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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0546100-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:21338222:21339608:1 gene:Os10g0546100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os10t0546100-01)
Sequence

ATGGCGTGGAGGAGGACGTTGCTCGCGCTGGTGGCCGTCGCGGCGGCGGCGGCGGCGGCG
ACGCGCGCCGATGCGTGGCACAACTACGGCGCGGCCAAGTTCACGGTGACCGGCTCGGTG
CTGTGCCAGGACTGCACCAAGAGCTGGAACGCCTACGCCTACAACGCCAAGCCCATTCCA
GGGAGCATGGTGGGCATCACCTGCCTAGACAAGGAGACGGGAAGGACGGTGTACCACGGG
ACAGACAAGACGGATGACAAGGGTATGTTCAATATTGAGGTGCCATACACTGTCGGCAGC
GCCCACCTCCACCCATCAGCATGCCTCGTCCGCCTCGCCTCCTCCGGGGACCACGGTTGC
GCCGTCTTCACCAACTTCAATGGCGGTAAGACTGGCGAGCGGCCGTGCCGCCCCTCCCAT
GTCTACCCCGGAAGGGTCACCTACTCCGCCGGCCCCTTCTACTTCACCCTGTCCCAGTGT
GACGTTAAGGACGGTGCCACCTACTGA

Peptide Sequence

PEP ID

Os10t0546100-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:21338222:21339608:1 gene:Os10g0546100 transcript:Os10t0546100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os10t0546100-01)
Sequence

MAWRRTLLALVAVAAAAAAATRADAWHNYGAAKFTVTGSVLCQDCTKSWNAYAYNAKPIP
GSMVGITCLDKETGRTVYHGTDKTDDKGMFNIEVPYTVGSAHLHPSACLVRLASSGDHGC
AVFTNFNGGKTGERPCRPSHVYPGRVTYSAGPFYFTLSQCDVKDGATY

Transcript Sequence

Transcript ID

Os10t0546100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21338222:21339608:1 gene:Os10g0546100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pollen Ole e 1 allergen and extensin domain containing protein. (Os10t0546100-01)
Sequence

AGTGATCATCACCTCTCACAAGCAGTCATCTAACCACACTTATCATCATCCCTCCAGTCG
ATCCAGACCGAGGCAGGCGTACGTGAGATGGCGTGGAGGAGGACGTTGCTCGCGCTGGTG
GCCGTCGCGGCGGCGGCGGCGGCGGCGACGCGCGCCGATGCGTGGCACAACTACGGCGCG
GCCAAGTTCACGGTGACCGGCTCGGTGCTGTGCCAGGACTGCACCAAGAGCTGGAACGCC
TACGCCTACAACGCCAAGCCCATTCCAGGGAGCATGGTGGGCATCACCTGCCTAGACAAG
GAGACGGGAAGGACGGTGTACCACGGGACAGACAAGACGGATGACAAGGGTATGTTCAAT
ATTGAGGTGCCATACACTGTCGGCAGCGCCCACCTCCACCCATCAGCATGCCTCGTCCGC
CTCGCCTCCTCCGGGGACCACGGTTGCGCCGTCTTCACCAACTTCAATGGCGGTAAGACT
GGCGAGCGGCCGTGCCGCCCCTCCCATGTCTACCCCGGAAGGGTCACCTACTCCGCCGGC
CCCTTCTACTTCACCCTGTCCCAGTGTGACGTTAAGGACGGTGCCACCTACTGATCGACC
GTCTTTTGATCTTTTCAGTAGCAGGCCTATAAATTAAGTTTTTTCCGTTATATGATATCC
AATGGTTTTGAGAACGCGCAGAAATAATTCCGTTGGTTGTTAGTGTGTTGTTTGGCCTTT
GTAAACGGCGATGGACTGATGGTGTGTCTGTGATATGCAATAGTACTTTTGAGCT