Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0552200-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:21670510:21671244:-1 gene:Os10g0552200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 16 description:Plant lipid transfer protein and hydrophobic protein, helical domain containing protein. (Os10t0552200-01)
Sequence	ATGGCTTCCACCAAGGTCGTCGCTCCCCTCCTCGCCCTCACCCTCCTGCTCTTCGCCGTC GCGGCGCACGGCTGTGAGCCCAACTGCTCCGGCGGTGGTCCGGTGATCCCGACGCCGACA ACGCCGTCGTACGACCGCCATGGCCACTGCCCCATCGACGCCCTGAAGCTGAGGGTGTGC GCCAACGTGCTCAATGGGCTCGTCGGCGTCAAGATCGGAGCCGGCCCCAACGAGTGCTGC TCGCTGCTGCAGGGGATCGCCGACCTCGACGCCGCCGTCTGCCTCTGCACCGCCGTCAAG GCCAACGTGCTGGGCATCAACCTGAATCTCCCCGTCGATCTGAGCCTCATCCTCAACAAG TGCAGCAAGATCTACCCATCCGGCTTCACCTGCTAA

Peptide Sequence

PEP ID	Os10t0552200-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:21670510:21671244:-1 gene:Os10g0552200 transcript:Os10t0552200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 16 description:Plant lipid transfer protein and hydrophobic protein, helical domain containing protein. (Os10t0552200-01)
Sequence	MASTKVVAPLLALTLLLFAVAAHGCEPNCSGGGPVIPTPTTPSYDRHGHCPIDALKLRVC ANVLNGLVGVKIGAGPNECCSLLQGIADLDAAVCLCTAVKANVLGINLNLPVDLSLILNK CSKIYPSGFTC

Transcript Sequence

Transcript ID	Os10t0552200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21670510:21671244:-1 gene:Os10g0552200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hybrid proline- or glycine-rich protein 16 description:Plant lipid transfer protein and hydrophobic protein, helical domain containing protein. (Os10t0552200-01)
Sequence	GCAAAGCAAACACAAGCTGAATTGAAGCAGCCTAGCTAGCTAATTAACACCACTAGCTAA TTAAGCTCGCTCGATCACTTCATCACTTAGCAATGGCTTCCACCAAGGTCGTCGCTCCCC TCCTCGCCCTCACCCTCCTGCTCTTCGCCGTCGCGGCGCACGGCTGTGAGCCCAACTGCT CCGGCGGTGGTCCGGTGATCCCGACGCCGACAACGCCGTCGTACGACCGCCATGGCCACT GCCCCATCGACGCCCTGAAGCTGAGGGTGTGCGCCAACGTGCTCAATGGGCTCGTCGGCG TCAAGATCGGAGCCGGCCCCAACGAGTGCTGCTCGCTGCTGCAGGGGATCGCCGACCTCG ACGCCGCCGTCTGCCTCTGCACCGCCGTCAAGGCCAACGTGCTGGGCATCAACCTGAATC TCCCCGTCGATCTGAGCCTCATCCTCAACAAGTGCAGCAAGATCTACCCATCCGGCTTCA CCTGCTAATTGAGCTCGATCGTGCATAATTAATCTTCATGCGATGACGAGGATTGATCTG AGTTGCATGATAAATTAAAGATTAATCTTGAAATAATTATATTGTTATTCACTTCTACAT TTTTGCAGCCCATTCTACATTGTACCTTACTTTATCATTCTTGAATTACTTAATTGTTGT AAGTTGTAACGCATTATAGCAATGTTGTTCTCCACATGATAATTGTTATATAGCTTGTCC TCCTTAATTTCTTTC