Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0534900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:20801749:20806453:-1 gene:Os10g0534900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prep (Fragment). (Os10t0534900-01)
Sequence	ATGGCGCACGATCCGAGCCTAGGGTACGCGGATTACTTCGCGGCGGAGGTGGATGGCACC GGCGCCACGGAGTTGTATGGGTTGCAGCAGCATCAGCAGGGGGTTGGGGTGGCGGAGATG TTCGGGGTGAGGGGGCTCATGCCGGCAGCGCACGCGCACGAGCAGAGCAAGGGTGTGGGC GCGCTCGTCGTCGGCGGCGGCGGCGTCGATGATGGAGGCGCGACGACGCTGCCGACGGTC CACTTCGGCGGGCTCGGCGAGCTGCACCACCACCAACACCGGCAGAGCCAGGCGCCGCTG TCCCTCTCGCTCCACAGGCCGGAGGCGGCCGCGACGTCGCTGCTGATGCAGCAGCAGCAG CAGCACCTCCACCACCAGCCGTCGCCGCCGGCGGGCGCGGCGTCGACGTGGCAGCTGCAG CAGGGTGCGTGGCATCTCCGCGGCTCAAGGTTCCTCCTCCCGACGCAGCAGCTCCTGCAG GAGTTCTGCAGCCTCCCCGTGAAGAGCACCACCAGCCCATCATCGGCAAGCAAGGCAACC AAACCGCCGCAAGAAGAGGCCGCCAGCGGCGGAGGCTCGTCGTCGTGGACCGCGCCGACG CAGATCCAGTCCATGGACGCGGCCGAGCTGCAGCGGCTCAAGGGCAAGCTCTACACCATG CTCGAAGAGGTGGATAGGAGGTACAGGAGGTACTGCGAGCAGATGAGGGCGCTCGCGGCG TCGTTCGAGGCGGTGGCCGGGGAGAGGGCGGCGGCGTCGTACACGCGGCTGGCGTCGAGG ACGATCTCGAGGCACTTCCGGAGCCTGAGGGACGGGGTGGTGGCGCAGCTGCAGGCGGTG CGGAAGCAGCTCGGGGAGAAGGACACGGCGGTGCCCGGGATGACCAAGGGCGAGACGCCC CGCCTCCGGGTGCTCGACCAGTGCCTCCGCCAGCACAAGGCCTACCAGGCCGGCATGCTC GAGAGCCACCCATGGCGCCCCCAGCGCGGCCTCCCCGAGCGCGCCGTCTCCATCCTCCGT GCCTGGCTCTTCGAGCACTTCCTTCACCCGTACCCAAGCGACGTGGATAAGCACATCCTC GCGAGGCAGACCGGGCTATCACGTAGTCAAGTGGCGAATTGGTTCATCAACGCGAGGGTG AGGCTGTGGAAGCCAATGGTGGAGGAGATGTACGCGGAGGAGATGAAGGACGAGGAGGGC AGTGGACAGTCCACGCAGGCGAGCAACCCGCAGAACCCTAACCCTAGCAGCTACACGTCG GAGGTGCGCGGCGGCGGCGGCGGCGGCGAGGACCGCGGCGAGCAGAAGCCGTCGCGGGCG CAGCTGCTGCACGACGCCGGCTCGCTGGCCTCCGTCGTGAGCATCGGGCACGGCGGCGCG GGACGGACGATGGTCGATCACCACCATCACCAGAGCCTTAATTTTGGCACGATGGACCAG CTCGACTTCGACGCGTACGAGGCGGCCGGCGGCGGGCAGGGGTTCGGCGCCGGCGGCGGG GTGTCTCTGACGCTGGGGCTGCAGCAGCAGCACGCGGACCCGCACGACGGCGTGAACGTC GCGTTCGCCGCCGCCGCGGCGCCGCCCAATTCGTCCGGTGTCGCCGCGGAGTACCTATTC ATGGGCGGCGGCGAGCATCAGCAGCAGCTGCCTCAAACCGCCCAGTTCGGCGCCGTCATG GAAGGCGACGCCGCGTCGCACTACCGTGGCCTCAGCGCCACCGCCGCCGGGTTCCACCTC CTCCACGACCTCGCCGGGTGA

Peptide Sequence

PEP ID	Os10t0534900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:20801749:20806453:-1 gene:Os10g0534900 transcript:Os10t0534900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prep (Fragment). (Os10t0534900-01)
Sequence	MAHDPSLGYADYFAAEVDGTGATELYGLQQHQQGVGVAEMFGVRGLMPAAHAHEQSKGVG ALVVGGGGVDDGGATTLPTVHFGGLGELHHHQHRQSQAPLSLSLHRPEAAATSLLMQQQQ QHLHHQPSPPAGAASTWQLQQGAWHLRGSRFLLPTQQLLQEFCSLPVKSTTSPSSASKAT KPPQEEAASGGGSSSWTAPTQIQSMDAAELQRLKGKLYTMLEEVDRRYRRYCEQMRALAA SFEAVAGERAAASYTRLASRTISRHFRSLRDGVVAQLQAVRKQLGEKDTAVPGMTKGETP RLRVLDQCLRQHKAYQAGMLESHPWRPQRGLPERAVSILRAWLFEHFLHPYPSDVDKHIL ARQTGLSRSQVANWFINARVRLWKPMVEEMYAEEMKDEEGSGQSTQASNPQNPNPSSYTS EVRGGGGGGEDRGEQKPSRAQLLHDAGSLASVVSIGHGGAGRTMVDHHHHQSLNFGTMDQ LDFDAYEAAGGGQGFGAGGGVSLTLGLQQQHADPHDGVNVAFAAAAAPPNSSGVAAEYLF MGGGEHQQQLPQTAQFGAVMEGDAASHYRGLSATAAGFHLLHDLAG

Transcript Sequence

Transcript ID	Os10t0534900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20801749:20806453:-1 gene:Os10g0534900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prep (Fragment). (Os10t0534900-01)
Sequence	GCTTCTCCCCTTTATTTTCTCTCCCTTTCCTCTCGGTGCGCTTCCCTTCCTAGGCTTAGC TATAGCTCATCTCTCCTCTCCTCCACCTCGACCTTCTCTTGCTTTCCTCCACTTTTGTTG CTCTCAGCTTTTCGCCTTTTCACCAATCCCCGCACCGCCACAGATCGAGGGAGAGTGAGC TCTCGCGTGCCACGGCTCGAGGTGGTCGTGCGTGATTTGATCGATATCCATGGCGCACGA TCCGAGCCTAGGGTACGCGGATTACTTCGCGGCGGAGGTGGATGGCACCGGCGCCACGGA GTTGTATGGGTTGCAGCAGCATCAGCAGGGGGTTGGGGTGGCGGAGATGTTCGGGGTGAG GGGGCTCATGCCGGCAGCGCACGCGCACGAGCAGAGCAAGGGTGTGGGCGCGCTCGTCGT CGGCGGCGGCGGCGTCGATGATGGAGGCGCGACGACGCTGCCGACGGTCCACTTCGGCGG GCTCGGCGAGCTGCACCACCACCAACACCGGCAGAGCCAGGCGCCGCTGTCCCTCTCGCT CCACAGGCCGGAGGCGGCCGCGACGTCGCTGCTGATGCAGCAGCAGCAGCAGCACCTCCA CCACCAGCCGTCGCCGCCGGCGGGCGCGGCGTCGACGTGGCAGCTGCAGCAGGGTGCGTG GCATCTCCGCGGCTCAAGGTTCCTCCTCCCGACGCAGCAGCTCCTGCAGGAGTTCTGCAG CCTCCCCGTGAAGAGCACCACCAGCCCATCATCGGCAAGCAAGGCAACCAAACCGCCGCA AGAAGAGGCCGCCAGCGGCGGAGGCTCGTCGTCGTGGACCGCGCCGACGCAGATCCAGTC CATGGACGCGGCCGAGCTGCAGCGGCTCAAGGGCAAGCTCTACACCATGCTCGAAGAGGT GGATAGGAGGTACAGGAGGTACTGCGAGCAGATGAGGGCGCTCGCGGCGTCGTTCGAGGC GGTGGCCGGGGAGAGGGCGGCGGCGTCGTACACGCGGCTGGCGTCGAGGACGATCTCGAG GCACTTCCGGAGCCTGAGGGACGGGGTGGTGGCGCAGCTGCAGGCGGTGCGGAAGCAGCT CGGGGAGAAGGACACGGCGGTGCCCGGGATGACCAAGGGCGAGACGCCCCGCCTCCGGGT GCTCGACCAGTGCCTCCGCCAGCACAAGGCCTACCAGGCCGGCATGCTCGAGAGCCACCC ATGGCGCCCCCAGCGCGGCCTCCCCGAGCGCGCCGTCTCCATCCTCCGTGCCTGGCTCTT CGAGCACTTCCTTCACCCGTACCCAAGCGACGTGGATAAGCACATCCTCGCGAGGCAGAC CGGGCTATCACGTAGTCAAGTGGCGAATTGGTTCATCAACGCGAGGGTGAGGCTGTGGAA GCCAATGGTGGAGGAGATGTACGCGGAGGAGATGAAGGACGAGGAGGGCAGTGGACAGTC CACGCAGGCGAGCAACCCGCAGAACCCTAACCCTAGCAGCTACACGTCGGAGGTGCGCGG CGGCGGCGGCGGCGGCGAGGACCGCGGCGAGCAGAAGCCGTCGCGGGCGCAGCTGCTGCA CGACGCCGGCTCGCTGGCCTCCGTCGTGAGCATCGGGCACGGCGGCGCGGGACGGACGAT GGTCGATCACCACCATCACCAGAGCCTTAATTTTGGCACGATGGACCAGCTCGACTTCGA CGCGTACGAGGCGGCCGGCGGCGGGCAGGGGTTCGGCGCCGGCGGCGGGGTGTCTCTGAC GCTGGGGCTGCAGCAGCAGCACGCGGACCCGCACGACGGCGTGAACGTCGCGTTCGCCGC CGCCGCGGCGCCGCCCAATTCGTCCGGTGTCGCCGCGGAGTACCTATTCATGGGCGGCGG CGAGCATCAGCAGCAGCTGCCTCAAACCGCCCAGTTCGGCGCCGTCATGGAAGGCGACGC CGCGTCGCACTACCGTGGCCTCAGCGCCACCGCCGCCGGGTTCCACCTCCTCCACGACCT CGCCGGGTGACCCGTCGCACATCAAACAGGTGGTAGACCGATCGACACGCGCGCCGTACG ACGGAACCAATTGCCGGCGACCCCTCCTGTACGCGCGTGCGTGCGTGCACAGGCCGATCA ATGTCCAATTTCGCGCATGCTTGGGGGGTGGGGATTAATTGGGGGGGAGTTAGCTAGCTA GCTCTAGCTAGGTTGATGTGATTGACGGGGACGCGCCACCGGCAAAGCTCTCGCTCTCGC GCGCGGGCGCGCGGGCGACACCGGCATTGGCGCGGCGAGAGAGGGGGGTGCGCGTTGTGT CCCTCTCCTGTACAAGTACGTATACGCTGCTTTGGATTTATTTTTGTAGTAGCGATTAGA CATCTCGTCGCTCGATGGAATTAATTAATTTTCTTGGCAGCGCGTCTCTGTCTACGT