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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0542100-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:21168491:21169227:1 gene:Os10g0542100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN II-1A description:Plant EC metallothionein-like protein, family 15 protein. (Os10t0542100-01)
Sequence

ATGGGGTGCGACGACAAGTGCGGGTGCGCCGTCCCGTGCCCCGGCGGCACGGGCTGCAGG
TGCGCGTCTTCGGCGAGGAGCGGCGGCGGCGACCACACGACGTGCTCGTGCGGCGACCAC
TGCGGGTGCAACCCGTGCAGGTGCGGCCGCGAGTCGCAGCCGACGGGGAGGGAGAACCGG
AGGGCCGGCTGCTCCTGCGGCGACTCCTGCACCTGCGCCTCCTGCGGCTCCACCACCACC
ACCGCTCCCGCGGCCACCACCTGA

Peptide Sequence

PEP ID

Os10t0542100-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:21168491:21169227:1 gene:Os10g0542100 transcript:Os10t0542100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN II-1A description:Plant EC metallothionein-like protein, family 15 protein. (Os10t0542100-01)
Sequence

MGCDDKCGCAVPCPGGTGCRCASSARSGGGDHTTCSCGDHCGCNPCRCGRESQPTGRENR
RAGCSCGDSCTCASCGSTTTTAPAATT

Transcript Sequence

Transcript ID

Os10t0542100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:21168491:21169227:1 gene:Os10g0542100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:METALLOTHIONEIN II-1A description:Plant EC metallothionein-like protein, family 15 protein. (Os10t0542100-01)
Sequence

ACTGTACAGGGTAGTAGATCTTTCGTACGTTGGAGCCGGCCGGATCGACGACCATGGGGT
GCGACGACAAGTGCGGGTGCGCCGTCCCGTGCCCCGGCGGCACGGGCTGCAGGTGCGCGT
CTTCGGCGAGGAGCGGCGGCGGCGACCACACGACGTGCTCGTGCGGCGACCACTGCGGGT
GCAACCCGTGCAGGTGCGGCCGCGAGTCGCAGCCGACGGGGAGGGAGAACCGGAGGGCCG
GCTGCTCCTGCGGCGACTCCTGCACCTGCGCCTCCTGCGGCTCCACCACCACCACCGCTC
CCGCGGCCACCACCTGATCCATCCATCCATGCGCCCAAAAATGCCCAACGAGACGTGTTT
ATACGTGTGGTTAAGCGTGTGTACGTGCGCCATGCTTAGTACTCATAGCTGCTTAGCTAA
ACAGCACAGCTGATAAATAAAAAGGGCTTGCTGCTTGAGTCGAGTCGTATCCCGTTGTCT
AGTTCTGGCTAGACTCGCGCATCACGCATGCAACGGACATGGTGATACGCGAGGGATGGA
GAGTTCGGAGTTGGGAGACACTGTGTACTGCAGTACCAGGTTGATAAGTGTGTCTGTACT
TGTGTAAATATGTTTTACATGAATAAAAAGGTTGGTAACTTTGTCATGTTT