Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0534700-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:20796326:20798763:-1 gene:Os10g0534700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF604 family protein. (Os10t0534700-01)
Sequence

ATGGTGGGAGGAGGAGGAGGAGCCGGAGAGAAGCCGCCGGCGTCCAATGGCGTGCACGGT
TCCGGCAAGGCCAGGTTCACCCTTCTCTACGGCCTCCTCCTCTACGTCGTCATGCCGGTG
CTCTTCCTGTACATGCTCGTCGCCGCCGCCACCCCGTTCTACAACCCCCGCTGCTCGCCG
GAGTCCAACGCCGCCATGGCACGCTTCGTCGTGGCCATGCCCAACGCCTCGTCGGTGAAC
GGCTCTTCACCGTCGTCTTCGTCCCCGCCTCCGACGCCGGTGAGGCCGATGCGGTCCGCG
GACGAGGCGCCGACGGGGCTGCGGCACATCGCGTTCGGCATCGGCGCGTCGTCGGCGCTG
TGGAAGAGCCGGAAGGAGTACATCAAGCTGTGGTGGCGGCCGGGGCGGATGCGCGGGTTC
GTGTGGATGGACAGGCCGGTGGAGGAGTTCTACTCCAAGAGCTCCCGCACGGGGCTCCCG
CCGATCATGGTCAGCTCCGACACGTCCAAGTTCCCCTACACCCACGGCGCCGGGAGCCGG
TCGGCGCTGCGGATCTCCCGCATCGTCTCCGAGACGTTCCGGCTCGGCCTCCCCGGCGTC
CGGTGGTTCGTCATGGGCGACGACGACACGGTGTTCCTCCCGGAGAACCTGGTGCACGTG
CTCTCGCAGTACGACCACCGGCAGCCGTACTACATCGGGTCGCCGTCGGAGAGCCACATC
CAGAACCTCATCTTCTCCTACGGCATGGCGTTCGGCGGCGGGGGCTTCGCCATCAGCCGC
GCGCTCGCCGAGGAGCTCGCCAAGATGCAGGACGGTTGCCTCCACCGCTACCCGGCGCTG
TACGGCAGCGACGACCGCATCCACGCGTGCATGTCGGAGCTCGGCGTGCCGCTCACGCGC
CACCCGGGTTTCCACCAGTGCGACCTGTGGGGCGACGTGCTCGGCCTCCTCGGCGCCCAC
CCGGTGGCGCCGCTGGTGACGCTCCACCACCTCGACTTCCTCGAGCCGGTGTTCCCGACG
ACCCCGTCGCGCGCCGGCGCGCTGCGCAAGCTGTTCGACGGGCCGGTGCGGCTGGACTCG
GCGGCGGTGGCGCAGCAGTCGGTGTGCTACGACCGGGAGCACCACTGGACGGTGTCGGTG
TCGTGGGGGTTCGCCGTGATGGTGGTGCGCGGCGTGCTGTCGCCGCGGGAGATGGAGACG
CCGATGCGCTCCTTCCTCAACTGGTACAAGCGCGCCGACTACACGGCCTACTCGTTCAAC
ACGCGGCCCGTGGCGAGGCAGCCGTGCCAGAAGCCTCGCGTCTACTACATGCGCGACTCC
CGGATGGACCGCCGCCGCAACGTCACCGTCACGGAGTACGACCGCCACCGCGGCAAGCAG
CCCGACTGCCGGTGGCGCATCCCCGACCCCGCCGCCCTCGTCGACCACATCGTCGTCCTC
AAGAAACCCGACCCCGACCTCTGGAAAAGGTCGCCGAGGAGGAATTGCTGCCAGGTGGTG
TCGTCGCCGACGAAGGCAGGGAAAAACCGGACGATGACCATCGAGGTCGGCGTGTGCAGG
GAAGGCGAGTTCGCCAAGCTTTAA

Peptide Sequence

PEP ID

Os10t0534700-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:20796326:20798763:-1 gene:Os10g0534700 transcript:Os10t0534700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF604 family protein. (Os10t0534700-01)
Sequence

MVGGGGGAGEKPPASNGVHGSGKARFTLLYGLLLYVVMPVLFLYMLVAAATPFYNPRCSP
ESNAAMARFVVAMPNASSVNGSSPSSSSPPPTPVRPMRSADEAPTGLRHIAFGIGASSAL
WKSRKEYIKLWWRPGRMRGFVWMDRPVEEFYSKSSRTGLPPIMVSSDTSKFPYTHGAGSR
SALRISRIVSETFRLGLPGVRWFVMGDDDTVFLPENLVHVLSQYDHRQPYYIGSPSESHI
QNLIFSYGMAFGGGGFAISRALAEELAKMQDGCLHRYPALYGSDDRIHACMSELGVPLTR
HPGFHQCDLWGDVLGLLGAHPVAPLVTLHHLDFLEPVFPTTPSRAGALRKLFDGPVRLDS
AAVAQQSVCYDREHHWTVSVSWGFAVMVVRGVLSPREMETPMRSFLNWYKRADYTAYSFN
TRPVARQPCQKPRVYYMRDSRMDRRRNVTVTEYDRHRGKQPDCRWRIPDPAALVDHIVVL
KKPDPDLWKRSPRRNCCQVVSSPTKAGKNRTMTIEVGVCREGEFAKL

Transcript Sequence

Transcript ID

Os10t0534700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:20796326:20798763:-1 gene:Os10g0534700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF604 family protein. (Os10t0534700-01)
Sequence

ATTGACCAGGCCATGGAGGCATGCAGAGAGAGAAGCTCTCTCTCACTCACTCGCTCGCCA
CACACCATCACCCATGCGCGCTAATTAACCTCTTTTAGCAACTGGATCTCGATCGCCGAT
CAAGCCTGGCCATTGCGCGCGGCTACGACGACGAGGAGGTCGCCATGGTGGGAGGAGGAG
GAGGAGCCGGAGAGAAGCCGCCGGCGTCCAATGGCGTGCACGGTTCCGGCAAGGCCAGGT
TCACCCTTCTCTACGGCCTCCTCCTCTACGTCGTCATGCCGGTGCTCTTCCTGTACATGC
TCGTCGCCGCCGCCACCCCGTTCTACAACCCCCGCTGCTCGCCGGAGTCCAACGCCGCCA
TGGCACGCTTCGTCGTGGCCATGCCCAACGCCTCGTCGGTGAACGGCTCTTCACCGTCGT
CTTCGTCCCCGCCTCCGACGCCGGTGAGGCCGATGCGGTCCGCGGACGAGGCGCCGACGG
GGCTGCGGCACATCGCGTTCGGCATCGGCGCGTCGTCGGCGCTGTGGAAGAGCCGGAAGG
AGTACATCAAGCTGTGGTGGCGGCCGGGGCGGATGCGCGGGTTCGTGTGGATGGACAGGC
CGGTGGAGGAGTTCTACTCCAAGAGCTCCCGCACGGGGCTCCCGCCGATCATGGTCAGCT
CCGACACGTCCAAGTTCCCCTACACCCACGGCGCCGGGAGCCGGTCGGCGCTGCGGATCT
CCCGCATCGTCTCCGAGACGTTCCGGCTCGGCCTCCCCGGCGTCCGGTGGTTCGTCATGG
GCGACGACGACACGGTGTTCCTCCCGGAGAACCTGGTGCACGTGCTCTCGCAGTACGACC
ACCGGCAGCCGTACTACATCGGGTCGCCGTCGGAGAGCCACATCCAGAACCTCATCTTCT
CCTACGGCATGGCGTTCGGCGGCGGGGGCTTCGCCATCAGCCGCGCGCTCGCCGAGGAGC
TCGCCAAGATGCAGGACGGTTGCCTCCACCGCTACCCGGCGCTGTACGGCAGCGACGACC
GCATCCACGCGTGCATGTCGGAGCTCGGCGTGCCGCTCACGCGCCACCCGGGTTTCCACC
AGTGCGACCTGTGGGGCGACGTGCTCGGCCTCCTCGGCGCCCACCCGGTGGCGCCGCTGG
TGACGCTCCACCACCTCGACTTCCTCGAGCCGGTGTTCCCGACGACCCCGTCGCGCGCCG
GCGCGCTGCGCAAGCTGTTCGACGGGCCGGTGCGGCTGGACTCGGCGGCGGTGGCGCAGC
AGTCGGTGTGCTACGACCGGGAGCACCACTGGACGGTGTCGGTGTCGTGGGGGTTCGCCG
TGATGGTGGTGCGCGGCGTGCTGTCGCCGCGGGAGATGGAGACGCCGATGCGCTCCTTCC
TCAACTGGTACAAGCGCGCCGACTACACGGCCTACTCGTTCAACACGCGGCCCGTGGCGA
GGCAGCCGTGCCAGAAGCCTCGCGTCTACTACATGCGCGACTCCCGGATGGACCGCCGCC
GCAACGTCACCGTCACGGAGTACGACCGCCACCGCGGCAAGCAGCCCGACTGCCGGTGGC
GCATCCCCGACCCCGCCGCCCTCGTCGACCACATCGTCGTCCTCAAGAAACCCGACCCCG
ACCTCTGGAAAAGGTCGCCGAGGAGGAATTGCTGCCAGGTGGTGTCGTCGCCGACGAAGG
CAGGGAAAAACCGGACGATGACCATCGAGGTCGGCGTGTGCAGGGAAGGCGAGTTCGCCA
AGCTTTAATTAGTAGCGGGATTAATTAGGAGAGGAGAAGAGGGATTAGCGGCGGCAGAAG
AGGTCCCGGGCAAAAGAGAGGATGGAGATTAACGACCAGAAGTTAATCCACTGGGACCGA
GTAATAGCTCATTAGCATTAGATCGCCACACGGCGATGTGTTGTTTAATTAGCGCGGCGG
GTGTAAGCATGCACGCCGGGACTATTTTGATCTCTTCACTAGTTCACTTACATATTGAAC
CAACTCACCCACGAACCGGGGCTTTTTTTTTGCCTTTTCCTCTGCTGAGCAGAGCAGGAG
AGGAAACAGCCGGAGTTTCACAAATCTTGTGTGGTGTCAGAACGATTCAACAATGGCAAT
ACAAAACACTCATAGTTCTTT