Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0546600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:21368384:21373100:1 gene:Os10g0546600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 97C2 description:Similar to Chloroplast carotenoid epsilon-ring hydroxylase. (Os10t0546600-01)
Sequence	ATGGCCGCCGCCGCCGCCGCCGCCGTCCCGTGCGTACCATTCCTGTGCCCGCCTCCTCCG CCATTGGTCTCGCCGCGTCTCCGCCGTGGCCACGTCCGCCTCCGCCTGCGGCCGCCAAGG AGCAGCGGCGGTGGAGGCGGAGGCGGAGCGGGGGGAGACGAGCCGCCCATCACCACCTCG TGGGTGAGCCCCGACTGGCTCACGGCGCTCTCCCGCTCGGTGGCAACCCGCCTCGGCGGG GGCGACGACTCGGGGATCCCCGTCGCCTCCGCCAAGCTCGACGACGTGCGGGACCTCCTC GGCGGCGCGCTCTTCCTCCCTCTCTTCAAGTGGTTCCGCGAGGAAGGCCCCGTCTACCGC CTCGCGGCGGGGCCGCGGGATCTCGTCGTCGTCAGCGATCCCGCCGTTGCCAGGCACGTG CTGCGTGGGTACGGTTCGAGGTACGAGAAGGGGCTCGTCGCCGAGGTTTCCGAGTTCCTC TTCGGCTCCGGGTTCGCCATCGCCGAGGGCGCTCTCTGGACGGTGAGACGTCGATCAGTT GTACCATCTCTACACAAACGATTTCTCTCGGTGATGGTTGACAGAGTTTTTTGTAAATGT GCTGAGAGATTAGTGGAGAAGCTTGAGACATCTGCTTTAAGTGGCAAACCTGTAAATATG GAAGCAAGGTTCTCTCAAATGACTTTAGATGTGATTGGTTTGTCCTTGTTCAATTACAAT TTTGATTCCCTCACATCAGATAGCCCTGTTATTGATGCTGTTTACACTGCACTCAAGGAA GCAGAACTTCGTTCTACAGATCTTTTACCATACTGGAAGATTGATTTGCTGTGCAAGATT GTTCCTAGACAAATAAAAGCAGAAAAGGCAGTTAACATCATCAGGAATACCGTTGAGGAC CTAATTACCAAATGCAAGAAGATTGTAGATGCTGAGAATGAACAAATTGAGGGTGAGGAA TATGTAAATGAGGCAGACCCTAGCATCCTGCGATTCCTACTTGCTAGCCGTGAAGAGGTA ACCAGTGTGCAGTTACGTGATGATCTATTGTCAATGTTAGTTGCTGGTCATGAAACAACA GGCTCTGTACTGACGTGGACTATTTATCTTCTCAGTAAGGATCCAGCAGCGCTGAGGAGA GCTCAAGCAGAGGTTGACCGTGTTCTACAAGGTAGACTCCCCAGATATGAAGATCTAAAA GAGCTGAAGTACTTGATGCGCTGTATAAATGAGTCTATGCGGCTTTATCCACACCCACCT GTGTTGATACGGCGAGCCATAGTTGATGATGTGCTTCCCGGAAACTATAAGATCAAAGCT GGTCAAGATATTATGATTTCAGTGTACAATATACACAGGTCACCTGAGGTTTGGGACAGA GCTGATGATTTTATTCCTGAGAGATTTGATTTAGAGGGACCTGTTCCAAATGAGACAAAC ACTGAATACAGATTTATCCCATTCAGTGGAGGTCCTCGGAAATGTGTTGGAGATCAGTTT GCTCTCTTGGAAGCAATTGTGGCACTTGCTGTTGTGTTGCAGAAGATGGACATTGAGCTT GTGCCAGATCAAAAAATTAACATGACTACTGGGGCCACAATTCATACAACCAATGGCCTG TATATGAATGTAAGTCTGCGTAAAGTTGACAGGGAACCTGATTTTGCACTCAGTGGGTCC AGATGA

Peptide Sequence

PEP ID	Os10t0546600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:21368384:21373100:1 gene:Os10g0546600 transcript:Os10t0546600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 97C2 description:Similar to Chloroplast carotenoid epsilon-ring hydroxylase. (Os10t0546600-01)
Sequence	MAAAAAAAVPCVPFLCPPPPPLVSPRLRRGHVRLRLRPPRSSGGGGGGGAGGDEPPITTS WVSPDWLTALSRSVATRLGGGDDSGIPVASAKLDDVRDLLGGALFLPLFKWFREEGPVYR LAAGPRDLVVVSDPAVARHVLRGYGSRYEKGLVAEVSEFLFGSGFAIAEGALWTVRRRSV VPSLHKRFLSVMVDRVFCKCAERLVEKLETSALSGKPVNMEARFSQMTLDVIGLSLFNYN FDSLTSDSPVIDAVYTALKEAELRSTDLLPYWKIDLLCKIVPRQIKAEKAVNIIRNTVED LITKCKKIVDAENEQIEGEEYVNEADPSILRFLLASREEVTSVQLRDDLLSMLVAGHETT GSVLTWTIYLLSKDPAALRRAQAEVDRVLQGRLPRYEDLKELKYLMRCINESMRLYPHPP VLIRRAIVDDVLPGNYKIKAGQDIMISVYNIHRSPEVWDRADDFIPERFDLEGPVPNETN TEYRFIPFSGGPRKCVGDQFALLEAIVALAVVLQKMDIELVPDQKINMTTGATIHTTNGL YMNVSLRKVDREPDFALSGSR

Transcript Sequence

Transcript ID	Os10t0546600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21368384:21373100:1 gene:Os10g0546600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:P-450 97C2 description:Similar to Chloroplast carotenoid epsilon-ring hydroxylase. (Os10t0546600-01)
Sequence	ACTGCCAACTGCTCATCTCGTCTCGTCTCTCTCTCCCCCCAATCCGGCGACCCCAATTCC CCAAAATCCATCTCGAATCCCTAGCTCGCGGGCGGCCAGTGCGATGGCCGCCGCCGCCGC CGCCGCCGTCCCGTGCGTACCATTCCTGTGCCCGCCTCCTCCGCCATTGGTCTCGCCGCG TCTCCGCCGTGGCCACGTCCGCCTCCGCCTGCGGCCGCCAAGGAGCAGCGGCGGTGGAGG CGGAGGCGGAGCGGGGGGAGACGAGCCGCCCATCACCACCTCGTGGGTGAGCCCCGACTG GCTCACGGCGCTCTCCCGCTCGGTGGCAACCCGCCTCGGCGGGGGCGACGACTCGGGGAT CCCCGTCGCCTCCGCCAAGCTCGACGACGTGCGGGACCTCCTCGGCGGCGCGCTCTTCCT CCCTCTCTTCAAGTGGTTCCGCGAGGAAGGCCCCGTCTACCGCCTCGCGGCGGGGCCGCG GGATCTCGTCGTCGTCAGCGATCCCGCCGTTGCCAGGCACGTGCTGCGTGGGTACGGTTC GAGGTACGAGAAGGGGCTCGTCGCCGAGGTTTCCGAGTTCCTCTTCGGCTCCGGGTTCGC CATCGCCGAGGGCGCTCTCTGGACGGTGAGACGTCGATCAGTTGTACCATCTCTACACAA ACGATTTCTCTCGGTGATGGTTGACAGAGTTTTTTGTAAATGTGCTGAGAGATTAGTGGA GAAGCTTGAGACATCTGCTTTAAGTGGCAAACCTGTAAATATGGAAGCAAGGTTCTCTCA AATGACTTTAGATGTGATTGGTTTGTCCTTGTTCAATTACAATTTTGATTCCCTCACATC AGATAGCCCTGTTATTGATGCTGTTTACACTGCACTCAAGGAAGCAGAACTTCGTTCTAC AGATCTTTTACCATACTGGAAGATTGATTTGCTGTGCAAGATTGTTCCTAGACAAATAAA AGCAGAAAAGGCAGTTAACATCATCAGGAATACCGTTGAGGACCTAATTACCAAATGCAA GAAGATTGTAGATGCTGAGAATGAACAAATTGAGGGTGAGGAATATGTAAATGAGGCAGA CCCTAGCATCCTGCGATTCCTACTTGCTAGCCGTGAAGAGGTAACCAGTGTGCAGTTACG TGATGATCTATTGTCAATGTTAGTTGCTGGTCATGAAACAACAGGCTCTGTACTGACGTG GACTATTTATCTTCTCAGTAAGGATCCAGCAGCGCTGAGGAGAGCTCAAGCAGAGGTTGA CCGTGTTCTACAAGGTAGACTCCCCAGATATGAAGATCTAAAAGAGCTGAAGTACTTGAT GCGCTGTATAAATGAGTCTATGCGGCTTTATCCACACCCACCTGTGTTGATACGGCGAGC CATAGTTGATGATGTGCTTCCCGGAAACTATAAGATCAAAGCTGGTCAAGATATTATGAT TTCAGTGTACAATATACACAGGTCACCTGAGGTTTGGGACAGAGCTGATGATTTTATTCC TGAGAGATTTGATTTAGAGGGACCTGTTCCAAATGAGACAAACACTGAATACAGATTTAT CCCATTCAGTGGAGGTCCTCGGAAATGTGTTGGAGATCAGTTTGCTCTCTTGGAAGCAAT TGTGGCACTTGCTGTTGTGTTGCAGAAGATGGACATTGAGCTTGTGCCAGATCAAAAAAT TAACATGACTACTGGGGCCACAATTCATACAACCAATGGCCTGTATATGAATGTAAGTCT GCGTAAAGTTGACAGGGAACCTGATTTTGCACTCAGTGGGTCCAGATGAACGGAAGGAAA CAGCTTCAAAGCAGAAAAGCAAAAGATGTACATCGACACACATGAGATGTAATCTACAAG TTTAAATTTATTGCT