Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0547500-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:21417294:21419832:1 gene:Os10g0547500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 3 description:Divalent ion symporter domain containing protein. (Os10t0547500-01)
Sequence	ATGGCGCTGGCGTCGCTGCCGAAGGTGGTGATGGGGTCGGTGGCGTTCGGTGTGTTCTGG ATGCTGGCGGTGTTCCCGTCGGTGCCGTTCCTGCCGATCGGGCGGACGGCGGGGGCGCTG CTGGGCGCGGTGCTGATGATCGTGTTCCACGTGATCAGCGCCGACGACGCCTACGCCTCC ATCGACCTCCCCATCCTGGGCCTCCTCTTCGCCACCATGGTCGTCGGCGGCTACCTCAAG AACGCCGGCATGTTCAGGCACCTGGGCCGGCTGCTGGCGTGGCGGAGCCAGGGCGGGCGC GACCTCATGTGCCGCGTCTGCGTCGTCACCGCGCTCGCCAGCGCGCTCTTCACCAACGAC ACCTGCTGCGTCGTCCTCACCGAGTTCGTGCTCGAGCTCGCCGCCGAGCGCAACCTCCCG GCGAAGCCGTTCCTGCTCGCGCTCGCCACCAGCGCCAACATCGGCTCCAGCGCGACGCCC ATCGGCAACCCGCAGAACCTGGTCATCGCCTTCAACAGCAAGATCTCCTTTATTTCCTTC CTCCTCGGCATCCTCCCCGCCATGCTCGCCGGCATGGGGATCAACATGCTCATGCTGCTC TGCATGTACTGGAAGGAGCTCGACGGCGGCGCCTGCAGCCCCGACGAGGTCGCCGCCGGC AAGCAGATGGAGGCCATCGAGGAGGGCCGCCGCACGGCGCTCAACAACAACAAGAAAGAC GACGGCGACGCCGCCACCCCCGCATCGCCGGAGGACGACGACGGCGGCGACGCCGAGTCG ATGATGTCGGAGAACATCTCGACGAAGCACCGGTGGTTCATGCAGTGCTCGGAGCACCGG CGGAAGCTGTTCCTCAAGAGCTTCGCGTACGTGGTCACCGTCGGCATGCTCGTCGCCTAC ATGCTCGGCCTCAACATGTCGTGGACCGCCATCACGACCGCCATCGCCCTCGTCGTCGTC GACTTCCGCGACGCCGAGCCATGCCTCGACAAGGTGTCGTACTCGCTGCTGGTGTTCTTC TCGGGGATGTTCGTGACGGTGAGCGGGTTCAACAAGACGGGGCTACCCGGGGCCATCTGG AACGTGATGGCGCCCTACTCAAAGATCAACCACGTCACCGGCGTCACCGTCCTCTCCGTC ATCATCCTCCTCCTCTCCAACCTCGCCTCCAACGTCCCCACCGTGTTGTTGATGGGGGAT GAGGTGGCGGCGGCGGCGGCGACGATATCACCGGCGGCGGTGACGCGGTCGTGGCTGCTG CTGGCGTGGGTGAGCACGGTGGCGGGGAACCTGTCGCTGCTGGGGTCGGCGGCGAACCTG ATCGTGTGCGAGCAGGCGAGGCGGGCGACGCGCAACGCCTACGACCTCACCTTCTGGAAC CACGTCATCTTCGGACTCCCATCCACCCTCGTCGTCACCGCCATCGGCATCCCTCTCATC GGCAAGATCAACATCTAG

Peptide Sequence

PEP ID	Os10t0547500-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:21417294:21419832:1 gene:Os10g0547500 transcript:Os10t0547500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 3 description:Divalent ion symporter domain containing protein. (Os10t0547500-01)
Sequence	MALASLPKVVMGSVAFGVFWMLAVFPSVPFLPIGRTAGALLGAVLMIVFHVISADDAYAS IDLPILGLLFATMVVGGYLKNAGMFRHLGRLLAWRSQGGRDLMCRVCVVTALASALFTND TCCVVLTEFVLELAAERNLPAKPFLLALATSANIGSSATPIGNPQNLVIAFNSKISFISF LLGILPAMLAGMGINMLMLLCMYWKELDGGACSPDEVAAGKQMEAIEEGRRTALNNNKKD DGDAATPASPEDDDGGDAESMMSENISTKHRWFMQCSEHRRKLFLKSFAYVVTVGMLVAY MLGLNMSWTAITTAIALVVVDFRDAEPCLDKVSYSLLVFFSGMFVTVSGFNKTGLPGAIW NVMAPYSKINHVTGVTVLSVIILLLSNLASNVPTVLLMGDEVAAAAATISPAAVTRSWLL LAWVSTVAGNLSLLGSAANLIVCEQARRATRNAYDLTFWNHVIFGLPSTLVVTAIGIPLI GKINI

Transcript Sequence

Transcript ID	Os10t0547500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21417294:21419832:1 gene:Os10g0547500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LOW SILICON RICE 3 description:Divalent ion symporter domain containing protein. (Os10t0547500-01)
Sequence	CTCTCATCGCCACCACCACCTCCCACTCCAAGACGCTAGCTGCATTGTAGTGAGAGAGAG AGGCGGCCATGGCGCTGGCGTCGCTGCCGAAGGTGGTGATGGGGTCGGTGGCGTTCGGTG TGTTCTGGATGCTGGCGGTGTTCCCGTCGGTGCCGTTCCTGCCGATCGGGCGGACGGCGG GGGCGCTGCTGGGCGCGGTGCTGATGATCGTGTTCCACGTGATCAGCGCCGACGACGCCT ACGCCTCCATCGACCTCCCCATCCTGGGCCTCCTCTTCGCCACCATGGTCGTCGGCGGCT ACCTCAAGAACGCCGGCATGTTCAGGCACCTGGGCCGGCTGCTGGCGTGGCGGAGCCAGG GCGGGCGCGACCTCATGTGCCGCGTCTGCGTCGTCACCGCGCTCGCCAGCGCGCTCTTCA CCAACGACACCTGCTGCGTCGTCCTCACCGAGTTCGTGCTCGAGCTCGCCGCCGAGCGCA ACCTCCCGGCGAAGCCGTTCCTGCTCGCGCTCGCCACCAGCGCCAACATCGGCTCCAGCG CGACGCCCATCGGCAACCCGCAGAACCTGGTCATCGCCTTCAACAGCAAGATCTCCTTTA TTTCCTTCCTCCTCGGCATCCTCCCCGCCATGCTCGCCGGCATGGGGATCAACATGCTCA TGCTGCTCTGCATGTACTGGAAGGAGCTCGACGGCGGCGCCTGCAGCCCCGACGAGGTCG CCGCCGGCAAGCAGATGGAGGCCATCGAGGAGGGCCGCCGCACGGCGCTCAACAACAACA AGAAAGACGACGGCGACGCCGCCACCCCCGCATCGCCGGAGGACGACGACGGCGGCGACG CCGAGTCGATGATGTCGGAGAACATCTCGACGAAGCACCGGTGGTTCATGCAGTGCTCGG AGCACCGGCGGAAGCTGTTCCTCAAGAGCTTCGCGTACGTGGTCACCGTCGGCATGCTCG TCGCCTACATGCTCGGCCTCAACATGTCGTGGACCGCCATCACGACCGCCATCGCCCTCG TCGTCGTCGACTTCCGCGACGCCGAGCCATGCCTCGACAAGGTGTCGTACTCGCTGCTGG TGTTCTTCTCGGGGATGTTCGTGACGGTGAGCGGGTTCAACAAGACGGGGCTACCCGGGG CCATCTGGAACGTGATGGCGCCCTACTCAAAGATCAACCACGTCACCGGCGTCACCGTCC TCTCCGTCATCATCCTCCTCCTCTCCAACCTCGCCTCCAACGTCCCCACCGTGTTGTTGA TGGGGGATGAGGTGGCGGCGGCGGCGGCGACGATATCACCGGCGGCGGTGACGCGGTCGT GGCTGCTGCTGGCGTGGGTGAGCACGGTGGCGGGGAACCTGTCGCTGCTGGGGTCGGCGG CGAACCTGATCGTGTGCGAGCAGGCGAGGCGGGCGACGCGCAACGCCTACGACCTCACCT TCTGGAACCACGTCATCTTCGGACTCCCATCCACCCTCGTCGTCACCGCCATCGGCATCC CTCTCATCGGCAAGATCAACATCTAGTATTCATTAAATTAATTAATTAATATAATCCGGC TAGCTACTATCTACAACGATCAGAAGAAGGCAGAATGATCGAGCATGCAAGAATTCATGC AAATTACAAGGGATGTGATATGATCATATTAATCCAAGGAAGCTAGTATGATGATTAAGT TTGTGATCAAGCCGTACTATGTGCATGCCAATGCATGCATGTGTTCAAGTGTACACTATG CTTGGTCTCAAGTGGATCAATTATATTGGTGCCATGCTCTGGGATAATTAGTTAATTAGT ACTTATGATAAGCTAGAGAGGAGGATGCATTATATTGGTGCATGGTAATAAGGCAAATGA ACAGCAGAATGCATGTATATATGTACTGTATCCCTGTTGCCAGCTGGTCTCTGTTTGAAT GAAGTTGATAGCAACAAAGCTAGCACTAGCGAATGAGCTAGTGACTCAAGTACGCATGCC GGATTACCTCATTGCTCCAAACTTGCAATCAGTTTTGAACTTTTAATAAAGTTAATTTGG CTTTGTGCACTTGTC