Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0533000-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:20725051:20731000:1 gene:Os10g0533000 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding domain containing protein. (Os10t0533000-01)
Sequence	ATGCTGCACGGCCCGGCCCATTCGCCTCCGCCGGCCGCCGCCGCCGTCGCCGTCGCCGGC GGCGGCGGCGGGGAGCCGCTGGTGGTGACGCTCAACTGCCTGGAGGACCCGTCGATGGAG CAGGAGGTGCTCGCGGGGGCGGCGGCGGTGGAGCACGCCCCGCTCTCCGCGCTTTCATCC GGGCGCGTCGAGGCCGCCGCCGCCGTGCTCCTCACCTCGCTCGCGTTCCTCCCGCGCGCC GCGCAGCGGCGGCTCCGCCCCTGGCAGCTGATCCTCTGCCTCGGTTCCCCCGACCGCGCC GCGGACGCCGCCGTGGCCGCGGAGCTCGGGCTCCGCCTGGTCCACGTCGACGCCAACCGC GCCGAGGAGGTAGCCGACACCGTCATGGCGCTCTTCCTCGGCCTCCTCCGCCGCACCCAC CTGCTGTCCCGCCACGCCTCCTCCTACTCCGCGCCGCCCGCCGGGTGGCTCGGCTCCGTC CAGCCGCTCTGCCGCGGAATGCGGCGCTGCCGTGGGCTAGTGCTTGGTATCGTCGGGGTC AACGCCGCCGCGCGATGCCTCGCCACCCGCAGCCTCGCGTTCAGTATGAGCGTGCTCTAC TTCGATCCGCTCCATGAGGCTAATGGGAAAACAAAGCGGCCTTCTATTTTATTTCCTTCT GCTGCCAGAAGAATGGATACTCTCAATGATTTATTGACAGCAAGTGATCTTGTTTCACTT CACTGTGCGTTAACAAATGATACAACACATATACTCAATGCCGAGCGTCTGCAGCACATA AAACCTGGAGCTTTCATAGTCAATACCGGTAGCTGTCAACTGATAGATGACTGTGCACTC AAACAACTCTTAATTGATGGCACTATAGCTGGGTGCGCATTGGATGGTGCTGAAGGTCCA CAATGGATGGAAGCATGGGTGCGTGAGATGCCGAATGTATTAATTCTTCCTCGAAGTGCA GATTACAGTGAAGAAGTGTGGATTGAAATCAGAGAAAAGGCACTCGCAATATTGCAATCC TTTTTCTATGATGGTGTTGTTCCAAACAATGCTCTTTCTGATGATGAAGAAGAAATAACT GAAGCTGGATGTGAGGATGATCAGCTAGCAAAACAGGCAAAAGAACAGGTTTGCGATGGT GGACAGCAGACAGATGAAAGTCAGTTAACTTTAGAATGTGACAAGAGAAGAGCCATTTCC CACTCTGAGGAGCCCCAAGCTTCAGGGCAGTCTCAAAACAGAGAAAATGTTGTGCCCAGA TCAGAAGGAAGGCGCAGCCGATCTGGAAAGAAAGGGAAAAAGAGACCTGCTCGCCGCAAA TCACAACAGAAAAGGGACGAATTGTTGTCAACTTTAGAAGGTGGAAGTAATTACTCCTCA CGTATGGATGATGATACTGTAACGAGTGGCAAGGATCAAGTGTTAAGTTCCAGTTCACGA TTTGCTTCCCCTGAGGATTGTAAAACCAAGCTGAGATCTTCTGCCGAATTTCCAATGGAA ATAATTTCTGAAAATAAACTGACTGCAGGGCTTAGTATAAAACCTCTTGAGAGATTGAAA GATGGCTTCGTTGTTGCCCTAAGGACCAGGGATAATTCAGGGTTTCATGTTGCAAGAGAA AGAGTTGCAGGAGTTGGGTGGTATCTTGATGTTGTGTCAAAAGCTACAAAGAGGGATCCT GCTGCTCAGTTTCTAATTACTTTTAGAAACAAGGATACTATGGGCTTGCGATCTTTTGTT GCTGGTGGCAAGTTATTGCAGGTTAATAAGACTATGGAGCTTGTATTTGCGAGCTATTCT TTTGATGTTTGGGAGAGCTGGACGCTGGAGGGGTCTTTACTGGATTGTTGCAAGTTGGTC AACCGCAAAATTCCTTCGGTTGTATTGGAGGTCTATATTGAAATCCTCGCAGCTGTGAGT GAAGAAGATGGTGTCACTAGATGGCTAGATTGA

Peptide Sequence

PEP ID	Os10t0533000-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:20725051:20731000:1 gene:Os10g0533000 transcript:Os10t0533000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding domain containing protein. (Os10t0533000-01)
Sequence	MLHGPAHSPPPAAAAVAVAGGGGGEPLVVTLNCLEDPSMEQEVLAGAAAVEHAPLSALSS GRVEAAAAVLLTSLAFLPRAAQRRLRPWQLILCLGSPDRAADAAVAAELGLRLVHVDANR AEEVADTVMALFLGLLRRTHLLSRHASSYSAPPAGWLGSVQPLCRGMRRCRGLVLGIVGV NAAARCLATRSLAFSMSVLYFDPLHEANGKTKRPSILFPSAARRMDTLNDLLTASDLVSL HCALTNDTTHILNAERLQHIKPGAFIVNTGSCQLIDDCALKQLLIDGTIAGCALDGAEGP QWMEAWVREMPNVLILPRSADYSEEVWIEIREKALAILQSFFYDGVVPNNALSDDEEEIT EAGCEDDQLAKQAKEQVCDGGQQTDESQLTLECDKRRAISHSEEPQASGQSQNRENVVPR SEGRRSRSGKKGKKRPARRKSQQKRDELLSTLEGGSNYSSRMDDDTVTSGKDQVLSSSSR FASPEDCKTKLRSSAEFPMEIISENKLTAGLSIKPLERLKDGFVVALRTRDNSGFHVARE RVAGVGWYLDVVSKATKRDPAAQFLITFRNKDTMGLRSFVAGGKLLQVNKTMELVFASYS FDVWESWTLEGSLLDCCKLVNRKIPSVVLEVYIEILAAVSEEDGVTRWLD

Transcript Sequence

Transcript ID	Os10t0533000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20725051:20731000:1 gene:Os10g0533000 gene_biotype:protein_coding transcript_biotype:protein_coding description:NAD(P)-binding domain containing protein. (Os10t0533000-01)
Sequence	ACTCCGCTCCGAATCCCGACCCGAGCCGGGGCCTCTCTTCAGACGAGTGGGCCCAGGATG CTGCACGGCCCGGCCCATTCGCCTCCGCCGGCCGCCGCCGCCGTCGCCGTCGCCGGCGGC GGCGGCGGGGAGCCGCTGGTGGTGACGCTCAACTGCCTGGAGGACCCGTCGATGGAGCAG GAGGTGCTCGCGGGGGCGGCGGCGGTGGAGCACGCCCCGCTCTCCGCGCTTTCATCCGGG CGCGTCGAGGCCGCCGCCGCCGTGCTCCTCACCTCGCTCGCGTTCCTCCCGCGCGCCGCG CAGCGGCGGCTCCGCCCCTGGCAGCTGATCCTCTGCCTCGGTTCCCCCGACCGCGCCGCG GACGCCGCCGTGGCCGCGGAGCTCGGGCTCCGCCTGGTCCACGTCGACGCCAACCGCGCC GAGGAGGTAGCCGACACCGTCATGGCGCTCTTCCTCGGCCTCCTCCGCCGCACCCACCTG CTGTCCCGCCACGCCTCCTCCTACTCCGCGCCGCCCGCCGGGTGGCTCGGCTCCGTCCAG CCGCTCTGCCGCGGAATGCGGCGCTGCCGTGGGCTAGTGCTTGGTATCGTCGGGGTCAAC GCCGCCGCGCGATGCCTCGCCACCCGCAGCCTCGCGTTCAGTATGAGCGTGCTCTACTTC GATCCGCTCCATGAGGCTAATGGGAAAACAAAGCGGCCTTCTATTTTATTTCCTTCTGCT GCCAGAAGAATGGATACTCTCAATGATTTATTGACAGCAAGTGATCTTGTTTCACTTCAC TGTGCGTTAACAAATGATACAACACATATACTCAATGCCGAGCGTCTGCAGCACATAAAA CCTGGAGCTTTCATAGTCAATACCGGTAGCTGTCAACTGATAGATGACTGTGCACTCAAA CAACTCTTAATTGATGGCACTATAGCTGGGTGCGCATTGGATGGTGCTGAAGGTCCACAA TGGATGGAAGCATGGGTGCGTGAGATGCCGAATGTATTAATTCTTCCTCGAAGTGCAGAT TACAGTGAAGAAGTGTGGATTGAAATCAGAGAAAAGGCACTCGCAATATTGCAATCCTTT TTCTATGATGGTGTTGTTCCAAACAATGCTCTTTCTGATGATGAAGAAGAAATAACTGAA GCTGGATGTGAGGATGATCAGCTAGCAAAACAGGCAAAAGAACAGGTTTGCGATGGTGGA CAGCAGACAGATGAAAGTCAGTTAACTTTAGAATGTGACAAGAGAAGAGCCATTTCCCAC TCTGAGGAGCCCCAAGCTTCAGGGCAGTCTCAAAACAGAGAAAATGTTGTGCCCAGATCA GAAGGAAGGCGCAGCCGATCTGGAAAGAAAGGGAAAAAGAGACCTGCTCGCCGCAAATCA CAACAGAAAAGGGACGAATTGTTGTCAACTTTAGAAGGTGGAAGTAATTACTCCTCACGT ATGGATGATGATACTGTAACGAGTGGCAAGGATCAAGTGTTAAGTTCCAGTTCACGATTT GCTTCCCCTGAGGATTGTAAAACCAAGCTGAGATCTTCTGCCGAATTTCCAATGGAAATA ATTTCTGAAAATAAACTGACTGCAGGGCTTAGTATAAAACCTCTTGAGAGATTGAAAGAT GGCTTCGTTGTTGCCCTAAGGACCAGGGATAATTCAGGGTTTCATGTTGCAAGAGAAAGA GTTGCAGGAGTTGGGTGGTATCTTGATGTTGTGTCAAAAGCTACAAAGAGGGATCCTGCT GCTCAGTTTCTAATTACTTTTAGAAACAAGGATACTATGGGCTTGCGATCTTTTGTTGCT GGTGGCAAGTTATTGCAGGTTAATAAGACTATGGAGCTTGTATTTGCGAGCTATTCTTTT GATGTTTGGGAGAGCTGGACGCTGGAGGGGTCTTTACTGGATTGTTGCAAGTTGGTCAAC CGCAAAATTCCTTCGGTTGTATTGGAGGTCTATATTGAAATCCTCGCAGCTGTGAGTGAA GAAGATGGTGTCACTAGATGGCTAGATTGATCCATCTACCCCAGGAGCCTAGGACAATCA AAACAACTGACTCAGTATTGTCTTCTGGTTTGATTTCCTCTCAATTTTTCAATTTTAGCT ATTCTTACGCGGGGCACCTCGCAGAGCCACTGCGTATTCAATATTGTCTAGCTATCTACT CTATTGTATCAGTATTCAGTATCTCATTGCTTAATAACATTATTCAGCATCTCAAAGACA ACTAGTGTTACTTGCTGTGAAAATTTATAGCATATCTACATGCAATTGCGGATTAACCAA GAACTAATCAATCCCCTCATTACGAAATGTAGTATATACCACACTGAACTGGCAAGGTAC ACATATTTTCAGTGCTCTACTGTACTTTCTACTAGTAGCAATTTAGCATCAATGTACAGT CATTTCTTCTTCTTGGCCTTCTCGATTTCTTCCTCCCACAGCACGGGCCAGTTGGCTCGG GCCTCTTCCAGCCCGAGCAGCGACCCTTCCTTCTCCGGGTCCCAGCTCGCCGACAGCGTC CCGAAGGCGATCCCCAGCGCCGACGTGCCGAAGGCGACGAGGATGGTCAGCAGCGGCAGC CACGACGGCACGGCGACGCCCCGGCCGCGCTCCAGCGCGCCGTACAGGTTGAGCAGCCCG ACGCCGGACGCCATCGGGACGCCGACCATGAACATGATCCGGCGGAGGATGCGGTCGAAC ACCGGCTGCGGCAGCTCGTCGTCGTCCTCGTCCACCTCGCCGCCGCTCTTGACGTCCAGC GCTTCCAGCACCATCTGCCGCTGCTCCTGCTCCTTCTCCTGCCGCCGCATCCGCTGCTTC TCCTTGCGGCTCTTCTTCTTGGAAGGCGATTTGGCTGTGGTGGTGCTCTCGGTGTCCGTG ACGGCGGAGGAGCCGATGGCGCCGCCGCTGCCGGCGGCTTGTAGCCGCCGGAGTGGGGCT CGCCGTCGCTGGGGGAGTGCCACGTGAGGCGGCGAGAGGTTGGTTGTGGAGGTGTGCGTC CACGGGTGCGGTCTCGTGGTGGTTTGAGGTGGCTGGAGTGGTGTCTGGTGGAGCAAGGCT GCCATTGCCGGCGGATGGTGGTTTCGCTGGTTTGGTCGATCGGAGACGACGAGACGAGCG CACTCTGCTATGATGTTTGAGAGTTTCAGTGTGATTTAAGAGCCTTGTCGCCTAGAGCGA GTGGTGGCGCGTGAATGCGCTTTAGATATGCTTTTGGATATGGACCGGCCACACGAGAAA TATCTTTCCCAACCGGATGGTCACCGGGGCCCACTGTACAGTAGCGAGAATACACTTTCC ACTCTGTCAGCAAGGGTGAACCCTCATGTCAGTGGTGTAGAAGCACTCCTAGCTGGCACT TCTGATCTCTCGCTTGGTATCACCCAGAATGCCAGAGGAAGAAATTGCTTTGGTGTGGCC ATGACAATCCTACAACATATATATAGATATACCAATCCACAAAATTTTAGATCCAAACTC AACTTACACATTGAGATATAAAAAGTATTATTCATATATGAATTTATCTTTTTTTTTTGT TTCTCAATGTGTAGGTCAAATTTGGATTTGATTTTTAGTGAAGTACATGTCACTATATTC TACGTTGTTAATTTTTTTCAAAATTTTTTTACAGCAGTTTGTATTAGAATCCACTCCCCA ATGAAGTGCCATTTT