Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0532100-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:20681520:20685553:1 gene:Os10g0532100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein HDMA704, histone lysine-specific demethylase 704, polyamine oxidase 11 description:Similar to Amine oxidase, flavin-containing. (Os10t0532100-01)
Sequence	ATTGGGGGTGAGTTGAAGGATTCAGGTGGTCTAGGGTTGGAGGACTCCTTGTCGACGCTG TTTAAGAGATCTGGTCGAAAGTCTCGACAGGTCTCTGTGAAGGAGGAAGAAGGTGTGGAA GTTGCTGGTTCACATGGTGAGGAAATTCTTGAGAAGGGATCTGGTTTGGTTTCGGATAGG GTTGCCAAGGGCACTAAACGGAGAAGGCGACGCACAAAGGAAGAAATGAAAAATGCTGCT GCAAAATCTGAAAGTGCAATGGCCCATGAAGGATCGCCCAATCGGAAAGTTGGCACCTCC TTGCCTAGAAAGGCAAAGGCAGAGGCAAAGGTGAAGATTAGTAATTCCAATAGGCGCTCA AAGAAGTCTGATGAGAAACCGAAGGCTTCAGATGATGTGTTATGTCACCGATCATTGGGA GAAACAATTGAACAAGACGCGGAGACCAGGACAGTACTGGATGATGGATCTAGAAACTCA TCTGATGGGGCCAGTCATCGCATTGAAGTTTCAGCTTGTTTAAGCAATCAGCCTTGCTTG AAACCTTGCTCAGGAGAGCTTGCTGAAGAAGTGTCTCTTAGTGCAGCAAATGCAGCCACT GATGGTGTTTCTAATGAACACACATATTCCGAAACATTATTGAAGGAAAGAAATGATGAT GCAGGTTGTTCCCATGGCAAGCCACCGACATTAGCCATAAAAAGCATACCTGGTAAAAAA CCAATAGAGATGCCCAAGAAACCTGTCCGACAAAAGGATCAGTTATTATCTACTGATGTT GACAATAAATGCGTGGTGGGCTCAGGTGACACTAAAGATGTCAATATCGAAAATCAGCCA GCTTTTGGGATCCCTGAGTCCCATGTGACTGGGAAGGGCTTGCATCCTCATAAAATGGCA ACATCTGTGAAAGAGCTGGATGTAGTTGACGTGGTAGCACCCACAGATTTCGAGGACATG GAGAATGCATCAAAATCAAAGCGTGTGACACGTAGCTCCAGAAAACGCAAGCATGGTGAC ATGGCATATGAGGGTGATATTGACTGGGAAACTCTAATGCAGGAGCAGGGGCTGTTCTCA AACCTCTCAGCAGCCTTAGTAGATTATCCTCTCAAATCAAAAGACAAAATCAAAATCTCG GAAGTTCTCGACAATGGAGATGGTAGCGGTGTTGCTGCAGTGCGTGCTGGCCTAAAGGCA AAGGCTGTTACTCCAATTGAAAAGATAAAATTCAAGGACATATTGAAGCGCAGGGGTGGC CTTCAGGAATACCTGGAATGCAGGAACATGATTCTAAGTCGATGGTGCAAGGATGTTAAA CATATATTGGATCTTGCAGAGTGTGGTGTATCTGATGTTTGTTTGGATGACGAGTCACCA CGTCAAACACTTATACGTGACGTGTATTTATTCTTAGATCAAAATGGTTACATAAATGCC GGAATCGCCTCAGATAAGGTGAAAACAGACCATGAAAGTCCTCCTGAAGATGTAGAAGTA TCCAAGCTAAATGAATCACATGAAAGGAAATCTGTCAGTATTCAAGATTGCATTGTCACT GAAGCAGTCCAGGATAAGAAAGCTGTTGTTAAACAGACTGATTGCGTTTTGACAGAAGCA TCAAATGAAGAGAGTAGCTCTGCTGCCATTCACTGTGATGCTCAAGACTTGCTGCCTCCC TTGAAGTCCGAAGAGCTGATATTCAAGGAAAAGAATCAGGGTGTATTAACTGAAGGTAGA GATGAATCAGCACTTCCCAGCAATTCCGATATCCACTCTAAGTCTGACCTTGATGGTTTC ATTTTAAAAGTTGAAGGTGGCAGTCTTCATCAAGCAGAAGCAGCTGATATAGAACATTCT GAAAACAAACATGAAGCAAGTGATAGAGTTGAATCTGGTGGGTATGGAAAAAAGATAATA GTTGTTGGGGCTGGTCCAGCTGGCTTAACTGCTGCACGACATTTGCAGCGCCAAGGTTTT TCTGTCACTGTTCTTGAGGCACGTAATAGGATTGGCGGTCGTGTTTATACAGATCGTGTG TCTCTTTCAGTTCCTGTGGATTTGGGTGCTAGCATTATTACAGGTGTGGAGGCTGATATA GCAACAGAAAGAAGGGCTGATCCATCATCTTTGATATGTTCTCAGCTTGGTCTTGAACTG ACTGTGTTGAACAGTGCTTGCCCTCTCTATGATGTAGTAACTGGCGACAAAGTTCCTGAT GATTTGGATACAGATTTGGAATCTGAATACAATGGTCTTCTTGATGAGATGGCACAGCTT TTTGCACAAAATGGTGAAAGTGCAGTGGGTTTATCCCTTGAGGACGGATTAGAGTATGCA CTTAGGAAGAATCGTGTGACTCGATCTGAACAGGATGATCAGTTAAGAAATGTATCTAGT GCTGGAGCTGTAGACATTTCTGAAAGTGCTTCCACAGAAAAGGAGATAGCCCACTGTGGA AAGGAGGATAAGACAGATGTTCTCAGCCCCCTTGAAAGAAGAGTTATGAACTGGCACTTT GCACATTTGGAATATGGTTGTGCTGCAATGCTCAAATCCGTTTCTCTTCCATATTGGAAC CAGGATGATGTGTATGGAGGGTTTGGAGGAGCTCATTGCATGATTAAAGGTGGCTACGAC ACAGTTCTAGAGAGCCTTGCAAAAGGACTTGATGTTCAGTTAAATCATGTTGTAACTGAA GTACTTTATGGATCTGAGGAACTAGGTGCCAGTGGTAATAGCAGGAAATTTGTCAAAATT TCCACTTCAAATGGAAATGAATTTGTGGGAGATGCTGTGCTGATCACTGTTCCTCTTGGT TGCTTGAAAGCACAGACAATTAAATTTTCTCCTTCGTTGCCAGACTGGAAATTGTCTTCT ATTGACAGGCTTGGATTTGGTCTTCTCAATAAAATTGTCTTGGAGTTTCCTGAGGTCTTT TGGGATGATAATGTGGATTATTTTGGTGCAACTGCTGAACAAACTGATTTAAGAGGACAA TGCTTTATGTTTTGGAATCTCAAAAAGACAGTTGGGGTACCAGTTCTGATAGCACTACTT GTTGGGAAGGCTGCTATAGATGGACAGAGTATCAGTTCTGATGATCATGTTAAGAATGCT ATAGTGGTTCTCCGTAAGCTCTTTAAGGATGCTTCTGTACCAGATCCAGTTGCATCTGTT GTGACAAACTGGGGACTTGATCCTTTTAGCAGAGGAGCTTACTCTTATGTTGCAGTAGGA GCATCGGGAAGGGACTACGACATTCTAGGAAGGCCTGTTTCAGACTGTTTATTTTTTGCT GGTGAAGCAACATGTAAAGAACACCCAGATACTGTTGGTGGTGCAATTTTAAGTGGTCTT CGAGAAGCTGTTCGGATCATTGACTTGGTACACAGTGGTAAGGATTATGTGGCTGAGGTT GAAGCTCTACAAACTTACCAAATGCAGTCAGATAGTGAAAGAAATGAAGTTAAAGACATG TCAAATAAACTTGATGCATGTGAACTTTCAACTGCTCTGTGCAAAACCTCATCTGATGCA TCCTATCCACTATTTAGCAAGGAGACTTTACTGCAAGAAATGTTCTTTAGTGCAAAAACA ACATCAGGGCGTCTACATTTGGCT

Peptide Sequence

PEP ID	Os10t0532100-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:20681520:20685553:1 gene:Os10g0532100 transcript:Os10t0532100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein HDMA704, histone lysine-specific demethylase 704, polyamine oxidase 11 description:Similar to Amine oxidase, flavin-containing. (Os10t0532100-01)
Sequence	IGGELKDSGGLGLEDSLSTLFKRSGRKSRQVSVKEEEGVEVAGSHGEEILEKGSGLVSDR VAKGTKRRRRRTKEEMKNAAAKSESAMAHEGSPNRKVGTSLPRKAKAEAKVKISNSNRRS KKSDEKPKASDDVLCHRSLGETIEQDAETRTVLDDGSRNSSDGASHRIEVSACLSNQPCL KPCSGELAEEVSLSAANAATDGVSNEHTYSETLLKERNDDAGCSHGKPPTLAIKSIPGKK PIEMPKKPVRQKDQLLSTDVDNKCVVGSGDTKDVNIENQPAFGIPESHVTGKGLHPHKMA TSVKELDVVDVVAPTDFEDMENASKSKRVTRSSRKRKHGDMAYEGDIDWETLMQEQGLFS NLSAALVDYPLKSKDKIKISEVLDNGDGSGVAAVRAGLKAKAVTPIEKIKFKDILKRRGG LQEYLECRNMILSRWCKDVKHILDLAECGVSDVCLDDESPRQTLIRDVYLFLDQNGYINA GIASDKVKTDHESPPEDVEVSKLNESHERKSVSIQDCIVTEAVQDKKAVVKQTDCVLTEA SNEESSSAAIHCDAQDLLPPLKSEELIFKEKNQGVLTEGRDESALPSNSDIHSKSDLDGF ILKVEGGSLHQAEAADIEHSENKHEASDRVESGGYGKKIIVVGAGPAGLTAARHLQRQGF SVTVLEARNRIGGRVYTDRVSLSVPVDLGASIITGVEADIATERRADPSSLICSQLGLEL TVLNSACPLYDVVTGDKVPDDLDTDLESEYNGLLDEMAQLFAQNGESAVGLSLEDGLEYA LRKNRVTRSEQDDQLRNVSSAGAVDISESASTEKEIAHCGKEDKTDVLSPLERRVMNWHF AHLEYGCAAMLKSVSLPYWNQDDVYGGFGGAHCMIKGGYDTVLESLAKGLDVQLNHVVTE VLYGSEELGASGNSRKFVKISTSNGNEFVGDAVLITVPLGCLKAQTIKFSPSLPDWKLSS IDRLGFGLLNKIVLEFPEVFWDDNVDYFGATAEQTDLRGQCFMFWNLKKTVGVPVLIALL VGKAAIDGQSISSDDHVKNAIVVLRKLFKDASVPDPVASVVTNWGLDPFSRGAYSYVAVG ASGRDYDILGRPVSDCLFFAGEATCKEHPDTVGGAILSGLREAVRIIDLVHSGKDYVAEV EALQTYQMQSDSERNEVKDMSNKLDACELSTALCKTSSDASYPLFSKETLLQEMFFSAKT TSGRLHLA

Transcript Sequence

Transcript ID	Os10t0532100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20681520:20685553:1 gene:Os10g0532100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWIRM domain-containing protein HDMA704, histone lysine-specific demethylase 704, polyamine oxidase 11 description:Similar to Amine oxidase, flavin-containing. (Os10t0532100-01)
Sequence	ATTGGGGGTGAGTTGAAGGATTCAGGTGGTCTAGGGTTGGAGGACTCCTTGTCGACGCTG TTTAAGAGATCTGGTCGAAAGTCTCGACAGGTCTCTGTGAAGGAGGAAGAAGGTGTGGAA GTTGCTGGTTCACATGGTGAGGAAATTCTTGAGAAGGGATCTGGTTTGGTTTCGGATAGG GTTGCCAAGGGCACTAAACGGAGAAGGCGACGCACAAAGGAAGAAATGAAAAATGCTGCT GCAAAATCTGAAAGTGCAATGGCCCATGAAGGATCGCCCAATCGGAAAGTTGGCACCTCC TTGCCTAGAAAGGCAAAGGCAGAGGCAAAGGTGAAGATTAGTAATTCCAATAGGCGCTCA AAGAAGTCTGATGAGAAACCGAAGGCTTCAGATGATGTGTTATGTCACCGATCATTGGGA GAAACAATTGAACAAGACGCGGAGACCAGGACAGTACTGGATGATGGATCTAGAAACTCA TCTGATGGGGCCAGTCATCGCATTGAAGTTTCAGCTTGTTTAAGCAATCAGCCTTGCTTG AAACCTTGCTCAGGAGAGCTTGCTGAAGAAGTGTCTCTTAGTGCAGCAAATGCAGCCACT GATGGTGTTTCTAATGAACACACATATTCCGAAACATTATTGAAGGAAAGAAATGATGAT GCAGGTTGTTCCCATGGCAAGCCACCGACATTAGCCATAAAAAGCATACCTGGTAAAAAA CCAATAGAGATGCCCAAGAAACCTGTCCGACAAAAGGATCAGTTATTATCTACTGATGTT GACAATAAATGCGTGGTGGGCTCAGGTGACACTAAAGATGTCAATATCGAAAATCAGCCA GCTTTTGGGATCCCTGAGTCCCATGTGACTGGGAAGGGCTTGCATCCTCATAAAATGGCA ACATCTGTGAAAGAGCTGGATGTAGTTGACGTGGTAGCACCCACAGATTTCGAGGACATG GAGAATGCATCAAAATCAAAGCGTGTGACACGTAGCTCCAGAAAACGCAAGCATGGTGAC ATGGCATATGAGGGTGATATTGACTGGGAAACTCTAATGCAGGAGCAGGGGCTGTTCTCA AACCTCTCAGCAGCCTTAGTAGATTATCCTCTCAAATCAAAAGACAAAATCAAAATCTCG GAAGTTCTCGACAATGGAGATGGTAGCGGTGTTGCTGCAGTGCGTGCTGGCCTAAAGGCA AAGGCTGTTACTCCAATTGAAAAGATAAAATTCAAGGACATATTGAAGCGCAGGGGTGGC CTTCAGGAATACCTGGAATGCAGGAACATGATTCTAAGTCGATGGTGCAAGGATGTTAAA CATATATTGGATCTTGCAGAGTGTGGTGTATCTGATGTTTGTTTGGATGACGAGTCACCA CGTCAAACACTTATACGTGACGTGTATTTATTCTTAGATCAAAATGGTTACATAAATGCC GGAATCGCCTCAGATAAGGTGAAAACAGACCATGAAAGTCCTCCTGAAGATGTAGAAGTA TCCAAGCTAAATGAATCACATGAAAGGAAATCTGTCAGTATTCAAGATTGCATTGTCACT GAAGCAGTCCAGGATAAGAAAGCTGTTGTTAAACAGACTGATTGCGTTTTGACAGAAGCA TCAAATGAAGAGAGTAGCTCTGCTGCCATTCACTGTGATGCTCAAGACTTGCTGCCTCCC TTGAAGTCCGAAGAGCTGATATTCAAGGAAAAGAATCAGGGTGTATTAACTGAAGGTAGA GATGAATCAGCACTTCCCAGCAATTCCGATATCCACTCTAAGTCTGACCTTGATGGTTTC ATTTTAAAAGTTGAAGGTGGCAGTCTTCATCAAGCAGAAGCAGCTGATATAGAACATTCT GAAAACAAACATGAAGCAAGTGATAGAGTTGAATCTGGTGGGTATGGAAAAAAGATAATA GTTGTTGGGGCTGGTCCAGCTGGCTTAACTGCTGCACGACATTTGCAGCGCCAAGGTTTT TCTGTCACTGTTCTTGAGGCACGTAATAGGATTGGCGGTCGTGTTTATACAGATCGTGTG TCTCTTTCAGTTCCTGTGGATTTGGGTGCTAGCATTATTACAGGTGTGGAGGCTGATATA GCAACAGAAAGAAGGGCTGATCCATCATCTTTGATATGTTCTCAGCTTGGTCTTGAACTG ACTGTGTTGAACAGTGCTTGCCCTCTCTATGATGTAGTAACTGGCGACAAAGTTCCTGAT GATTTGGATACAGATTTGGAATCTGAATACAATGGTCTTCTTGATGAGATGGCACAGCTT TTTGCACAAAATGGTGAAAGTGCAGTGGGTTTATCCCTTGAGGACGGATTAGAGTATGCA CTTAGGAAGAATCGTGTGACTCGATCTGAACAGGATGATCAGTTAAGAAATGTATCTAGT GCTGGAGCTGTAGACATTTCTGAAAGTGCTTCCACAGAAAAGGAGATAGCCCACTGTGGA AAGGAGGATAAGACAGATGTTCTCAGCCCCCTTGAAAGAAGAGTTATGAACTGGCACTTT GCACATTTGGAATATGGTTGTGCTGCAATGCTCAAATCCGTTTCTCTTCCATATTGGAAC CAGGATGATGTGTATGGAGGGTTTGGAGGAGCTCATTGCATGATTAAAGGTGGCTACGAC ACAGTTCTAGAGAGCCTTGCAAAAGGACTTGATGTTCAGTTAAATCATGTTGTAACTGAA GTACTTTATGGATCTGAGGAACTAGGTGCCAGTGGTAATAGCAGGAAATTTGTCAAAATT TCCACTTCAAATGGAAATGAATTTGTGGGAGATGCTGTGCTGATCACTGTTCCTCTTGGT TGCTTGAAAGCACAGACAATTAAATTTTCTCCTTCGTTGCCAGACTGGAAATTGTCTTCT ATTGACAGGCTTGGATTTGGTCTTCTCAATAAAATTGTCTTGGAGTTTCCTGAGGTCTTT TGGGATGATAATGTGGATTATTTTGGTGCAACTGCTGAACAAACTGATTTAAGAGGACAA TGCTTTATGTTTTGGAATCTCAAAAAGACAGTTGGGGTACCAGTTCTGATAGCACTACTT GTTGGGAAGGCTGCTATAGATGGACAGAGTATCAGTTCTGATGATCATGTTAAGAATGCT ATAGTGGTTCTCCGTAAGCTCTTTAAGGATGCTTCTGTACCAGATCCAGTTGCATCTGTT GTGACAAACTGGGGACTTGATCCTTTTAGCAGAGGAGCTTACTCTTATGTTGCAGTAGGA GCATCGGGAAGGGACTACGACATTCTAGGAAGGCCTGTTTCAGACTGTTTATTTTTTGCT GGTGAAGCAACATGTAAAGAACACCCAGATACTGTTGGTGGTGCAATTTTAAGTGGTCTT CGAGAAGCTGTTCGGATCATTGACTTGGTACACAGTGGTAAGGATTATGTGGCTGAGGTT GAAGCTCTACAAACTTACCAAATGCAGTCAGATAGTGAAAGAAATGAAGTTAAAGACATG TCAAATAAACTTGATGCATGTGAACTTTCAACTGCTCTGTGCAAAACCTCATCTGATGCA TCCTATCCACTATTTAGCAAGGAGACTTTACTGCAAGAAATGTTCTTTAGTGCAAAAACA ACATCAGGGCGTCTACATTTGGCT