Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0539600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:21027467:21032216:1 gene:Os10g0539600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPREADING STUB description:Similar to Calcium-dependent protein kinase 3. (Os10t0539600-01)
Sequence	ATGGGGAATTCTTGCCAAAATGGAACCTATGGGAACAATTACCAGAACAGCAACCGGTTT CAGAATGACCGTTTTGCTTCTCGGTACGTTGATGGGAATGATACTGAGGATTGCTACTCG GGCTCGTCAAGGGCCAGCTTAGCGGGTGCTCTGCGGCAAGGGCTGAACCTAAAGTCCCCT GTCCTTGGATACAAGACTCCAAATGTAAGGGAGCTCTATACTCTTGGCCGGGAGCTTGGA CAGGGACAGTTCGGGAAAACATACCTCTGCACTGAGATTAGCACAGGGTGTCAATATGCA TGCAAGACTATCTTAAAGAGTAATCTCCGATGTGTGTCAGATATCGAGGACGTGCGCCGT GAAATCCAGATAATGCACCATCTTTCGGGCCAGAAGAATATAGTGACAATCAAGGACACA TATGAGGATGAGCAGGCCGTGCACATCGTCATGGAGCTCTGTGCAGGTGGTGAGCTCTTC AGCAAGATTCAGAAGCGAGGTCATTACAGTGAACGGAAGGCTGCAGAGCTTATAAAAATT ATAGTTGGCATCATAGAAACATGCCATTCACATGGAGTGATGCACCGGGATCTCAAGCCA GAAAATTTCCTCTTACTGGACGCAGACGATGAATTCTCGGTTAAAGCAATTGACTTTGGT CTATCTGTGTTCTTCAGACCAGGTCAGGTTTTCAGAGAGGTAGTGGGAAGTCCATATTAT ATTGCTCCAGAGGTATTGGAGAAGCGTTATGGACCAGAGGCTGATATATGGACTGCTGGA GTGATTCTCTATGTATTGCTGACTGGTGTTCCTCCATTTTGGGCAGATACACAAAGCGGG ATATATGAAAAAGTACTGGATGGACGTATTGATTTTAAATCAAACCGGTGGCCCAGGATA TCTGACAGTGCAAAGGATCTTATAAAAAAGATGCTCTGCCCTTATCCATCAGAGCGTTTG AAAGCCCATGAAGTGCTAAAGCATCCATGGATATGTGATAATGGAGTGGCTACTAATCGA GCTCTGGATCCAAGTGTACTTCCTCGTCTCAAGCAATTTTCTGCAATGAATAGGTTAAAG AAATTGTCTCTCCAGATTATTGCTGAGCGTCTTTCAGAAGAGGAGATTGTTGGGTTAAGA GAAATGTTCAAGGCTATGGACACCAAAAACAGAAGTGTGGTTACATTTGGTGAGCTTAAG GGACTGAAAAGATACAGCTCAGTGTTCAAGGATACTGAAATTAACGACTTAATGGAAGCA GCTGATGACACCACCTCCACCATCAACTGGGAAGAGTTTATTGCTGCAGCAGTGTCTCTT AATAAAATAGAACGTGAGAAACACTTGATGGCAGCCTTTACATACTTTGACAAAGATGGA AGTGGTTTTATCACAGTTGACAAGCTTCAAAAGGCTTGCATGGAACGTAACATGGAAGAT ACTTTCCTTGAAGAGATGATTCTGGAGGTTGATCAAAACAATGATGGTCAAATCGATTAT GCTGAATTTGTCACAATGATGCAAAGCAACAACTTTGGACTTGGGTGGCAAACGGTGGAA AGCAGCCTGAATGTAGCCCTGAGGGAGGCACCCCAAGTATACTGA

Peptide Sequence

PEP ID	Os10t0539600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:21027467:21032216:1 gene:Os10g0539600 transcript:Os10t0539600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPREADING STUB description:Similar to Calcium-dependent protein kinase 3. (Os10t0539600-01)
Sequence	MGNSCQNGTYGNNYQNSNRFQNDRFASRYVDGNDTEDCYSGSSRASLAGALRQGLNLKSP VLGYKTPNVRELYTLGRELGQGQFGKTYLCTEISTGCQYACKTILKSNLRCVSDIEDVRR EIQIMHHLSGQKNIVTIKDTYEDEQAVHIVMELCAGGELFSKIQKRGHYSERKAAELIKI IVGIIETCHSHGVMHRDLKPENFLLLDADDEFSVKAIDFGLSVFFRPGQVFREVVGSPYY IAPEVLEKRYGPEADIWTAGVILYVLLTGVPPFWADTQSGIYEKVLDGRIDFKSNRWPRI SDSAKDLIKKMLCPYPSERLKAHEVLKHPWICDNGVATNRALDPSVLPRLKQFSAMNRLK KLSLQIIAERLSEEEIVGLREMFKAMDTKNRSVVTFGELKGLKRYSSVFKDTEINDLMEA ADDTTSTINWEEFIAAAVSLNKIEREKHLMAAFTYFDKDGSGFITVDKLQKACMERNMED TFLEEMILEVDQNNDGQIDYAEFVTMMQSNNFGLGWQTVESSLNVALREAPQVY

Transcript Sequence

Transcript ID	Os10t0539600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:21027467:21032216:1 gene:Os10g0539600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPREADING STUB description:Similar to Calcium-dependent protein kinase 3. (Os10t0539600-01)
Sequence	TCTCCTCTCCATTTTTTTCCTCCTATCGATTTTGCAATTTAGCCCCTAGGGAGGCAGGGA ATCCGGCTCCGGTCCCTGTGCCGCTCCCCCCGGCTCTCCTTGCCTCCCTTGCTCCTCCGA TCGAGGCTGAAGCGGCTTCAGGATATACATTTTTGTGGGAATGGGGAATTCTTGCCAAAA TGGAACCTATGGGAACAATTACCAGAACAGCAACCGGTTTCAGAATGACCGTTTTGCTTC TCGGTACGTTGATGGGAATGATACTGAGGATTGCTACTCGGGCTCGTCAAGGGCCAGCTT AGCGGGTGCTCTGCGGCAAGGGCTGAACCTAAAGTCCCCTGTCCTTGGATACAAGACTCC AAATGTAAGGGAGCTCTATACTCTTGGCCGGGAGCTTGGACAGGGACAGTTCGGGAAAAC ATACCTCTGCACTGAGATTAGCACAGGGTGTCAATATGCATGCAAGACTATCTTAAAGAG TAATCTCCGATGTGTGTCAGATATCGAGGACGTGCGCCGTGAAATCCAGATAATGCACCA TCTTTCGGGCCAGAAGAATATAGTGACAATCAAGGACACATATGAGGATGAGCAGGCCGT GCACATCGTCATGGAGCTCTGTGCAGGTGGTGAGCTCTTCAGCAAGATTCAGAAGCGAGG TCATTACAGTGAACGGAAGGCTGCAGAGCTTATAAAAATTATAGTTGGCATCATAGAAAC ATGCCATTCACATGGAGTGATGCACCGGGATCTCAAGCCAGAAAATTTCCTCTTACTGGA CGCAGACGATGAATTCTCGGTTAAAGCAATTGACTTTGGTCTATCTGTGTTCTTCAGACC AGGTCAGGTTTTCAGAGAGGTAGTGGGAAGTCCATATTATATTGCTCCAGAGGTATTGGA GAAGCGTTATGGACCAGAGGCTGATATATGGACTGCTGGAGTGATTCTCTATGTATTGCT GACTGGTGTTCCTCCATTTTGGGCAGATACACAAAGCGGGATATATGAAAAAGTACTGGA TGGACGTATTGATTTTAAATCAAACCGGTGGCCCAGGATATCTGACAGTGCAAAGGATCT TATAAAAAAGATGCTCTGCCCTTATCCATCAGAGCGTTTGAAAGCCCATGAAGTGCTAAA GCATCCATGGATATGTGATAATGGAGTGGCTACTAATCGAGCTCTGGATCCAAGTGTACT TCCTCGTCTCAAGCAATTTTCTGCAATGAATAGGTTAAAGAAATTGTCTCTCCAGATTAT TGCTGAGCGTCTTTCAGAAGAGGAGATTGTTGGGTTAAGAGAAATGTTCAAGGCTATGGA CACCAAAAACAGAAGTGTGGTTACATTTGGTGAGCTTAAGGGACTGAAAAGATACAGCTC AGTGTTCAAGGATACTGAAATTAACGACTTAATGGAAGCAGCTGATGACACCACCTCCAC CATCAACTGGGAAGAGTTTATTGCTGCAGCAGTGTCTCTTAATAAAATAGAACGTGAGAA ACACTTGATGGCAGCCTTTACATACTTTGACAAAGATGGAAGTGGTTTTATCACAGTTGA CAAGCTTCAAAAGGCTTGCATGGAACGTAACATGGAAGATACTTTCCTTGAAGAGATGAT TCTGGAGGTTGATCAAAACAATGATGGTCAAATCGATTATGCTGAATTTGTCACAATGAT GCAAAGCAACAACTTTGGACTTGGGTGGCAAACGGTGGAAAGCAGCCTGAATGTAGCCCT GAGGGAGGCACCCCAAGTATACTGAACTCCTGTCGCCTGGCACCCCCAAGAATTCAGTTT GTTCTCCTGAGCCTTTCATCTGTTTATCACAACACATAGTTGTGGATTTGAGAGAAGAGA GCCAAGACTAGATGGTTTATCAGTAATCACCCTATAGCAGTGGTGGAAGAAGACTCTCTT AGTACCTAATAGCATATAAATGTGTGGTCTAAAGACATCGTATATGTATGAACCTCATAA GTTCGTTCGTTCGTTCGTTTGGTTGGTTGGTTTGCTACCCTGCTATCTAATAATAATATC AATAATACCCGAAGAACCCCTCTTGGTTCTGC