Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0537100-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:20916158:20917158:-1 gene:Os10g0537100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0537100-00)
Sequence	ATGGAGTTCACCCCAATTTCGCCGCCGACGAGGGTCGCCGGCGGTGAGGAGGATTCCGAG AGGGGGGCGGCGGCGTGGGCGGTGGTGGAGAAGGAGCACATGTTTGAGAAGGTCGTGACG CCGAGCGACGTGGGGAAGCTGAACCGATTGGTCATCCCCAAGCAGCACGCCGAGAGGTAC TTCCCGCTCGACGCCGCGGCGGGCGCCGGCGGCGGCGGTGGTGGCGGCGGTGGCGGCGGC GGGGGGAAGGGGCTGGTGCTGAGCTTCGAGGACAGGACGGGGAAGGCGTGGAGGTTCCGG TACTCGTACTGGAACAGCAGCCAGAGCTACGTGATGACCAAAGGGTGGAGCCGCTTCGTC AAGGAGAAGCGCCTCGGCGCCGGCGACACCGTGTCGTTCGGCCGCGGCCTCGGCGACGCC GCCCGCGGCCGCCTCTTCATCGACTTCCGCCGCCGCCGCCAGGACGCCGGCAGCTTCATG TTCCCGCCGACGGCGGCGCCGCCGTCGCACTCGCACCACCATCATCAGCGACACCACCCG CCGCTCCCGTCCGTGCCCCTTTGCCCGTGGCGAGACTACACCACCGCCTATGGCGGCGGC TACGGCTACGGCTACGGCGGCGGCTCCACCCCGGCGTCCAGCCGCCACGTGCTGTTCCTC CGGCCGCAGGTGCCGGCCGCTGTGGTGCTCAAGTCGGTGCCGGTGCACGTCGCGGCCACC TCGGCGGTGCAGGAGGCGGCGACGACGACAAGGCCGAAGCGTGTCCGGCTGTTCGGGGTG AACCTCGACTGCCCGGCGGCCATGGACGACGACGACGACATCGCCGGAGCGGCGAGCCGG ACGGCAGCGTCGTCTCTCCTGCAGCTCCCCTCGCCGTCGTCCTCGACGTCGTCGTCGACG GCGGGGAAGAAGATGTGCTCCTTGGATCTTGGGTTGTGA

Peptide Sequence

PEP ID	Os10t0537100-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:20916158:20917158:-1 gene:Os10g0537100 transcript:Os10t0537100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0537100-00)
Sequence	MEFTPISPPTRVAGGEEDSERGAAAWAVVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERY FPLDAAAGAGGGGGGGGGGGGGKGLVLSFEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFV KEKRLGAGDTVSFGRGLGDAARGRLFIDFRRRRQDAGSFMFPPTAAPPSHSHHHHQRHHP PLPSVPLCPWRDYTTAYGGGYGYGYGGGSTPASSRHVLFLRPQVPAAVVLKSVPVHVAAT SAVQEAATTTRPKRVRLFGVNLDCPAAMDDDDDIAGAASRTAASSLLQLPSPSSSTSSST AGKKMCSLDLGL

Transcript Sequence

Transcript ID	Os10t0537100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20916158:20917158:-1 gene:Os10g0537100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os10t0537100-00)
Sequence	CTAGTCAAAGTCAACAGCTTTGGTAGGAGGAGGAGCACGCGAGCTTAGGTAGCCTAGCTA TGGAGTTCACCCCAATTTCGCCGCCGACGAGGGTCGCCGGCGGTGAGGAGGATTCCGAGA GGGGGGCGGCGGCGTGGGCGGTGGTGGAGAAGGAGCACATGTTTGAGAAGGTCGTGACGC CGAGCGACGTGGGGAAGCTGAACCGATTGGTCATCCCCAAGCAGCACGCCGAGAGGTACT TCCCGCTCGACGCCGCGGCGGGCGCCGGCGGCGGCGGTGGTGGCGGCGGTGGCGGCGGCG GGGGGAAGGGGCTGGTGCTGAGCTTCGAGGACAGGACGGGGAAGGCGTGGAGGTTCCGGT ACTCGTACTGGAACAGCAGCCAGAGCTACGTGATGACCAAAGGGTGGAGCCGCTTCGTCA AGGAGAAGCGCCTCGGCGCCGGCGACACCGTGTCGTTCGGCCGCGGCCTCGGCGACGCCG CCCGCGGCCGCCTCTTCATCGACTTCCGCCGCCGCCGCCAGGACGCCGGCAGCTTCATGT TCCCGCCGACGGCGGCGCCGCCGTCGCACTCGCACCACCATCATCAGCGACACCACCCGC CGCTCCCGTCCGTGCCCCTTTGCCCGTGGCGAGACTACACCACCGCCTATGGCGGCGGCT ACGGCTACGGCTACGGCGGCGGCTCCACCCCGGCGTCCAGCCGCCACGTGCTGTTCCTCC GGCCGCAGGTGCCGGCCGCTGTGGTGCTCAAGTCGGTGCCGGTGCACGTCGCGGCCACCT CGGCGGTGCAGGAGGCGGCGACGACGACAAGGCCGAAGCGTGTCCGGCTGTTCGGGGTGA ACCTCGACTGCCCGGCGGCCATGGACGACGACGACGACATCGCCGGAGCGGCGAGCCGGA CGGCAGCGTCGTCTCTCCTGCAGCTCCCCTCGCCGTCGTCCTCGACGTCGTCGTCGACGG CGGGGAAGAAGATGTGCTCCTTGGATCTTGGGTTGTGAGCT