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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0545700-04
CDS Infomation

cds chromosome:IRGSP-1.0:10:21328299:21330351:1 gene:Os10g0545700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARSENATE REDUCTASE 1 description:Similar to Rhodanese-like protein. (Os10t0545700-01);Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25). (Os10t0545700-02);Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25). (Os10t0545700-03);Dual-specificity tyrosine-phosphatase CDC25, Arsenic metabolism (Os10t0545700-04)
Sequence

ATGGCGCGGAGCGTGTCGTACGTGTCGGCGGCGAAGCTCCTGGCCATGGCGCGCAGCAAC
CCCCGCGTCGCCATCATCGACGTCAGGGACGAGGAGAGGAGCTACCAGGCGCACATCGGG
GGGTCGCACCACTTCTCCAGCCGCAGCTTCGCGGCGCGGCTGCCGGAGCTCGCGCGTGCC
ACCGGCGACAAGGACACCGTCGTCTTCCACTGCGCCCTCAGCAAGGTGCGAGGTCCATCG
TGTGCCAAGATGTTCTCCGACTATCTATCTGAGACCAAGGAAGAATCAGGAACAAAGAAC
ATCATGGTGCTGGAACGTGGGTTCAATGGATGGGAGCTTTCGGGACAACCCGTTTGCCGG
TGCACTGATGCCCCTTGCAAAGGCACATGCTCACCTGAAGAACCTGAGTTGTAA

Peptide Sequence

PEP ID

Os10t0545700-04
PEP Infomation

pep chromosome:IRGSP-1.0:10:21328299:21330351:1 gene:Os10g0545700 transcript:Os10t0545700-04 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARSENATE REDUCTASE 1 description:Similar to Rhodanese-like protein. (Os10t0545700-01);Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25). (Os10t0545700-02);Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25). (Os10t0545700-03);Dual-specificity tyrosine-phosphatase CDC25, Arsenic metabolism (Os10t0545700-04)
Sequence

MARSVSYVSAAKLLAMARSNPRVAIIDVRDEERSYQAHIGGSHHFSSRSFAARLPELARA
TGDKDTVVFHCALSKVRGPSCAKMFSDYLSETKEESGTKNIMVLERGFNGWELSGQPVCR
CTDAPCKGTCSPEEPEL

Transcript Sequence

Transcript ID

Os10t0545700-04
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21328299:21330351:1 gene:Os10g0545700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARSENATE REDUCTASE 1 description:Similar to Rhodanese-like protein. (Os10t0545700-01);Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25). (Os10t0545700-02);Similar to Dual specificity phosphatase Cdc25 (EC 3.1.3.48) (Arath;CDC25). (Os10t0545700-03);Dual-specificity tyrosine-phosphatase CDC25, Arsenic metabolism (Os10t0545700-04)
Sequence

GCAGATTCCTCATCAGTACGCCTTTCTCTCGGAGGAGAGGGGAAAGGAAGGCGGAGGCGG
GGAGGATGGCGCGGAGCGTGTCGTACGTGTCGGCGGCGAAGCTCCTGGCCATGGCGCGCA
GCAACCCCCGCGTCGCCATCATCGACGTCAGGGACGAGGAGAGGAGCTACCAGGCGCACA
TCGGGGGGTCGCACCACTTCTCCAGCCGCAGCTTCGCGGCGCGGCTGCCGGAGCTCGCGC
GTGCCACCGGCGACAAGGACACCGTCGTCTTCCACTGCGCCCTCAGCAAGGTGCGAGGTC
CATCGTGTGCCAAGATGTTCTCCGACTATCTATCTGAGACCAAGGAAGAATCAGGAACAA
AGAACATCATGGTGCTGGAACGTGGGTTCAATGGATGGGAGCTTTCGGGACAACCCGTTT
GCCGGTGCACTGATGCCCCTTGCAAAGGCACATGCTCACCTGAAGAACCTGAGTTGTAAC
TCTACTCGCTTCCTGAATGATCAGCAATGTTGGCAGTCGATCTCCAATGCTGAATTTGGT
CTATTTTG