Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0554200-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:21758010:21762202:-1 gene:Os10g0554200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.1B description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0554200-01);Nitrate transporter, Nitrate uptake, Nitrate transport (Os10t0554200-02)
Sequence	ATGGCGATGGTGTTGCCGGAGACGGCGGCGGAGGGGAAGGCGCTGACGGACGCGTGGGAC TACAAGGGGAGGCCGGCGGGGAGGGCGGCCACCGGCGGGTGGGGCTGCGCGGCGATGATC CTCGGGGCGGAGCTGTTCGAGCGGATGACGACGCTGGGCATCGCCGTCAACCTGGTGCCG TACATGACCGGGACGATGCACCTCGGCAATGCCGCCGCCGCCAACACGGTCACCAACTTC ATCGGCACCTCCTTCATGCTCTGCCTCCTCGGCGGCTTCGTCGCCGACACCTACCTCGGC CGCTACCTCACCATCGCCATCTTCGAGGCCGTCCAGGCCACCGGCGTGATGATACTCACG ATCTCCACGGCGGCGCCGGGGCTGCGGCCGCCGGCGTGCGGCGACCCGAAGGGGGCGAGC GCGGAGTGCGTGGCGGCGGACGGGACGCAGCTCGGGGTGCTCTACCTGGGGCTCTACCTG ACGGCGCTGGGCACGGGGGGGCTCAAGTCCAGCGTCTCCGGCTTCGGCTCCGACCAGTTC GACGAGTCCGACGTCGACGGCGAGAGGAAGAAGATGATGCGCTTCTTCAACTGGTTCTAC TTCTTCGTCAGCCTCGGCGCGCTGCTCGCCGTCACCGTGCTGGTGTACGTGCAGGACAAC GTCGGACGCCGGTGGGGGTACGGCATCTGCGCCGCCGGCATCCTCGCCGGCCTCGCCGTG TTCCTCTCCGGGACCAGGAGGTACAGGTTCAAGAAGCTGGTGGGGAGCCCCCTCACCCAG GTCGCCGCCGTCACCGCCGCCGCCTGGAGCAAGAGGTCGCTGCCGCTGCCGTCCGACCCA GACATGCTCTACGACGTCGACGACGCCGCCGCCGCCGGCCATGACGTCAAGGGCAAGCAG AGGATGCCACACAGCAAGGAGTGCCGGTTCCTGGACCATGCGGCGATCATCGACAGGTCG GCGGCGGAGTCGCCGGCGACGGCGAGCAAGTGGAGGCTGTGCACGAGGACGGACGTGGAG GAGGTGAAGCAGGTGGTGCGGATGCTCCCCATCTGGGCGACCACCATCATGTTCTGGACC ATCCACGCCCAGATGACCACCTTCGCCGTCGCGCAGGCCGAGCTCATGGACCGCCGCCTC GCCGGCGGCTTCCTCATCCCGGCGGGCTCCCTCACCGTCTTCCTCATCGCCTCCATCCTC CTCACCGTCCCCTTCTACGACCGCCTCGTCGTCCCCGTCGCGCGCCGCGCCACGGCCAAC CCGCACGGCCTCACCCCGCTCCAGCGCGTCTTCGTGGGCCTCTCCCTCTCCATCGCCGGC ATGGCCGTCGCCGCGGCCGTCGAGCGCCACCGCGCCACCGCCTCCGCCTCCGCCGCCGCC GCCGCGCCCACGGTGTTCCTCCTCATGCCGCAGTTCCTCCTCGTCGGCGCCGGCGAGGCG TTCACCTACATGGGCCAGCTCGACTTCTTCCTCCGCGAGTGCCCCAAGGGGATGAAGACC ATGAGCACGGGCCTCTTCCTCAGCACCTGCGCCATCGGCTTCTTCTTCAGCACGCTGCTC GTCACCATCGTCCACAAGGTCACCGGCCATGGCGCCCGCGGCGGCGGCTGGCTCGCCGAC AACCTCGACGACGGCAGGCTCGACTACTTCTACTGGCTGCTCGCCGTCATCAGCGCCATC AACCTCGTCCTCTTCACCGTCGCCGCCAGGGGGTACGTCTACAAGGAGAAGCGCCTCGCC GACGCCGGCATCGAGCTCGCCGACGAGGAGACCATCGCCGTCGGCCACTAA

Peptide Sequence

PEP ID	Os10t0554200-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:21758010:21762202:-1 gene:Os10g0554200 transcript:Os10t0554200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.1B description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0554200-01);Nitrate transporter, Nitrate uptake, Nitrate transport (Os10t0554200-02)
Sequence	MAMVLPETAAEGKALTDAWDYKGRPAGRAATGGWGCAAMILGAELFERMTTLGIAVNLVP YMTGTMHLGNAAAANTVTNFIGTSFMLCLLGGFVADTYLGRYLTIAIFEAVQATGVMILT ISTAAPGLRPPACGDPKGASAECVAADGTQLGVLYLGLYLTALGTGGLKSSVSGFGSDQF DESDVDGERKKMMRFFNWFYFFVSLGALLAVTVLVYVQDNVGRRWGYGICAAGILAGLAV FLSGTRRYRFKKLVGSPLTQVAAVTAAAWSKRSLPLPSDPDMLYDVDDAAAAGHDVKGKQ RMPHSKECRFLDHAAIIDRSAAESPATASKWRLCTRTDVEEVKQVVRMLPIWATTIMFWT IHAQMTTFAVAQAELMDRRLAGGFLIPAGSLTVFLIASILLTVPFYDRLVVPVARRATAN PHGLTPLQRVFVGLSLSIAGMAVAAAVERHRATASASAAAAAPTVFLLMPQFLLVGAGEA FTYMGQLDFFLRECPKGMKTMSTGLFLSTCAIGFFFSTLLVTIVHKVTGHGARGGGWLAD NLDDGRLDYFYWLLAVISAINLVLFTVAARGYVYKEKRLADAGIELADEETIAVGH

Transcript Sequence

Transcript ID	Os10t0554200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21758010:21762202:-1 gene:Os10g0554200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:nitrate transporter 1.1B description:TGF-beta receptor, type I/II extracellular region family protein. (Os10t0554200-01);Nitrate transporter, Nitrate uptake, Nitrate transport (Os10t0554200-02)
Sequence	ATCACAGCATCCATCGCCGCCGGCCACCACCACCACCACCGCCGCCGCCGTCTTACTCTC TCTGTCTCGAGCTCGAGCTTGTTGTTGTTGATATGGCGATGGTGTTGCCGGAGACGGCGG CGGAGGGGAAGGCGCTGACGGACGCGTGGGACTACAAGGGGAGGCCGGCGGGGAGGGCGG CCACCGGCGGGTGGGGCTGCGCGGCGATGATCCTCGGGGCGGAGCTGTTCGAGCGGATGA CGACGCTGGGCATCGCCGTCAACCTGGTGCCGTACATGACCGGGACGATGCACCTCGGCA ATGCCGCCGCCGCCAACACGGTCACCAACTTCATCGGCACCTCCTTCATGCTCTGCCTCC TCGGCGGCTTCGTCGCCGACACCTACCTCGGCCGCTACCTCACCATCGCCATCTTCGAGG CCGTCCAGGCCACCGGCGTGATGATACTCACGATCTCCACGGCGGCGCCGGGGCTGCGGC CGCCGGCGTGCGGCGACCCGAAGGGGGCGAGCGCGGAGTGCGTGGCGGCGGACGGGACGC AGCTCGGGGTGCTCTACCTGGGGCTCTACCTGACGGCGCTGGGCACGGGGGGGCTCAAGT CCAGCGTCTCCGGCTTCGGCTCCGACCAGTTCGACGAGTCCGACGTCGACGGCGAGAGGA AGAAGATGATGCGCTTCTTCAACTGGTTCTACTTCTTCGTCAGCCTCGGCGCGCTGCTCG CCGTCACCGTGCTGGTGTACGTGCAGGACAACGTCGGACGCCGGTGGGGGTACGGCATCT GCGCCGCCGGCATCCTCGCCGGCCTCGCCGTGTTCCTCTCCGGGACCAGGAGGTACAGGT TCAAGAAGCTGGTGGGGAGCCCCCTCACCCAGGTCGCCGCCGTCACCGCCGCCGCCTGGA GCAAGAGGTCGCTGCCGCTGCCGTCCGACCCAGACATGCTCTACGACGTCGACGACGCCG CCGCCGCCGGCCATGACGTCAAGGGCAAGCAGAGGATGCCACACAGCAAGGAGTGCCGGT TCCTGGACCATGCGGCGATCATCGACAGGTCGGCGGCGGAGTCGCCGGCGACGGCGAGCA AGTGGAGGCTGTGCACGAGGACGGACGTGGAGGAGGTGAAGCAGGTGGTGCGGATGCTCC CCATCTGGGCGACCACCATCATGTTCTGGACCATCCACGCCCAGATGACCACCTTCGCCG TCGCGCAGGCCGAGCTCATGGACCGCCGCCTCGCCGGCGGCTTCCTCATCCCGGCGGGCT CCCTCACCGTCTTCCTCATCGCCTCCATCCTCCTCACCGTCCCCTTCTACGACCGCCTCG TCGTCCCCGTCGCGCGCCGCGCCACGGCCAACCCGCACGGCCTCACCCCGCTCCAGCGCG TCTTCGTGGGCCTCTCCCTCTCCATCGCCGGCATGGCCGTCGCCGCGGCCGTCGAGCGCC ACCGCGCCACCGCCTCCGCCTCCGCCGCCGCCGCCGCGCCCACGGTGTTCCTCCTCATGC CGCAGTTCCTCCTCGTCGGCGCCGGCGAGGCGTTCACCTACATGGGCCAGCTCGACTTCT TCCTCCGCGAGTGCCCCAAGGGGATGAAGACCATGAGCACGGGCCTCTTCCTCAGCACCT GCGCCATCGGCTTCTTCTTCAGCACGCTGCTCGTCACCATCGTCCACAAGGTCACCGGCC ATGGCGCCCGCGGCGGCGGCTGGCTCGCCGACAACCTCGACGACGGCAGGCTCGACTACT TCTACTGGCTGCTCGCCGTCATCAGCGCCATCAACCTCGTCCTCTTCACCGTCGCCGCCA GGGGGTACGTCTACAAGGAGAAGCGCCTCGCCGACGCCGGCATCGAGCTCGCCGACGAGG AGACCATCGCCGTCGGCCACTAATAGTGACCGATCGATGCGTCAGCATGACATACGCAAG CTAGCTACCAGTTAGCTGCACGCGTCGTGTATGTACGTCGTCCTTGTAATAACTTTGGTT TTTTCTTTTCTTGTATTTTGAATTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT CTTCTTCGTGTATTGTATTCGACGTATTTCGCCGGGTATAATTTGGGTGTATTCTCATCG CACGTATAATTAATTAATTAACCAACTACGTAATAACTACGTGGAGTT