Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0534500-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:20792529:20795403:-1 gene:Os10g0534500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Catharanthus roseus receptor-like kinase1-like kinase 16 description:Similar to Resistance protein candidate (Fragment). (Os10t0534500-01);Similar to Resistance protein candidate (Fragment). (Os10t0534500-02)
Sequence	ATGGCTGCGATCGTTTTGCTGCTCTTCCTTGTCGTGGGCTTGATGCCGGTTTCCAATGGG CAGACGACGCCCTTCTCCCCGCGATTCTCCGTCTACCTCGCGTGCGGCGCCGGCGGGAAC GTCGTCGTGACGTCGGACTCGCCGCAGCGGACTTTCGTCCCGGACGACGGCGAGCTGTCC GGGAAGTCCGCGAGGTTCAGCAACCCCGACGCGAGCCCGCCGTCCCCTCTCTACGCCGCG GCGCGCGCGGGGACGAGCGGCTTCTCGTACCGGCTCAGCTACGCTGCCGACGCGGCGCCC GACGGCAACACCACGCTCGTCCTCCGCCTCCACTTCTTCCCCTTCGCGTCGCAGTCCGGC GACCTCCTCTCGGCGCGGTTCAGCGTCTCGGCCATGGGGAGGTACGTCCTCCTGCCTCCT TCCTTCTCGCCGCCGCGCGCCGGCGTGGTGAGGGAGTTCCTCCTCCCGTCCGATGGCTCC GGCGAGTTCGACGTCGCCTTCACGCCCGAATCAGGGGGGCTCGCCTTCGTCAACGCCATC GAGCTGTTCCCCGCGCCGCAGGAGCTTCTGTGGAAGTTCCCCCTGACGGCGGTCAACACC GACGTCTCGCCGTCGCATCAGGCGCTGGAGACGCTGTACCGGCTCAACGTCGGCGGGCCA ACGGTGACGCCGACGGGCGACACCATGTGGCGAACATGGCTCCCCGACGACTCCTACCTC TCCCCGGCGACGGTCTCGGCGGTGGCCAGCATCCAGGGCCAGATCATCTTCGACCGGGCG CAGGGCTACACGCAGATGGTCGCGCCGGACGCCGTGTACAAGTCGCAGCGCACGACGAAC TCGACCACGTCGAACGTGACATGGACGTTCGCCGTCGACGGCAACAGCAGCTACGTCGTC CGCCTCCACTTCTGCGCCTTCGAGGAGCTCAGCTCCGTCATCGGAGAAGGCGTCGATTTC AATGTTTATCTGATGCAAGCCATGGGTACCCGGGAATTGAAGGCCAAGGACTACGCGACG CTGAGCAGTCCGACCCAAGCTTTCTACATGGACTATGTCGCCGTGGTCCCGACCGCCGGC GAGAACCTCACGGTGAGCATCGGCAGGGCGGCGAGCAGCGACAGCAAGAAGGCGATACTG AACGGGCTGGAGATCATGAAGCTCAGAGCCGTTGATATGACTCCGGCGAGCTCGTCCGGC AAGACGAGCAAGGTCGTCGTCGTAGCCGTGACCGCGGCGGTGCTCGGCGCGGCGGTTCTA GCAGGTGTGGCATTGTGCGTACTGCTTGTGCGGCGGAGACAGCGGCGGGCGACGCTGCCT GTGCCGGAGGAGGAGGAGAAGGAGAGCGTGGGGACGCCGTGGTCGCCGTTCACGCCGGAC GGCGAGGGCTCGTTCGGCAGCGCCGTGGTCACGCCGCGGAGGATGAACATGAAGCTCCAC ATCCCGCTCGCCGAGATCATGGTGGCGACGGGGGACTTCGACGACGCAAACATCCTCGGC GTCGGCGGGTTCGGGAACGTGTACCGCGGCGTGCTCCGCGACGGCACCCGCGTCGCCGTG AAGCGCGCCAAGCGCGCGTCCAGGCAGGGGTTCCCGGAGTTCCAGACTGAGATCCTGGTG CTCTCCAGCATCCGCCACCGCCACCTCGTCTCGCTCATCGGCTACTGCAACGAGCGGTCG GAGATGATCCTCGTGTACGAGCTCATGGCGCACGGCACCCTGAGGAGCCACCTGTACGGC TCCGACGCCGCGGCGGCGACGCCGCCGCCGCTGTCGTGGAAGCAGCGGCTGGAGATCTGC ATCGGCGCGGCGAAGGGGCTCCACTACCTGCACACCGGCCACTCCGATAACATCATCCAC CGCGACGTCAAGTCGACGAACATCCTCCTCGGCGACGGCTTCGTGGCGAAGGTGGCCGAC TTCGGGCTGTCCCGCGTCGGGCCATCGACGGGGCAGACGCACGTGAGCACGGCGGTGAAG GGCAGCTTCGGCTACCTCGACCCGGAGTACTTCAAGACGCGGCAGCTCACCGACCGCTCC GACGTCTACTCCTTCGGCGTCGTCCTCTTCGAGGTGCTGTGCGCGCGGCCGGCGATCGAC CAGAGCCTCCCGCCCGACGAGATCAACCTCGCGGAGTGGGCGATGCAGTGGAGCCGGAGG GGCCGGTTCGACAAGATCGTCGACCCGGCCGTCGCCGGCGACGCCAGCACGAACTCGCTC CGGAAGTTCGCGGAGACCGCCGGGAGGTGCCTCGCGGACTACGGCGAGCAGCGGCCGTCC ATGGGCGACGTGGTGTGGAACCTCGAGTACTGCCTCCAGCTGCAGGAGAGCCAGCCGAGC ACCGAGACGGCGCTGGACTTGGACGACAGCGGCGCGCACCTGCCACGGGACATCGTCGTG GCGAGGCGAGTGGCGCCGCTCGCGCCCGATGCTTCGGCGGACGCCGCCGGAGACGACATG AGCTGGTCGGAGACGGCGAGCTTCACGGCGACGGGCAACGTGTTCTCGCAGATTATGTCC CGCGATGGTAGATGA

Peptide Sequence

PEP ID	Os10t0534500-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:20792529:20795403:-1 gene:Os10g0534500 transcript:Os10t0534500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Catharanthus roseus receptor-like kinase1-like kinase 16 description:Similar to Resistance protein candidate (Fragment). (Os10t0534500-01);Similar to Resistance protein candidate (Fragment). (Os10t0534500-02)
Sequence	MAAIVLLLFLVVGLMPVSNGQTTPFSPRFSVYLACGAGGNVVVTSDSPQRTFVPDDGELS GKSARFSNPDASPPSPLYAAARAGTSGFSYRLSYAADAAPDGNTTLVLRLHFFPFASQSG DLLSARFSVSAMGRYVLLPPSFSPPRAGVVREFLLPSDGSGEFDVAFTPESGGLAFVNAI ELFPAPQELLWKFPLTAVNTDVSPSHQALETLYRLNVGGPTVTPTGDTMWRTWLPDDSYL SPATVSAVASIQGQIIFDRAQGYTQMVAPDAVYKSQRTTNSTTSNVTWTFAVDGNSSYVV RLHFCAFEELSSVIGEGVDFNVYLMQAMGTRELKAKDYATLSSPTQAFYMDYVAVVPTAG ENLTVSIGRAASSDSKKAILNGLEIMKLRAVDMTPASSSGKTSKVVVVAVTAAVLGAAVL AGVALCVLLVRRRQRRATLPVPEEEEKESVGTPWSPFTPDGEGSFGSAVVTPRRMNMKLH IPLAEIMVATGDFDDANILGVGGFGNVYRGVLRDGTRVAVKRAKRASRQGFPEFQTEILV LSSIRHRHLVSLIGYCNERSEMILVYELMAHGTLRSHLYGSDAAAATPPPLSWKQRLEIC IGAAKGLHYLHTGHSDNIIHRDVKSTNILLGDGFVAKVADFGLSRVGPSTGQTHVSTAVK GSFGYLDPEYFKTRQLTDRSDVYSFGVVLFEVLCARPAIDQSLPPDEINLAEWAMQWSRR GRFDKIVDPAVAGDASTNSLRKFAETAGRCLADYGEQRPSMGDVVWNLEYCLQLQESQPS TETALDLDDSGAHLPRDIVVARRVAPLAPDASADAAGDDMSWSETASFTATGNVFSQIMS RDGR

Transcript Sequence

Transcript ID	Os10t0534500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20792529:20795403:-1 gene:Os10g0534500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Catharanthus roseus receptor-like kinase1-like kinase 16 description:Similar to Resistance protein candidate (Fragment). (Os10t0534500-01);Similar to Resistance protein candidate (Fragment). (Os10t0534500-02)
Sequence	GTGCGGATGGCTGCGATCGTTTTGCTGCTCTTCCTTGTCGTGGGCTTGATGCCGGTTTCC AATGGGCAGACGACGCCCTTCTCCCCGCGATTCTCCGTCTACCTCGCGTGCGGCGCCGGC GGGAACGTCGTCGTGACGTCGGACTCGCCGCAGCGGACTTTCGTCCCGGACGACGGCGAG CTGTCCGGGAAGTCCGCGAGGTTCAGCAACCCCGACGCGAGCCCGCCGTCCCCTCTCTAC GCCGCGGCGCGCGCGGGGACGAGCGGCTTCTCGTACCGGCTCAGCTACGCTGCCGACGCG GCGCCCGACGGCAACACCACGCTCGTCCTCCGCCTCCACTTCTTCCCCTTCGCGTCGCAG TCCGGCGACCTCCTCTCGGCGCGGTTCAGCGTCTCGGCCATGGGGAGGTACGTCCTCCTG CCTCCTTCCTTCTCGCCGCCGCGCGCCGGCGTGGTGAGGGAGTTCCTCCTCCCGTCCGAT GGCTCCGGCGAGTTCGACGTCGCCTTCACGCCCGAATCAGGGGGGCTCGCCTTCGTCAAC GCCATCGAGCTGTTCCCCGCGCCGCAGGAGCTTCTGTGGAAGTTCCCCCTGACGGCGGTC AACACCGACGTCTCGCCGTCGCATCAGGCGCTGGAGACGCTGTACCGGCTCAACGTCGGC GGGCCAACGGTGACGCCGACGGGCGACACCATGTGGCGAACATGGCTCCCCGACGACTCC TACCTCTCCCCGGCGACGGTCTCGGCGGTGGCCAGCATCCAGGGCCAGATCATCTTCGAC CGGGCGCAGGGCTACACGCAGATGGTCGCGCCGGACGCCGTGTACAAGTCGCAGCGCACG ACGAACTCGACCACGTCGAACGTGACATGGACGTTCGCCGTCGACGGCAACAGCAGCTAC GTCGTCCGCCTCCACTTCTGCGCCTTCGAGGAGCTCAGCTCCGTCATCGGAGAAGGCGTC GATTTCAATGTTTATCTGATGCAAGCCATGGGTACCCGGGAATTGAAGGCCAAGGACTAC GCGACGCTGAGCAGTCCGACCCAAGCTTTCTACATGGACTATGTCGCCGTGGTCCCGACC GCCGGCGAGAACCTCACGGTGAGCATCGGCAGGGCGGCGAGCAGCGACAGCAAGAAGGCG ATACTGAACGGGCTGGAGATCATGAAGCTCAGAGCCGTTGATATGACTCCGGCGAGCTCG TCCGGCAAGACGAGCAAGGTCGTCGTCGTAGCCGTGACCGCGGCGGTGCTCGGCGCGGCG GTTCTAGCAGGTGTGGCATTGTGCGTACTGCTTGTGCGGCGGAGACAGCGGCGGGCGACG CTGCCTGTGCCGGAGGAGGAGGAGAAGGAGAGCGTGGGGACGCCGTGGTCGCCGTTCACG CCGGACGGCGAGGGCTCGTTCGGCAGCGCCGTGGTCACGCCGCGGAGGATGAACATGAAG CTCCACATCCCGCTCGCCGAGATCATGGTGGCGACGGGGGACTTCGACGACGCAAACATC CTCGGCGTCGGCGGGTTCGGGAACGTGTACCGCGGCGTGCTCCGCGACGGCACCCGCGTC GCCGTGAAGCGCGCCAAGCGCGCGTCCAGGCAGGGGTTCCCGGAGTTCCAGACTGAGATC CTGGTGCTCTCCAGCATCCGCCACCGCCACCTCGTCTCGCTCATCGGCTACTGCAACGAG CGGTCGGAGATGATCCTCGTGTACGAGCTCATGGCGCACGGCACCCTGAGGAGCCACCTG TACGGCTCCGACGCCGCGGCGGCGACGCCGCCGCCGCTGTCGTGGAAGCAGCGGCTGGAG ATCTGCATCGGCGCGGCGAAGGGGCTCCACTACCTGCACACCGGCCACTCCGATAACATC ATCCACCGCGACGTCAAGTCGACGAACATCCTCCTCGGCGACGGCTTCGTGGCGAAGGTG GCCGACTTCGGGCTGTCCCGCGTCGGGCCATCGACGGGGCAGACGCACGTGAGCACGGCG GTGAAGGGCAGCTTCGGCTACCTCGACCCGGAGTACTTCAAGACGCGGCAGCTCACCGAC CGCTCCGACGTCTACTCCTTCGGCGTCGTCCTCTTCGAGGTGCTGTGCGCGCGGCCGGCG ATCGACCAGAGCCTCCCGCCCGACGAGATCAACCTCGCGGAGTGGGCGATGCAGTGGAGC CGGAGGGGCCGGTTCGACAAGATCGTCGACCCGGCCGTCGCCGGCGACGCCAGCACGAAC TCGCTCCGGAAGTTCGCGGAGACCGCCGGGAGGTGCCTCGCGGACTACGGCGAGCAGCGG CCGTCCATGGGCGACGTGGTGTGGAACCTCGAGTACTGCCTCCAGCTGCAGGAGAGCCAG CCGAGCACCGAGACGGCGCTGGACTTGGACGACAGCGGCGCGCACCTGCCACGGGACATC GTCGTGGCGAGGCGAGTGGCGCCGCTCGCGCCCGATGCTTCGGCGGACGCCGCCGGAGAC GACATGAGCTGGTCGGAGACGGCGAGCTTCACGGCGACGGGCAACGTGTTCTCGCAGATT ATGTCCCGCGATGGTAGATGAGCAGAGTAGTCGCCTTTATAATGAGGAATCTGGTGGCGC ACGATTACAAAAGGAGGTCAAAAGCCACGACACAATGGCAGGAAATTTTTAAAATGTTCC AAGATTTTGGTTACCTTTTCAATACGAATTTAAATCGGATTTGATGCCAATTCGAGAGGA TTTTATCTGTTCAGTGTGAGTTGGAGTTCGAATTTGAATAGAATTTCCTCTCCTTTGCCG AGAGCACCGCTGCCAGGAGCTTTGTAGTAGGCGCTTGCCCTTCGGGCCCAGATAACTTTT TTTATTTTAAGATATTGATTACCTTTCAATATGAATTGAAATCGAATTTGATGCT