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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0551800-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:21658192:21658818:-1 gene:Os10g0551800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:root-specific RCc2, hybrid proline- or glycine-rich protein 13 description:Root-specific protein (RCc2 protein). (Os10t0551800-00)
Sequence

ATGGCTGCTTCCAAGGTCGCTCCCGTCCTGGCCCTGAGCCTCCTCCTCCTCGCCGTCGCG
GCGCACGGCTGCGAGCCCCACTGCTCCGGCGGCGGCGCGCCGGCGGTCGTCATACCGACG
CCGACGGTGGTGGTGCCACTGCCGTCGTTCGGCGGCGCCCATGGCGGCTACGGCGGCTAC
GGCCATGGCCGCTGCCCGATCGACGCGCTGAAGCTGCGGGTGTGCGCCAACGTGCTCAAC
GGCGCGCTCGGCGTGAACGTCGGCCATGGCCCCTACGACTGCTGCCCGCTGCTCGCCGGC
CTCGCCGACGCCGACGCCGCCGTCTGCCTCTGCACCGCCGTGAAGGCCAACGTGCTCGGC
GTCAACCTCAACGTCCCCGTCGAGCTCAAGCTCATCCTCAACAAGTGCGGCAAGACCTGC
CCCTCCGACTTCACCTGCTAA

Peptide Sequence

PEP ID

Os10t0551800-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:21658192:21658818:-1 gene:Os10g0551800 transcript:Os10t0551800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:root-specific RCc2, hybrid proline- or glycine-rich protein 13 description:Root-specific protein (RCc2 protein). (Os10t0551800-00)
Sequence

MAASKVAPVLALSLLLLAVAAHGCEPHCSGGGAPAVVIPTPTVVVPLPSFGGAHGGYGGY
GHGRCPIDALKLRVCANVLNGALGVNVGHGPYDCCPLLAGLADADAAVCLCTAVKANVLG
VNLNVPVELKLILNKCGKTCPSDFTC

Transcript Sequence

Transcript ID

Os10t0551800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21658192:21658818:-1 gene:Os10g0551800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:root-specific RCc2, hybrid proline- or glycine-rich protein 13 description:Root-specific protein (RCc2 protein). (Os10t0551800-00)
Sequence

CGATCGATCACTAGCTCGCTAGCTGCATCCATGGCTGCTTCCAAGGTCGCTCCCGTCCTG
GCCCTGAGCCTCCTCCTCCTCGCCGTCGCGGCGCACGGCTGCGAGCCCCACTGCTCCGGC
GGCGGCGCGCCGGCGGTCGTCATACCGACGCCGACGGTGGTGGTGCCACTGCCGTCGTTC
GGCGGCGCCCATGGCGGCTACGGCGGCTACGGCCATGGCCGCTGCCCGATCGACGCGCTG
AAGCTGCGGGTGTGCGCCAACGTGCTCAACGGCGCGCTCGGCGTGAACGTCGGCCATGGC
CCCTACGACTGCTGCCCGCTGCTCGCCGGCCTCGCCGACGCCGACGCCGCCGTCTGCCTC
TGCACCGCCGTGAAGGCCAACGTGCTCGGCGTCAACCTCAACGTCCCCGTCGAGCTCAAG
CTCATCCTCAACAAGTGCGGCAAGACCTGCCCCTCCGACTTCACCTGCTAATTAATTGAG
CATGGAAAGTGCTCAAACCATTTGCGCAAAATTAATGCATATTTATATTATATTTAATTG
AGTTTGTTTTCATGCAATGGCCATTGGTAAGTTGCATGATGCATGAGTAAGCCGGCCTGA
ATAAGCTATTATCCCCCCTTGTGTTAG