Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0543800-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:21231593:21233093:-1 gene:Os10g0543800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHLOEM PROTEIN 31 description:Similar to Glutathione S-transferase GST 11 (EC 2.5.1.18). (Os10t0543800-00)
Sequence

ATGCCGGGAGCCGTGAAGGTGTTCGGGTCGCCGTCGTCGGCCGAGGTGGCCCGCGTGCTG
GCTTGCCTGTTCGAGAAGGACGTCGAGTTCCAGCTCATCCGCGTCGACTCCTTTCGCGGG
TCCAAACGCATGCCCCAGTATCTCAAACTCCAGCCTCACGGCGAGGCTCTCACCTTCGAG
GACGGCAATGTGACGCTCGTCGAGTCGAGGAAGATCATAAGGCACATTGCGGACAAGTAC
AAGAACCAGGGGAACCCGGACCTGATCGGGATGGGGGCGTTGGAGAGGTCGTCGATCGAG
CAGTGGCTGCAGACGGAGGCGCAGAGCTTCGACGTGCCCAGCGCCGACGTGGTCTACAGC
CTCGCCTACCTGCCGGCGGCGACGACGCAGCCTAACAAGGGCGCCGCCGCCGCCGACGGT
GGCCGCTGCGAGGAGGAGAAGAACGACGACGGCGGCCGTGACCGGCAGTACAGCAGCCAG
AGGCAGGGCGGCGCCGGCGCCGGAGGAGGAAGGGATGGCCAGATGGCGGCGGCGCACCGG
CAGAAGGTGGAGGAGATGAAGCAGCTGTTCGAGAAGAGCAGCAAGGAGCTGAGCAAGGTG
CTGGACATCTACGAGCAGCGGCTGGAGGAGGCGGAGTACCTCGCCGGCGACAAGTTCACC
CTCGCCGACCTTTCGCACCTCCCCAACGCCGACCGCCTCGCCGCCGACCCGCGCACGCTC
CGGATGCTGCAGTCCCGCCGCAACGTCAGCCGGTGGTGGGCCGACGTCTCCGGCCGCGAG
TCGTGGAAGCAGGTCAAGAGCCTCAACCGCCCGCCCTCCGCCGAGGCTCCCTTCTGA

Peptide Sequence

PEP ID

Os10t0543800-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:21231593:21233093:-1 gene:Os10g0543800 transcript:Os10t0543800-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHLOEM PROTEIN 31 description:Similar to Glutathione S-transferase GST 11 (EC 2.5.1.18). (Os10t0543800-00)
Sequence

MPGAVKVFGSPSSAEVARVLACLFEKDVEFQLIRVDSFRGSKRMPQYLKLQPHGEALTFE
DGNVTLVESRKIIRHIADKYKNQGNPDLIGMGALERSSIEQWLQTEAQSFDVPSADVVYS
LAYLPAATTQPNKGAAAADGGRCEEEKNDDGGRDRQYSSQRQGGAGAGGGRDGQMAAAHR
QKVEEMKQLFEKSSKELSKVLDIYEQRLEEAEYLAGDKFTLADLSHLPNADRLAADPRTL
RMLQSRRNVSRWWADVSGRESWKQVKSLNRPPSAEAPF

Transcript Sequence

Transcript ID

Os10t0543800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21231593:21233093:-1 gene:Os10g0543800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHLOEM PROTEIN 31 description:Similar to Glutathione S-transferase GST 11 (EC 2.5.1.18). (Os10t0543800-00)
Sequence

CACACACACTCACAACTGTCAAATCTCACCTGCAGATTAATCAGTTAAGCAACACTTCGA
TTCCTCGCCGCCGTTGCCGCCGCCGCCGACCGGAAAGATGCCGGGAGCCGTGAAGGTGTT
CGGGTCGCCGTCGTCGGCCGAGGTGGCCCGCGTGCTGGCTTGCCTGTTCGAGAAGGACGT
CGAGTTCCAGCTCATCCGCGTCGACTCCTTTCGCGGGTCCAAACGCATGCCCCAGTATCT
CAAACTCCAGCCTCACGGCGAGGCTCTCACCTTCGAGGACGGCAATGTGACGCTCGTCGA
GTCGAGGAAGATCATAAGGCACATTGCGGACAAGTACAAGAACCAGGGGAACCCGGACCT
GATCGGGATGGGGGCGTTGGAGAGGTCGTCGATCGAGCAGTGGCTGCAGACGGAGGCGCA
GAGCTTCGACGTGCCCAGCGCCGACGTGGTCTACAGCCTCGCCTACCTGCCGGCGGCGAC
GACGCAGCCTAACAAGGGCGCCGCCGCCGCCGACGGTGGCCGCTGCGAGGAGGAGAAGAA
CGACGACGGCGGCCGTGACCGGCAGTACAGCAGCCAGAGGCAGGGCGGCGCCGGCGCCGG
AGGAGGAAGGGATGGCCAGATGGCGGCGGCGCACCGGCAGAAGGTGGAGGAGATGAAGCA
GCTGTTCGAGAAGAGCAGCAAGGAGCTGAGCAAGGTGCTGGACATCTACGAGCAGCGGCT
GGAGGAGGCGGAGTACCTCGCCGGCGACAAGTTCACCCTCGCCGACCTTTCGCACCTCCC
CAACGCCGACCGCCTCGCCGCCGACCCGCGCACGCTCCGGATGCTGCAGTCCCGCCGCAA
CGTCAGCCGGTGGTGGGCCGACGTCTCCGGCCGCGAGTCGTGGAAGCAGGTCAAGAGCCT
CAACCGCCCGCCCTCCGCCGAGGCTCCCTTCTGATGATGAGGTCAGCCACCGTGCTCTTC
CGGCCGCCGGCGGCGGCGGCGGCGGCCGGCGAGAGGAGGAGGAGGAGGAGAAGGGGGTCG
CTTTGCTTTATGATTCGTGCTGCGTACACATTTTCCAATGTCGTCGTCGTCGTCGTCAAT
AACCGGACACGTACGTTCGTGTTCGCGCCATATATATCCTGCTGCTGTTGGTGAATTCCG
AGTGGTCACATTATTATATTATATAACTGTCAGTCTTGTAACAAGTTCAATAAAATGCTT
GCCCCTTTGTCGTGATATTTA