Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0533600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:20756189:20759946:1 gene:Os10g0533600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MITOGEN-ACTIVATED PROTEIN KINASE 6 description:Similar to Mitogen-activated protein kinase homolog MMK2 (EC 2.7.1.37). (Os10t0533600-01)
Sequence	ATGGATTCCTCCTCCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGG ACGCACGGGGGCCGCTACGTGCTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCC AAGTACGCCCCTCCCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCT GTTAACTCGGAGAACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAAC CATATCGATGCCAAGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAG AATATTATTGCCATAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTT TACATTGTTTCTGAGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCA TTGACTGATGACCACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTG CACTCGGCAAATGTCTTGCACCGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAAT TGTGATCTCAAGATTGCTGATTTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATG ACAGAGTATGTGGTCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAG TATACTGCTGCTATTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGT CAACCCCTGTTTCCTGGAAGGGATTACATTCAGCAACTAAAATTGATCACTGAGCTGATA GGGTCGCCAGATGACTCAAGCCTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATG AAACAGCTACCACAGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCT GGTGCAGTCGATCTGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTT GATGAGGCTCTTCATCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCCACC TGCCCAGCACCTTTCAGCTTTGATTTTGAGCAACCATCCTTTACTGAAGAACATATAAAA GAACTCATCTGGAGGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAA

Peptide Sequence

PEP ID	Os10t0533600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:20756189:20759946:1 gene:Os10g0533600 transcript:Os10t0533600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MITOGEN-ACTIVATED PROTEIN KINASE 6 description:Similar to Mitogen-activated protein kinase homolog MMK2 (EC 2.7.1.37). (Os10t0533600-01)
Sequence	MDSSSGGAGGGGGAQIKGMGTHGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIVCAA VNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRRDNFNDV YIVSELMDTDLHQIIRSNQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNAN CDLKIADFGLARTTTETDLMTEYVVTRWYRAPELLLNCSQYTAAIDVWSVGCILGEIVTR QPLFPGRDYIQQLKLITELIGSPDDSSLGFLRSDNARRYMKQLPQYPRQDFRLRFRNMSA GAVDLLEKMLVFDPSRRITVDEALHHPYLASLHDINEEPTCPAPFSFDFEQPSFTEEHIK ELIWRESLAFNPDPPY

Transcript Sequence

Transcript ID	Os10t0533600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20756189:20759946:1 gene:Os10g0533600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MITOGEN-ACTIVATED PROTEIN KINASE 6 description:Similar to Mitogen-activated protein kinase homolog MMK2 (EC 2.7.1.37). (Os10t0533600-01)
Sequence	ATTCCGCGGTCGCCGCCCGAGTCAAAAAGAGGGGGAAGCTTCTCCCACCATAGTCCTCCT CCTCCTCCTCCTACTCCCATCAACGACTAGTCGCGGCGACCAAGAGCCAAACCCTACGCC TCCTCCCCTCCCCCTCCACCTCGTCCTCCCCGCGAGCGGCGGCGGCCATGGATTCCTCCT CCGGCGGCGCGGGCGGCGGCGGCGGCGCGCAGATCAAGGGGATGGGGACGCACGGGGGCC GCTACGTGCTGTACAACGTGTACGGGAACTTCTTCGAGGTCTCCTCCAAGTACGCCCCTC CCATCCGCCCCATCGGCCGGGGCGCCTACGGCATTGTCTGCGCGGCTGTTAACTCGGAGA ACGGCGAGGAAGTTGCCATCAAGAAGATTGGCAATGCATTCGACAACCATATCGATGCCA AGCGGACACTGAGAGAAATCAAGCTGCTTCGCCACATGGACCACGAGAATATTATTGCCA TAAAGGACATAATTCGCCCCCCAAGAAGAGACAACTTTAATGATGTTTACATTGTTTCTG AGTTGATGGATACTGATCTCCATCAGATCATACGCTCAAATCAACCATTGACTGATGACC ACTGCCAGTACTTCCTGTACCAGTTGCTACGAGGGCTAAAATATGTGCACTCGGCAAATG TCTTGCACCGTGATCTGAAGCCAAGCAATTTGTTCCTTAATGCAAATTGTGATCTCAAGA TTGCTGATTTTGGGCTTGCAAGAACCACTACGGAGACTGACCTCATGACAGAGTATGTGG TCACTCGTTGGTATCGAGCACCAGAGCTGCTGTTGAACTGCTCGCAGTATACTGCTGCTA TTGATGTCTGGTCAGTTGGATGCATACTTGGTGAAATTGTGACTCGTCAACCCCTGTTTC CTGGAAGGGATTACATTCAGCAACTAAAATTGATCACTGAGCTGATAGGGTCGCCAGATG ACTCAAGCCTAGGGTTTCTTCGGAGTGATAATGCAAGAAGATACATGAAACAGCTACCAC AGTACCCAAGGCAGGACTTCCGCTTGCGCTTCCGCAACATGTCTGCTGGTGCAGTCGATC TGTTAGAGAAAATGCTGGTGTTTGACCCAAGCAGACGGATAACTGTTGATGAGGCTCTTC ATCACCCATACTTGGCTTCTCTTCATGACATCAATGAAGAACCCACCTGCCCAGCACCTT TCAGCTTTGATTTTGAGCAACCATCCTTTACTGAAGAACATATAAAAGAACTCATCTGGA GGGAATCCTTGGCATTTAATCCGGATCCTCCCTACTAAGAGCTCAGAGCAATTTATCAAT GCTGGCATCTGAAGATCGGTAGCTCTAGAAAAGCCAAATCCCCTTGCTTTGTGCATCTAT TAATTTTATGCCCACTTGTTGGGCGAATGAGCATGGATTATTGTTATAGTGACAATTTTT CTTAAGGCCTGTCTAAAGAAACAACATTTGTATTCCTTATCAGATAGCCTGAACTTGGGC CTGTATTATACCGGTTGATTGCATAACTGTTCTTATGTATCTAAGCCTGTAATTGTCTTC