Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0537300-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:20929638:20934582:-1 gene:Os10g0537300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0537300-01)
Sequence	ATGCTGCCCTACCACGGCGATCGCCACCGGGGCTCGCCCCCGCCGTACCCCGCGGCAGCG GCGCACTCCTCGCTCTCCCCCTCGGCCGCTCCCTTCACCGTGGACTGCCCCCGCCCCGCG GCGGATCCCAGGGTCCGCAACCCCAACCCCCCCGGGCTCGATCTCCCCACCGCGCCTTCC CTCTACACCACCGCCGCCGCCGGAGACTGGGGGAGCTCGTCGTGGATGGAACCCCCCGCC AGCTACATGGCCCCCTCCCCCGCCGCTGCCACCCCCCCGCCGCCGGCGTATAAAGGTGAA GCTCCTGAAACTGCACCATATGGTATATTCCCTGGGACTTGTCAAATTGGTAACTTTATG GTTACACGTCCATTGAGATCAGAGAGCTCACAACTAACAAGTGCAAAAGGTCCTGGAACT TGGCTAGGAAGTTCAGAGGTTCTGCCCAGTGGTGTTGGGCCATCAGTTTTTAGTCCGCAG CAGAATACCTTTGTGCATAAATCAGAAGATGCAGAACCTTATCCTACACAGCGAGGTTTA TTACAGTATCCTCCTCAGTATCCTGCATATGACAAATACATGACACAGCTTTCATCATGT TCAACAAATGTGCCACCTCCTGTCATGTGGACGCCACCTGCCAATTCTTCTGAAGTGGTC GAACAAATGTTTCCAGTGATGAATAAAAATACTGGGGAAAGTTCTTCATCCTTTTCTTCA TATATGAATCCTTGTAGAATCAACCTTGATTATTTTGATTGCATGTGGAATGAACAAAAA GATCTTGGGCATCAGACTACTGATAAACACCATGGAAAATGGAGCAGCTCTGCTAGCAAT GCGGGAGACCATTTGCTCAATTCTCTTGGAGCAGATCACCGTGCTGCAAGGTGTTTTGGA AATGGGAGACCTATACAGGAATCTTCAGAGATGAAATATGACCGGGGTAGCTTTAATTCC AAAGTTTCTCCATCTGAGGTTGGATATGTTCAGTCTCGTGAATTTTCATCCGAGTTGCCT GAGGTTAATAACCCCACTGTTGATTCACCTTGTTGGAAGGGTGCACCTATTGCATATCCT CCTTCATTTGGTATTATGAAAAATACCGACAATTCCCACTCTGTAAATGGGGTAGGTGGT TATCAAATCGAGCAATCACCCGAATGGAGTTTAAAGTATTCAGAGCTATTCTCCAAACAT CAGGAAGTATCAGCTTCTGAAAGTGTCAAAAGTGATGCTTTGAAGACATTCAAGTTGCCC GAGACACGTAAAAACACTGAAGATAATAAAGAAGTACTTCCGGTCTGTATTGGGGTTCAT AATGGTATTGGTAACAATGCAAGTTATTTTCCTGAAGAACAAAATTCCAGAAGACAGAAA TGCTATGATTCTACAGGAGATTGTAAGAACATGATAGCTGCGAATCAACAGGAAAACCTT TCAGTCAGCAAAGCCAAACTCTTAGGTGAGGATAGTTCCAACCATATTGGGAGCATAACT GAAGAATCAATTAACAAAGGGCCTAGTCCTCTTGGCAGTGCTCCTAGGGCTCTTGTTGAG AATCTGAGTGAAAGCCTACATGTTAATGTTTGTTCTCAAGCAGCTGGGGCAGAGGAATGC ACACAGGCTCAAATATGTGCAAAAGGAGGTCAGCAGCCTCGCTATTATTCAGATTCTGGG GGGAGCATGTTGAAGACGTCTTCTGAATCAAGATCGAAGTCTCGGGCAGAACTTCTGAAA CAAATGCATGATTTATCGGCAATGCTTCTGTCCACTTGCAATAGCGTTCCATTACAGGGA TATGAAGAGGAACTTCTGCAATTAGTGATTCAAAATCTTAGAGATGCTAGTTCCTGTATA AGCAAGGTTCAAAATATGAGTTGTTCAAGGAATAACTTATGGATGGCAATGCCTGAACAC TCATTAGTAGAGAACGATTCAGAATTGAAGACCTCTATTTCACAGGCTGTTGCTAAGCTC CCAGAGGATAAGACGCTTGATGATATTGATGTCTCGCAATTGTCGATCTACAAAAATTTG TGGGTTGAAGCAGAAGCATCAGCATGTAAGCTCAAATATGAGCTTCAACTTACCCGTGTG AAGCTTGCAGCAATGGAAAATCACAATAACACACAAGTTCCTGTTGACTTATCAAAAGGC AATAAAATCTTTATCTCAACCATACCCAATAGTAAACCACAAAACAGCACTGCCTATCCT GCGAACTTGCAATGTCAGGGAGCAGATAGTTGTGACGGGCAACTTCCTGCAGTAAATAGG AGCATCATTGATGGTGTTGATGCTGAGGTGATTGAGCGATTGAAATTTTTACAGTCCAAT TTGAAGGATTGTCGTGCTTTTTGCCAAAACAACTGTGAAGAGCAGGAAGAAGCAAGCAAA AAACCATGTGCAATTGAAGATGCTGTTATGGCCAGGCTAAGGGTTTTGAATTCGTGTCCT GATAATATAGCCTCTCTAAAACAGGAAAACAACAACCACCACCAGCTAGATACAAGCACA AACAGAGCAGATAATATTGATGATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGT CCTGATAATGTAAACCCACTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAGCTACA GGCACAAATAATTTTATTGACAATGCTGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGT CCTGATAATGCAAACTCATTGGGTCAGGAAAGCAGCAAGCATGAGCCAGATGCAAGCACA GGCACAAATGATTTAATTGATAATGCTGTTATGTCTAGACTGAGAATTTTGAAGTGCCGT GACGATAATATAAATTCATTGGACGATGCCATCAAGCAGCATGTAGAAGCATGTACTGAT CAACCAAATTGGGATGAAGATGGTGTTGTGGCCAAAATACAAGCTCCAAATGGCGACACT GTGAGCACTGCTGACGGGTTCCAAAATATTCTGCATTCTAATAATTTTGTGAGGCACTCG GAAGGAAAAGATTCTGTCAGTGGTCTAGACTCTCCTGGTGATGCAACCTGTAGTGATGAA GATAATGGTCGCAAGGCACCTTCTGATGAAGTCAATGACAAAACTGCAGTCCAAAGCGAA GGTAGTTTTCCCATGAACATTGGTTGGCCGCTAAGTACAATGGACTCTCATATTTGTACA GCAGGGTCTCAAGAGACGCCCCTAATCTCCTCTTCAGTTCACAGGTATGATATATTTCCG CCGAAGTGGGAGCATATGCTGAAGGAGAACTTCTTCCATCCAGGCAAATAG

Peptide Sequence

PEP ID	Os10t0537300-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:20929638:20934582:-1 gene:Os10g0537300 transcript:Os10t0537300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0537300-01)
Sequence	MLPYHGDRHRGSPPPYPAAAAHSSLSPSAAPFTVDCPRPAADPRVRNPNPPGLDLPTAPS LYTTAAAGDWGSSSWMEPPASYMAPSPAAATPPPPAYKGEAPETAPYGIFPGTCQIGNFM VTRPLRSESSQLTSAKGPGTWLGSSEVLPSGVGPSVFSPQQNTFVHKSEDAEPYPTQRGL LQYPPQYPAYDKYMTQLSSCSTNVPPPVMWTPPANSSEVVEQMFPVMNKNTGESSSSFSS YMNPCRINLDYFDCMWNEQKDLGHQTTDKHHGKWSSSASNAGDHLLNSLGADHRAARCFG NGRPIQESSEMKYDRGSFNSKVSPSEVGYVQSREFSSELPEVNNPTVDSPCWKGAPIAYP PSFGIMKNTDNSHSVNGVGGYQIEQSPEWSLKYSELFSKHQEVSASESVKSDALKTFKLP ETRKNTEDNKEVLPVCIGVHNGIGNNASYFPEEQNSRRQKCYDSTGDCKNMIAANQQENL SVSKAKLLGEDSSNHIGSITEESINKGPSPLGSAPRALVENLSESLHVNVCSQAAGAEEC TQAQICAKGGQQPRYYSDSGGSMLKTSSESRSKSRAELLKQMHDLSAMLLSTCNSVPLQG YEEELLQLVIQNLRDASSCISKVQNMSCSRNNLWMAMPEHSLVENDSELKTSISQAVAKL PEDKTLDDIDVSQLSIYKNLWVEAEASACKLKYELQLTRVKLAAMENHNNTQVPVDLSKG NKIFISTIPNSKPQNSTAYPANLQCQGADSCDGQLPAVNRSIIDGVDAEVIERLKFLQSN LKDCRAFCQNNCEEQEEASKKPCAIEDAVMARLRVLNSCPDNIASLKQENNNHHQLDTST NRADNIDDAVMSRLRILKSRPDNVNPLGQESSKHEPDAATGTNNFIDNAVMSRLRILKSR PDNANSLGQESSKHEPDASTGTNDLIDNAVMSRLRILKCRDDNINSLDDAIKQHVEACTD QPNWDEDGVVAKIQAPNGDTVSTADGFQNILHSNNFVRHSEGKDSVSGLDSPGDATCSDE DNGRKAPSDEVNDKTAVQSEGSFPMNIGWPLSTMDSHICTAGSQETPLISSSVHRYDIFP PKWEHMLKENFFHPGK

Transcript Sequence

Transcript ID	Os10t0537300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20929638:20934582:-1 gene:Os10g0537300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0537300-01)
Sequence	ACACTCCACCCAACCACCGGTCGCCGCCGGCGAGATGCTGCCCTACCACGGCGATCGCCA CCGGGGCTCGCCCCCGCCGTACCCCGCGGCAGCGGCGCACTCCTCGCTCTCCCCCTCGGC CGCTCCCTTCACCGTGGACTGCCCCCGCCCCGCGGCGGATCCCAGGGTCCGCAACCCCAA CCCCCCCGGGCTCGATCTCCCCACCGCGCCTTCCCTCTACACCACCGCCGCCGCCGGAGA CTGGGGGAGCTCGTCGTGGATGGAACCCCCCGCCAGCTACATGGCCCCCTCCCCCGCCGC TGCCACCCCCCCGCCGCCGGCGTATAAAGGTGAAGCTCCTGAAACTGCACCATATGGTAT ATTCCCTGGGACTTGTCAAATTGGTAACTTTATGGTTACACGTCCATTGAGATCAGAGAG CTCACAACTAACAAGTGCAAAAGGTCCTGGAACTTGGCTAGGAAGTTCAGAGGTTCTGCC CAGTGGTGTTGGGCCATCAGTTTTTAGTCCGCAGCAGAATACCTTTGTGCATAAATCAGA AGATGCAGAACCTTATCCTACACAGCGAGGTTTATTACAGTATCCTCCTCAGTATCCTGC ATATGACAAATACATGACACAGCTTTCATCATGTTCAACAAATGTGCCACCTCCTGTCAT GTGGACGCCACCTGCCAATTCTTCTGAAGTGGTCGAACAAATGTTTCCAGTGATGAATAA AAATACTGGGGAAAGTTCTTCATCCTTTTCTTCATATATGAATCCTTGTAGAATCAACCT TGATTATTTTGATTGCATGTGGAATGAACAAAAAGATCTTGGGCATCAGACTACTGATAA ACACCATGGAAAATGGAGCAGCTCTGCTAGCAATGCGGGAGACCATTTGCTCAATTCTCT TGGAGCAGATCACCGTGCTGCAAGGTGTTTTGGAAATGGGAGACCTATACAGGAATCTTC AGAGATGAAATATGACCGGGGTAGCTTTAATTCCAAAGTTTCTCCATCTGAGGTTGGATA TGTTCAGTCTCGTGAATTTTCATCCGAGTTGCCTGAGGTTAATAACCCCACTGTTGATTC ACCTTGTTGGAAGGGTGCACCTATTGCATATCCTCCTTCATTTGGTATTATGAAAAATAC CGACAATTCCCACTCTGTAAATGGGGTAGGTGGTTATCAAATCGAGCAATCACCCGAATG GAGTTTAAAGTATTCAGAGCTATTCTCCAAACATCAGGAAGTATCAGCTTCTGAAAGTGT CAAAAGTGATGCTTTGAAGACATTCAAGTTGCCCGAGACACGTAAAAACACTGAAGATAA TAAAGAAGTACTTCCGGTCTGTATTGGGGTTCATAATGGTATTGGTAACAATGCAAGTTA TTTTCCTGAAGAACAAAATTCCAGAAGACAGAAATGCTATGATTCTACAGGAGATTGTAA GAACATGATAGCTGCGAATCAACAGGAAAACCTTTCAGTCAGCAAAGCCAAACTCTTAGG TGAGGATAGTTCCAACCATATTGGGAGCATAACTGAAGAATCAATTAACAAAGGGCCTAG TCCTCTTGGCAGTGCTCCTAGGGCTCTTGTTGAGAATCTGAGTGAAAGCCTACATGTTAA TGTTTGTTCTCAAGCAGCTGGGGCAGAGGAATGCACACAGGCTCAAATATGTGCAAAAGG AGGTCAGCAGCCTCGCTATTATTCAGATTCTGGGGGGAGCATGTTGAAGACGTCTTCTGA ATCAAGATCGAAGTCTCGGGCAGAACTTCTGAAACAAATGCATGATTTATCGGCAATGCT TCTGTCCACTTGCAATAGCGTTCCATTACAGGGATATGAAGAGGAACTTCTGCAATTAGT GATTCAAAATCTTAGAGATGCTAGTTCCTGTATAAGCAAGGTTCAAAATATGAGTTGTTC AAGGAATAACTTATGGATGGCAATGCCTGAACACTCATTAGTAGAGAACGATTCAGAATT GAAGACCTCTATTTCACAGGCTGTTGCTAAGCTCCCAGAGGATAAGACGCTTGATGATAT TGATGTCTCGCAATTGTCGATCTACAAAAATTTGTGGGTTGAAGCAGAAGCATCAGCATG TAAGCTCAAATATGAGCTTCAACTTACCCGTGTGAAGCTTGCAGCAATGGAAAATCACAA TAACACACAAGTTCCTGTTGACTTATCAAAAGGCAATAAAATCTTTATCTCAACCATACC CAATAGTAAACCACAAAACAGCACTGCCTATCCTGCGAACTTGCAATGTCAGGGAGCAGA TAGTTGTGACGGGCAACTTCCTGCAGTAAATAGGAGCATCATTGATGGTGTTGATGCTGA GGTGATTGAGCGATTGAAATTTTTACAGTCCAATTTGAAGGATTGTCGTGCTTTTTGCCA AAACAACTGTGAAGAGCAGGAAGAAGCAAGCAAAAAACCATGTGCAATTGAAGATGCTGT TATGGCCAGGCTAAGGGTTTTGAATTCGTGTCCTGATAATATAGCCTCTCTAAAACAGGA AAACAACAACCACCACCAGCTAGATACAAGCACAAACAGAGCAGATAATATTGATGATGC TGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGTAAACCCACTGGGTCA GGAAAGCAGCAAGCATGAGCCAGATGCAGCTACAGGCACAAATAATTTTATTGACAATGC TGTTATGTCTAGGCTGAGAATTTTGAAGTCCCGTCCTGATAATGCAAACTCATTGGGTCA GGAAAGCAGCAAGCATGAGCCAGATGCAAGCACAGGCACAAATGATTTAATTGATAATGC TGTTATGTCTAGACTGAGAATTTTGAAGTGCCGTGACGATAATATAAATTCATTGGACGA TGCCATCAAGCAGCATGTAGAAGCATGTACTGATCAACCAAATTGGGATGAAGATGGTGT TGTGGCCAAAATACAAGCTCCAAATGGCGACACTGTGAGCACTGCTGACGGGTTCCAAAA TATTCTGCATTCTAATAATTTTGTGAGGCACTCGGAAGGAAAAGATTCTGTCAGTGGTCT AGACTCTCCTGGTGATGCAACCTGTAGTGATGAAGATAATGGTCGCAAGGCACCTTCTGA TGAAGTCAATGACAAAACTGCAGTCCAAAGCGAAGGTAGTTTTCCCATGAACATTGGTTG GCCGCTAAGTACAATGGACTCTCATATTTGTACAGCAGGGTCTCAAGAGACGCCCCTAAT CTCCTCTTCAGTTCACAGGTATGATATATTTCCGCCGAAGTGGGAGCATATGCTGAAGGA GAACTTCTTCCATCCAGGCAAATAGGCTACCGAACTGAAAGCTATCAAGGAGATCAAGCA ACTATGTTTGCTCATGTTCTAACATGCTTATTGTACATATGCTATCGTAATAACGAAACC TGAAAGATCCATCGGTCCTTTTCCTCTATCTGTGACCAGTATATCATGATACACAACTGG TCAGCATATAAACATCTCATACCGTACGATGTATCTATAATAATTGTGCATATTTTGGAG TT