Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0548900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:21482740:21486300:-1 gene:Os10g0548900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MURE description:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase domain containing protein. (Os10t0548900-01);Similar to MURE; ATP binding / acid-amino acid ligase/ ligase. (Os10t0548900-02)
Sequence	ATGGCGACGGCCCCGCTCGCCTTCCACCTCCCATTCCCCTTCCCCTCCGCCTCCCGCCCG CCGCCTAGACTTCTACCCCCCTCACGCCGCCCTCCCGCCGCCCGCCTCGCCGCCACGCGC CGCTTCCGCCCGCCCACCGCCGACGACGAGCCCCCCGAGGCGGCGGAGGACTCCTCCCAC GGCCTCAACCGCTACGACCAGCTCACCCGCCACGTCGAGCGCGCCCGCCGGCGCCAGCAG GCCGAGCAGCCGGAGATCACCCCCGACCACCCGCTCTTCTCGTCCCCTCCTTCCTCCGGG GAGGCCGGCAGCTACGACCCCGACGACGAGTTCTTCGATGAGATCGACCGCGCGATTGCC GAGAAGCGGGAGGAGTTCACGCGGCGTGGGCTGATCAAGCCGTCCGCCCCGGCGCCCTCG CAGCCCGAGGAGGAGGACGGCCTCGCCGACGAGCTCTCCCCCGAAGAGGTCATCGACCTC GACGAGATTCGGAGGCTGCAGGGACTCAGTGTCGTGTCCCTGGCCGACGAGGAGGACGAG GAGGCGAACGGCGGCGGTGGCGGGGTGGATTACGGCGACGACGGGGTGCCCCTCGACGAC GACGGCGAGGTGTTCGATGTGGCCGATGAGGTCGGCCTCGAGGGGGCGAGGGTGCGGTAC CCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGAGAGCAAGCTCGTGCCCGTGGCG GTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCAGCGTGACGCCAGCCTCGTCGCG GCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCTTGCTGGGCTCACCGAAGCTGAC AAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGTCGACATCGAGGGCACCCTTGCT TGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGCTCTCCGCATGCTCCCCGCCTGC CTCTACAGGCGGCCTTCGAAAGACATGGCGGTGATCGGTGTCGCTGGCACGGATGGGGTC ACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGCCATGGGTGTGAGGACTGGCATG GTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAAACTGGACGCACAACCTGATGCC TCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGACGATGTTGTACAATGGCGCTGAG GCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTCATCTGGTGTGGACAGCGAGATA GATTATGACATTGCTGTGCTGACTAATGTTAGGCATGCCGGCGATGAGGCTGGCATGACC TACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTCTAGAATGGTTGACCCTGAGCGC CATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCCATTCTTTGCTGCACAGGGAGGG CAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAAGAAGGCTGATGTGCACACTCTG AAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGTACAGACACCACATGGGATCCTC GAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTATAACATCCTTGCATCTGTAGCA GTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGTGAAGGGCATCGAAGAGGTGGAT GCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCAAGCATTTGGGGTGATCGTTGAT CATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGATGGTGTAAAGGAACTGGGCCCA CGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCGAGAAAGAGGGAAGAGGCCAGTG ATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTATGTTGACATCCGACAACCCAGCA AATGAAGATCCATTGGATATCCTGGATGATATGCTGGCGGGAGTAGGGTGGACCATGGAA GAATACTTGAAGCATGGCACAAATGATTATTACCCACCACTGCCGAATGGACATAGGATA TTCCTACATGATATTAGAAGAGTTGCTGTACGAGCTGCTGTCGCGATGGGTGAACAAGGA GATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTATCAGATTGAAGTCGATAAAAAG GAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTTACAATATGTTGATCAATTGCAT CGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTTACCTGAAAGCCACTGA

Peptide Sequence

PEP ID	Os10t0548900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:21482740:21486300:-1 gene:Os10g0548900 transcript:Os10t0548900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MURE description:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase domain containing protein. (Os10t0548900-01);Similar to MURE; ATP binding / acid-amino acid ligase/ ligase. (Os10t0548900-02)
Sequence	MATAPLAFHLPFPFPSASRPPPRLLPPSRRPPAARLAATRRFRPPTADDEPPEAAEDSSH GLNRYDQLTRHVERARRRQQAEQPEITPDHPLFSSPPSSGEAGSYDPDDEFFDEIDRAIA EKREEFTRRGLIKPSAPAPSQPEEEDGLADELSPEEVIDLDEIRRLQGLSVVSLADEEDE EANGGGGGVDYGDDGVPLDDDGEVFDVADEVGLEGARVRYPAFRMTLAELLDESKLVPVA VTGDQDVALAGVQRDASLVAAGDLYVCVGEEGLAGLTEADKRGAVAVVADQTVDIEGTLA CRALVIVDDITAALRMLPACLYRRPSKDMAVIGVAGTDGVTTTAHLVRAMYEAMGVRTGM VGVLGAYAFGNNKLDAQPDASGDPIAVQRLMATMLYNGAEAALLEATTDGMPSSGVDSEI DYDIAVLTNVRHAGDEAGMTYEEYMNSMASLFSRMVDPERHRKVVNIDDPSAPFFAAQGG QDVPVVTYSFENKKADVHTLKYQLSLFETEVLVQTPHGILEISSGLLGRDNIYNILASVA VGVAVGAPLEDIVKGIEEVDAIPGRCELIDEEQAFGVIVDHARTPESLSRLLDGVKELGP RRIVTVIGCCGERERGKRPVMTKVAAEKSDVVMLTSDNPANEDPLDILDDMLAGVGWTME EYLKHGTNDYYPPLPNGHRIFLHDIRRVAVRAAVAMGEQGDVVVITGKGNDTYQIEVDKK EFFDDREECREALQYVDQLHRAGIDTSEFPWRLPESH

Transcript Sequence

Transcript ID	Os10t0548900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21482740:21486300:-1 gene:Os10g0548900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MURE description:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase domain containing protein. (Os10t0548900-01);Similar to MURE; ATP binding / acid-amino acid ligase/ ligase. (Os10t0548900-02)
Sequence	ACCCCCCCTCCTCCCGCCTCCCATGGCGACGGCCCCGCTCGCCTTCCACCTCCCATTCCC CTTCCCCTCCGCCTCCCGCCCGCCGCCTAGACTTCTACCCCCCTCACGCCGCCCTCCCGC CGCCCGCCTCGCCGCCACGCGCCGCTTCCGCCCGCCCACCGCCGACGACGAGCCCCCCGA GGCGGCGGAGGACTCCTCCCACGGCCTCAACCGCTACGACCAGCTCACCCGCCACGTCGA GCGCGCCCGCCGGCGCCAGCAGGCCGAGCAGCCGGAGATCACCCCCGACCACCCGCTCTT CTCGTCCCCTCCTTCCTCCGGGGAGGCCGGCAGCTACGACCCCGACGACGAGTTCTTCGA TGAGATCGACCGCGCGATTGCCGAGAAGCGGGAGGAGTTCACGCGGCGTGGGCTGATCAA GCCGTCCGCCCCGGCGCCCTCGCAGCCCGAGGAGGAGGACGGCCTCGCCGACGAGCTCTC CCCCGAAGAGGTCATCGACCTCGACGAGATTCGGAGGCTGCAGGGACTCAGTGTCGTGTC CCTGGCCGACGAGGAGGACGAGGAGGCGAACGGCGGCGGTGGCGGGGTGGATTACGGCGA CGACGGGGTGCCCCTCGACGACGACGGCGAGGTGTTCGATGTGGCCGATGAGGTCGGCCT CGAGGGGGCGAGGGTGCGGTACCCGGCCTTCCGCATGACGCTGGCCGAGCTCCTGGACGA GAGCAAGCTCGTGCCCGTGGCGGTGACCGGCGACCAGGATGTCGCGCTCGCCGGGGTGCA GCGTGACGCCAGCCTCGTCGCGGCGGGGGACCTCTACGTGTGCGTTGGGGAGGAAGGGCT TGCTGGGCTCACCGAAGCTGACAAGCGCGGGGCGGTCGCCGTCGTCGCCGACCAGACCGT CGACATCGAGGGCACCCTTGCTTGCCGCGCGCTGGTCATCGTCGATGACATCACGGCAGC TCTCCGCATGCTCCCCGCCTGCCTCTACAGGCGGCCTTCGAAAGACATGGCGGTGATCGG TGTCGCTGGCACGGATGGGGTCACCACCACGGCGCACCTCGTCAGGGCAATGTATGAAGC CATGGGTGTGAGGACTGGCATGGTAGGCGTTCTCGGGGCCTATGCGTTTGGCAACAACAA ACTGGACGCACAACCTGATGCCTCTGGTGACCCCATTGCCGTGCAGAGGCTGATGGCGAC GATGTTGTACAATGGCGCTGAGGCGGCTTTGTTGGAGGCAACCACCGATGGTATGCCGTC ATCTGGTGTGGACAGCGAGATAGATTATGACATTGCTGTGCTGACTAATGTTAGGCATGC CGGCGATGAGGCTGGCATGACCTACGAGGAGTACATGAACAGCATGGCCTCTCTGTTTTC TAGAATGGTTGACCCTGAGCGCCATCGTAAGGTGGTGAACATTGATGATCCAAGTGCTCC ATTCTTTGCTGCACAGGGAGGGCAAGATGTTCCTGTGGTGACATATTCATTTGAGAACAA GAAGGCTGATGTGCACACTCTGAAGTATCAGCTTTCCCTGTTTGAAACGGAGGTCCTGGT ACAGACACCACATGGGATCCTCGAGATTTCGTCAGGCCTTCTTGGGAGGGACAACATCTA TAACATCCTTGCATCTGTAGCAGTTGGTGTTGCTGTCGGTGCACCACTGGAAGACATAGT GAAGGGCATCGAAGAGGTGGATGCAATTCCAGGCCGGTGTGAGCTAATTGATGAGGAGCA AGCATTTGGGGTGATCGTTGATCATGCAAGGACTCCAGAGTCTCTTTCGAGGCTTTTGGA TGGTGTAAAGGAACTGGGCCCACGTCGAATTGTCACAGTTATTGGATGTTGTGGTGAGCG AGAAAGAGGGAAGAGGCCAGTGATGACAAAAGTTGCAGCTGAGAAAAGTGATGTTGTTAT GTTGACATCCGACAACCCAGCAAATGAAGATCCATTGGATATCCTGGATGATATGCTGGC GGGAGTAGGGTGGACCATGGAAGAATACTTGAAGCATGGCACAAATGATTATTACCCACC ACTGCCGAATGGACATAGGATATTCCTACATGATATTAGAAGAGTTGCTGTACGAGCTGC TGTCGCGATGGGTGAACAAGGAGATGTAGTTGTTATCACTGGGAAAGGGAATGATACTTA TCAGATTGAAGTCGATAAAAAGGAGTTCTTTGATGATAGGGAAGAATGCCGAGAAGCCTT ACAATATGTTGATCAATTGCATCGAGCTGGAATAGACACCTCAGAATTTCCATGGAGGTT ACCTGAAAGCCACTGATTCTGATGTATTCAATATAGCCGGGCTTCTTCTTTGCTTGCTCA AGGAGCAGCATTTTAGATTCTCCCTTTTTGCTATGGTAGGATGTACTTCAGACCAGCGGG TGCTCAAGGTTGACTACTTGACCCCCAGTACTAACTGCTAACTTCTCAGTGATACTCAGT AGGTACAAAATATATGCAATGCAGCTTCCCCTTAATTTCTGCTGCC