Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0548800-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:21473597:21477243:-1 gene:Os10g0548800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast outer envelope protein-like (Chloroplast outer envelope membrane-associated protein Toc120). (Os10t0548800-01)
Sequence	ATGGAGAGCGGCGGGGTCGACGGCGAGAGGCCCCTGCTGCGCGAGGCGGGGGATTTGGGT GGCGAGGACGGCGGCGCAGGCGGAGTCCCCGAGGAGGGGGATGCGAAGGGCGATGTGATG GCGGCGGCGGCGGCGCAGGGGGGCGATGGCGATGAGGGTGTGGAGGCGGTAGATGGGGAC GGGAGTAACGAGGAGGAGGAGGTTGTGCAGACGCCCGATGTGAAGCAGACGCCCGGCGCC GCGGCCGCGGCGGCCTGGCGGGAGGCGGCGTGGGAGGAGGCTGACGGCGAGGAGTTCGTG GATGTCTTGGAAGGGGACGTGGATGAGAAGCGTGAGGATGGATCGGCCTTGGAGAATGGG GAGGATTTGTTGGCCTCCCGTTCTCTCGCTGTCGAGGGTGACGAAGAAGGGTATGGTTCT TGTGCTGATATTGGTATAGAAGAAGACGCTGAGGGTGATGCGAGTCGGGAGCGCTTGGAG GAGGAAGCCATGACGGAATCAATCAGGGAGTATGTGACAGAAGCTGTTTTGGCTGACCAT ATCCAGGAGCAACCGGACAAATCGAAGAGTGAATCTGAACATGTGAAGGTTGCTCAGCAC AAGTCGCAGATTGCGAAGAGCAGGGAAGAGGGACCCAAACAATCTGGAGGCGAACCGTCC GTTGTTGTCGAGGAATTGAATGGATCAAGCTCGTCTGATGATGAGAGTAAAGCTACCTCC GCTCCTCCTGCACGATCCATTAGTGGTGCTGCAGGTCGTTCTAATGGCCCCTCTTTGCCA TCTCGTCCTGCTGGGCTTGGAGCATCGACTTCCTTGTCGCAGCCCTCAGCTCGACCTGTT CAGCAGACCCGCGCTAATGGTCCAGTCGCTGTGGACAGAGAAACTCGGCAGGATGTTGAA TCTCCTGAGGATGGAGACGAAAATGATGAAATCCGTGAGAAACTCCAGATGATCCGGGTT AAGTTTCTGCGTCTTGCTAACAGGTTTGGGCAAACACCTAATAATATGGTGGTTTCTCAG GTTCTTTACCGACTTGGGCTGGCAGAACAGCTTAGAAGAAATACAGGCCAGGGTGTTTTT AGTTTTGACCGGGCACAAGATATGGCAGAACGTCTTGAAGCTGCTGGAAACGAGCCCCTT GATTTTTCTTGCACCATCTTGGTTCTTGGTAAAACTGGGGTTGGCAAGAGTGCTACCATC AATTCTATTTTTGATGATGTCCGGTTGGAAACAAATGCTTTTGATACCAGCACTAGAAAG GTTCAAGAAGTAGTTGGTGCAGTTGAGGGAATCAAAGTAAAAGTTATCGATACTCCTGGC CTGTCATGCTCATCTTCAGACCAGCACCACAACCAGAAGATTCTCAATTCTGTCAAGCGA CTTATCAGCAGAAACCCTCCTGATATTGTTCTTTATTTTGATAGACTGGATATGCAGACC AGGGACTATGGTGATGTGCCTCTTCTGCAAACCATTACAAGAGTCTTTGGAGCATCAATC TGGTTCAATGCCATAGTTGTGCTAACTCATGCTGCATCTGCACCACCTGATGGTCTGAAT GGAATTCCCCTGAGCTATGAGATGTTTGTAACCCAAAGGTCTCATGTAGTCCAGCAAGCT ATAAGGCAAGCCGCTGGTGATGTCCGTCTTATGAATCCAGTGTCCCTGGTTGAAAACCAC TCAGCGTGCAGGACCAATAGGGCAGGCCAGAGGGTGTTGCCAAATGGGCATGTCTGGAAA CCACAGTTGCTATTGCTTTGTTTTGCCTCAAAGGTTTTAGCAGAGGCCAACGCGCTTCTC AAGCTGCAGGACAATCCTGCTGGTAAACCTCGTATGAGGATTCCTCCACTTCCTTTCCTA TTGTCTTCGCTTCTTCAGTCTCGAGCCCCACTGAAGTTACCAGAGGAGCAGTTTGGTGAT GATGATGATATTGAAGACGATTTGGCTGATGATTCGGATTCAGATGATGGTTCAGACTAT GATGACTTGCCTCCTTTTAAACGCCTCACAAAAGCTCAGCTTGCAAAGCTAAACCATGCT CAGAGGAAGGCATATCTTGAGGAGCTGGATTACAGAGAGAAGTTATTCTACAAAAAACAG CTAAAGGAGGAAAGGATGCGCCGTAAAATAATGAAGAAAATGGCAGCAGAGGCCAGTGCA AGAACAGATGACTTCAGTAACAGCAATCTTGAAGATGATGGCAGTGCTCCAACAAATGTT GCAGTGCCTATGCCCGACATGGTATTGCCCTCATCGTTTGATTCTGACCATCCTAGCCAT CGCTATCGTTTCCTGGACACACCAAGTGAATGGCTTGTCAGGCCAGTGCTGGAGACCCAG GGATGGGATCATGATGTTGGTTATGAAGGTCTAAATGTTGAAAGGTTGTTTGCTGTGAAA GGTAAAGTTCCTTTATCAGTGTCTGGTCAACTTTCAAAAGACAAGAAGGATTGCTCCCTC CAAATGGAGGTCGCAAGTTCACTTAAGCACGGTGAGGGGAAAACCACTTCACTGGGGCTT GATTTGCAGTCTGTTGGCAAGGACATGGCATACACTCTTCGTGGCGAGTCGAGGTTTAAA AACTTCAGGCGCAATAACACGGCTGCTGGGATATCCGCCACACTCCTTGGAGATTCTGTA TCCGCTGGTGTGAAGGTTGAAGACAAGCTTGTTGTGAACAAGCAGCTCAGGGTTCTGGTT AGTGGAGGCGCTATGAGCGGGAGGGGAGATGTGGCTTACGGAGGGCGGCTTGAAGCAACA TTGAAAGACAAAGATTACCCAATTGGCCGCATGCTTTCTACCATAGCGCTCTCTGTTGTT GATTGGCATGGGGATCTTGCTGTTGGCTGCAACATCCAGTCTCAGATTCCTGCTGGAAGA GCTAGCAATTTGATTGGTCATGCGAATCTAAGCAACAAGGGAACTGGTCAAGTTGGCATT CGCCTCAACAGCTCGGAGCATCTTGAGATCGCCCTTATTGCCCTCGTGCCAATATACCAA AACATCAAGAAGTTATTGCAGAGTTAA

Peptide Sequence

PEP ID	Os10t0548800-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:21473597:21477243:-1 gene:Os10g0548800 transcript:Os10t0548800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast outer envelope protein-like (Chloroplast outer envelope membrane-associated protein Toc120). (Os10t0548800-01)
Sequence	MESGGVDGERPLLREAGDLGGEDGGAGGVPEEGDAKGDVMAAAAAQGGDGDEGVEAVDGD GSNEEEEVVQTPDVKQTPGAAAAAAWREAAWEEADGEEFVDVLEGDVDEKREDGSALENG EDLLASRSLAVEGDEEGYGSCADIGIEEDAEGDASRERLEEEAMTESIREYVTEAVLADH IQEQPDKSKSESEHVKVAQHKSQIAKSREEGPKQSGGEPSVVVEELNGSSSSDDESKATS APPARSISGAAGRSNGPSLPSRPAGLGASTSLSQPSARPVQQTRANGPVAVDRETRQDVE SPEDGDENDEIREKLQMIRVKFLRLANRFGQTPNNMVVSQVLYRLGLAEQLRRNTGQGVF SFDRAQDMAERLEAAGNEPLDFSCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRK VQEVVGAVEGIKVKVIDTPGLSCSSSDQHHNQKILNSVKRLISRNPPDIVLYFDRLDMQT RDYGDVPLLQTITRVFGASIWFNAIVVLTHAASAPPDGLNGIPLSYEMFVTQRSHVVQQA IRQAAGDVRLMNPVSLVENHSACRTNRAGQRVLPNGHVWKPQLLLLCFASKVLAEANALL KLQDNPAGKPRMRIPPLPFLLSSLLQSRAPLKLPEEQFGDDDDIEDDLADDSDSDDGSDY DDLPPFKRLTKAQLAKLNHAQRKAYLEELDYREKLFYKKQLKEERMRRKIMKKMAAEASA RTDDFSNSNLEDDGSAPTNVAVPMPDMVLPSSFDSDHPSHRYRFLDTPSEWLVRPVLETQ GWDHDVGYEGLNVERLFAVKGKVPLSVSGQLSKDKKDCSLQMEVASSLKHGEGKTTSLGL DLQSVGKDMAYTLRGESRFKNFRRNNTAAGISATLLGDSVSAGVKVEDKLVVNKQLRVLV SGGAMSGRGDVAYGGRLEATLKDKDYPIGRMLSTIALSVVDWHGDLAVGCNIQSQIPAGR ASNLIGHANLSNKGTGQVGIRLNSSEHLEIALIALVPIYQNIKKLLQS

Transcript Sequence

Transcript ID	Os10t0548800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21473597:21477243:-1 gene:Os10g0548800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Chloroplast outer envelope protein-like (Chloroplast outer envelope membrane-associated protein Toc120). (Os10t0548800-01)
Sequence	GTTCCCCTGAGGCCTGATCACCACCCTCTCTCCTCCCCTTTCCCTGACCCCGCGACCGCG CCGCGCGAGGCGAACTCGCCACTCCGATCTCTCTCTCCGGCGACGCCGCCGCCGCCGCAC AGGGTTTTGCTCTCTCTCGCGCGGAATGGAGAGCGGCGGGGTCGACGGCGAGAGGCCCCT GCTGCGCGAGGCGGGGGATTTGGGTGGCGAGGACGGCGGCGCAGGCGGAGTCCCCGAGGA GGGGGATGCGAAGGGCGATGTGATGGCGGCGGCGGCGGCGCAGGGGGGCGATGGCGATGA GGGTGTGGAGGCGGTAGATGGGGACGGGAGTAACGAGGAGGAGGAGGTTGTGCAGACGCC CGATGTGAAGCAGACGCCCGGCGCCGCGGCCGCGGCGGCCTGGCGGGAGGCGGCGTGGGA GGAGGCTGACGGCGAGGAGTTCGTGGATGTCTTGGAAGGGGACGTGGATGAGAAGCGTGA GGATGGATCGGCCTTGGAGAATGGGGAGGATTTGTTGGCCTCCCGTTCTCTCGCTGTCGA GGGTGACGAAGAAGGGTATGGTTCTTGTGCTGATATTGGTATAGAAGAAGACGCTGAGGG TGATGCGAGTCGGGAGCGCTTGGAGGAGGAAGCCATGACGGAATCAATCAGGGAGTATGT GACAGAAGCTGTTTTGGCTGACCATATCCAGGAGCAACCGGACAAATCGAAGAGTGAATC TGAACATGTGAAGGTTGCTCAGCACAAGTCGCAGATTGCGAAGAGCAGGGAAGAGGGACC CAAACAATCTGGAGGCGAACCGTCCGTTGTTGTCGAGGAATTGAATGGATCAAGCTCGTC TGATGATGAGAGTAAAGCTACCTCCGCTCCTCCTGCACGATCCATTAGTGGTGCTGCAGG TCGTTCTAATGGCCCCTCTTTGCCATCTCGTCCTGCTGGGCTTGGAGCATCGACTTCCTT GTCGCAGCCCTCAGCTCGACCTGTTCAGCAGACCCGCGCTAATGGTCCAGTCGCTGTGGA CAGAGAAACTCGGCAGGATGTTGAATCTCCTGAGGATGGAGACGAAAATGATGAAATCCG TGAGAAACTCCAGATGATCCGGGTTAAGTTTCTGCGTCTTGCTAACAGGTTTGGGCAAAC ACCTAATAATATGGTGGTTTCTCAGGTTCTTTACCGACTTGGGCTGGCAGAACAGCTTAG AAGAAATACAGGCCAGGGTGTTTTTAGTTTTGACCGGGCACAAGATATGGCAGAACGTCT TGAAGCTGCTGGAAACGAGCCCCTTGATTTTTCTTGCACCATCTTGGTTCTTGGTAAAAC TGGGGTTGGCAAGAGTGCTACCATCAATTCTATTTTTGATGATGTCCGGTTGGAAACAAA TGCTTTTGATACCAGCACTAGAAAGGTTCAAGAAGTAGTTGGTGCAGTTGAGGGAATCAA AGTAAAAGTTATCGATACTCCTGGCCTGTCATGCTCATCTTCAGACCAGCACCACAACCA GAAGATTCTCAATTCTGTCAAGCGACTTATCAGCAGAAACCCTCCTGATATTGTTCTTTA TTTTGATAGACTGGATATGCAGACCAGGGACTATGGTGATGTGCCTCTTCTGCAAACCAT TACAAGAGTCTTTGGAGCATCAATCTGGTTCAATGCCATAGTTGTGCTAACTCATGCTGC ATCTGCACCACCTGATGGTCTGAATGGAATTCCCCTGAGCTATGAGATGTTTGTAACCCA AAGGTCTCATGTAGTCCAGCAAGCTATAAGGCAAGCCGCTGGTGATGTCCGTCTTATGAA TCCAGTGTCCCTGGTTGAAAACCACTCAGCGTGCAGGACCAATAGGGCAGGCCAGAGGGT GTTGCCAAATGGGCATGTCTGGAAACCACAGTTGCTATTGCTTTGTTTTGCCTCAAAGGT TTTAGCAGAGGCCAACGCGCTTCTCAAGCTGCAGGACAATCCTGCTGGTAAACCTCGTAT GAGGATTCCTCCACTTCCTTTCCTATTGTCTTCGCTTCTTCAGTCTCGAGCCCCACTGAA GTTACCAGAGGAGCAGTTTGGTGATGATGATGATATTGAAGACGATTTGGCTGATGATTC GGATTCAGATGATGGTTCAGACTATGATGACTTGCCTCCTTTTAAACGCCTCACAAAAGC TCAGCTTGCAAAGCTAAACCATGCTCAGAGGAAGGCATATCTTGAGGAGCTGGATTACAG AGAGAAGTTATTCTACAAAAAACAGCTAAAGGAGGAAAGGATGCGCCGTAAAATAATGAA GAAAATGGCAGCAGAGGCCAGTGCAAGAACAGATGACTTCAGTAACAGCAATCTTGAAGA TGATGGCAGTGCTCCAACAAATGTTGCAGTGCCTATGCCCGACATGGTATTGCCCTCATC GTTTGATTCTGACCATCCTAGCCATCGCTATCGTTTCCTGGACACACCAAGTGAATGGCT TGTCAGGCCAGTGCTGGAGACCCAGGGATGGGATCATGATGTTGGTTATGAAGGTCTAAA TGTTGAAAGGTTGTTTGCTGTGAAAGGTAAAGTTCCTTTATCAGTGTCTGGTCAACTTTC AAAAGACAAGAAGGATTGCTCCCTCCAAATGGAGGTCGCAAGTTCACTTAAGCACGGTGA GGGGAAAACCACTTCACTGGGGCTTGATTTGCAGTCTGTTGGCAAGGACATGGCATACAC TCTTCGTGGCGAGTCGAGGTTTAAAAACTTCAGGCGCAATAACACGGCTGCTGGGATATC CGCCACACTCCTTGGAGATTCTGTATCCGCTGGTGTGAAGGTTGAAGACAAGCTTGTTGT GAACAAGCAGCTCAGGGTTCTGGTTAGTGGAGGCGCTATGAGCGGGAGGGGAGATGTGGC TTACGGAGGGCGGCTTGAAGCAACATTGAAAGACAAAGATTACCCAATTGGCCGCATGCT TTCTACCATAGCGCTCTCTGTTGTTGATTGGCATGGGGATCTTGCTGTTGGCTGCAACAT CCAGTCTCAGATTCCTGCTGGAAGAGCTAGCAATTTGATTGGTCATGCGAATCTAAGCAA CAAGGGAACTGGTCAAGTTGGCATTCGCCTCAACAGCTCGGAGCATCTTGAGATCGCCCT TATTGCCCTCGTGCCAATATACCAAAACATCAAGAAGTTATTGCAGAGTTAATCCGTATC AACCAGTATTTATGTAAGCGAGAAAAGGCAGCAAGATAAATCCATTAGAGTTAATGCAAG CATAAATTAGAACTAGAGTTAATGCAAGCATAAATTAGAACTATCTATTTATTTTCTTCT TCCCTTACCTACACGTAATAGTGTTTTCTTCCAAGTTTTTTTTTTTTTGATGAAGTTGGA TTTGCAGAACACATCCTTTTCAGGATTTTTGTTGTTATCCTTGTACTCTCAATAGCTGAT AAGAAAAAAAAATGCACTGCTGTTTTGAAGGCTGCAACCGCCG