Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0552600-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:21690332:21691088:-1 gene:Os10g0552600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 18 description:Similar to Tfm5 protein. (Os10t0552600-01)
Sequence

ATGGCGGCGAAGGCAGCGCTCGTTCTAGCGGTGAGCCTCCTGGTGGTGGCCGTGGCGAGC
GCCTGCACCTACTGCCCGGAGCCGCCGACGCCGAAGCCGAAGCCGCCGGCGCCGAGGCCG
CCGACGCCCGGCGGCGGCGCCGGGTCGTGCCCGCGCGACGCGCTGAAGCTGCACGTGTGC
GCCAACGTGCTCGGCCTCGTGAAGGCCAAGATCGGCGCGGTGGCGCCGTACGAGCCCTGC
TGCTCGCTGCTCGACGGCCTCGTCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCATC
AAGGCCAACGTGCTCGGCCTCAACCTCAACATCCCCATCGACCTCAGCCTCATCCTCAAC
AACTGCGGCAAGATCTGCCCATCCGACTACCAGTGTGCTTAA

Peptide Sequence

PEP ID

Os10t0552600-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:21690332:21691088:-1 gene:Os10g0552600 transcript:Os10t0552600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 18 description:Similar to Tfm5 protein. (Os10t0552600-01)
Sequence

MAAKAALVLAVSLLVVAVASACTYCPEPPTPKPKPPAPRPPTPGGGAGSCPRDALKLHVC
ANVLGLVKAKIGAVAPYEPCCSLLDGLVDLDAAVCLCTAIKANVLGLNLNIPIDLSLILN
NCGKICPSDYQCA

Transcript Sequence

Transcript ID

Os10t0552600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21690332:21691088:-1 gene:Os10g0552600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 18 description:Similar to Tfm5 protein. (Os10t0552600-01)
Sequence

ACACACAAAGCAAGAACCTCGAGCTGATCTACTAGCTACCTAGTACTCTCATCTTCTTCA
CTAGCTTTTGCTTGATCAATTGCAGCAATGGCGGCGAAGGCAGCGCTCGTTCTAGCGGTG
AGCCTCCTGGTGGTGGCCGTGGCGAGCGCCTGCACCTACTGCCCGGAGCCGCCGACGCCG
AAGCCGAAGCCGCCGGCGCCGAGGCCGCCGACGCCCGGCGGCGGCGCCGGGTCGTGCCCG
CGCGACGCGCTGAAGCTGCACGTGTGCGCCAACGTGCTCGGCCTCGTGAAGGCCAAGATC
GGCGCGGTGGCGCCGTACGAGCCCTGCTGCTCGCTGCTCGACGGCCTCGTCGACCTCGAC
GCCGCCGTCTGCCTCTGCACCGCCATCAAGGCCAACGTGCTCGGCCTCAACCTCAACATC
CCCATCGACCTCAGCCTCATCCTCAACAACTGCGGCAAGATCTGCCCATCCGACTACCAG
TGTGCTTAATCACATTGGGACACTGCAGCCGATCGATCGATCGATCGATTGACAGTGTGC
TACACGTCGTCTACATGTTTTTGTTGGTTGGTTTACTGTGAGCAGTCTGAACTCTCTGAA
CTTTGGAAACTGTCTGTTTTGTCTTTGTTTATGCTTGCAAAGTTTAATTAGTTCTGGGAA
AAAACCATTGGCCAGTATGTATTATTACATGTGTAAGTGTTGGTTGTGACCCCGGGTGAT
CAGTTTACTGGTCAATATATATGTATTTTTTGTGCTT