLVEFAN
KDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWRLDANHRLQGPFSLRMVSESGQTVIA
HQVIPANWRANTNYGSKVQFR

Transcript Sequence

Transcript ID

Os10t0555700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21835933:21837651:-1 gene:Os10g0555700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BETA-EXPANSIN 2 description:Beta-expansin. (Os10t0555700-02)
Sequence

AAAACACAAAGCAGACAAGGTAGTAGTACAGGCTTTTGTACGTACGTAGCAGAGGGAGTT
CCCAAGATGGCTGGGGCCTCTGCCAAGGTCGTCGCGATGCTGCTCTCCGTGCTCGCCACG
TACGGCTTCGCCGCCGGCGTCGTCTACACCAACGACTGGCTCCCGGCCAAGGCCACCTGG
TACGGCCAGCCCAACGGCGCCGGACCCGACGACAACGGCGGTGCGTGCGGGTTCAAGAAC
ACCAACCAGTACCCGTTCATGTCCATGACCTCCTGCGGCAACGAGCCTCTGTTCCAGGAC
GGCAAGGGCTGTGGCGCCTGCTACCAGATACGGTGCACCAACAACCCGTCGTGCTCCGGG
CAGCCCAGGACGGTGATCATCACGGACATGAACTACTACCCCGTGGCCAGGTACCACTTC
GACCTGAGCGGCACGGCGTTCGGCGCCATGGCGAGGCCGGGGCTGAACGACCAGCTCCGC
CACGCCGGCATCATCGACATCCAGTTCAGGCGCGTCCCGTGCTACCACCGCGGCCTCTAC
GTGAACTTCCACGTCGAGGCCGGGTCCAACCCGGTGTACCTCGCCGTGCTGGTGGAGTTC
GCCAACAAGGACGGCACGGTGGTGCAGCTCGACGTCATGGAGTCGCTCCCCAGCGGCAAG
CCGACGCGGGTCTGGACGCCCATGCGCCGCTCCTGGGGATCCATCTGGCGCCTCGACGCC
AACCACCGCCTCCAGGGCCCCTTCTCCCTCCGCATGGTCAGCGAGTCCGGCCAGACCGTC
ATCGCCCACCAGGTCATCCCGGCCAACTGGAGGGCCAACACCAACTACGGCTCCAAAGTC
CAGTTCCGTTGATCCATCGATCGATCTACCTATGTGCATGCAATGCCTTCGTCGTCTTGT
GTCGCCGGTCAAGAACGAATTTTGATTCTACCGATCGGCAGTTCGGCACTAGTACTGTAC
TACGATTCTGTGTGTGTGTGTGTGTGTGTGTGATTGCAATGCAAATTGCGAACGGATCAA
TTAAGAGCGTTTTTTTCTCTCTCTCTTTTTAATTTGTAGTTGTGTGTGTCAGCGAGATGT
GTGGGAAATGGAACAGGGGCAGGGCACGCAGTATCCATGTGCTTGCTCTGAACCGCCCAC
ATTGACAAATGACCCAATGCCAATATGCCATATATATATACCGGATTGGCAGACTTATTG
TATTGTGACCAAAACCAAGTTTGTAATTGAACTGAATTAATACGGTGTGTTTGCTTATC