Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0527900-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:20537710:20540484:-1 gene:Os10g0527900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os10t0527900-01)
Sequence	ATGAAGGAACCGACTGCGCACATGGCTCCCGTCGTCCACCGTTTCTTCCTCGTCGACGTC GTCGTCCTCTTCGCCGCGGCCGCGGCCGCTGCCATCCCTGCGTCGGCCGAAGCGGCAGCG TCGTCGTCGCAGACCGACGCGCTGCTGGCGTGGAAGGCCAGCCTGGACGACGCGGCCTCG CTGTCCGACTGGACGCGGGCCGCGCCGGTCTGCACCTGGCGCGGCGTGGCCTGCGACGCC GCCGGCAGCGTTGCCTCGCTCCGGCTCCGGAGCCTCCGCCTCCGCGGCGGCATCCACGCG CTCGACTTCGCGGCGCTCCCGGCGCTCACTGAGCTCGACCTCAACGACAACTACCTCGTC GGCGCGATCCCGGCCAGAATCTCGCGGCTGCGCTCACTCGCCTCGCTCGACCTCGGCAGC AACTGGTTCGACGGCTCCATCCCGCCGCAGTTCGGCGACCTCTCCGGCCTCGTCGACCTC CGCCTCTACAACAACAACCTCGTCGGCGCCATCCCGCACCAGCTCAGCCGGCTCCCCAAG ATCGCCCATGTCGACCTGGGAGCAAACTACCTGACCGGGCTCGACTTCCGCAAGTTCTCG CCGATGCCCACCATGACGTTCCTGTCTCTTTTCCTCAACTCCCTCAACGGCAGCTTCCCG GAGTTCGTCATCCGCAGCGGCAACCTCACTTTCCTCGACCTGTCGCACAACAATTTCTCT GGGTCCATACCAGACATGCTGCCGGAAAAGCTCCCGAATCTGATGTACCTCAACTTGTCC TTCAACGCGTTCTCCGGTCAAATTCCGGCGTCGATCGGGAGGTTGACGAAGCTCCTGGAC CTTCGGATTGACAGCAACAACCTCACCGGTGGCGTCCCGGTGTTCCTGGGGTCGATGTCG CAGTTGAAGGTTCTTGATCTCGGATTCAACCCGCTGGGCGGTACTATCCCACCTGTTCTT GGCCAGCTCCAGATGCTGCAGCAGCTCAGCATCATGAACGCCGAGCTCGTTTCAACTCTG CCGCCTGAGCTGGGAAATCTTAAGAATCTCACTGTCATGGAGCTGTCCATGAACCAGCTC TCCGGTGGATTGCCGCCGGAGTTCGCCGGGATGCAAGCAATGCGGGTGTTCAGCATTTCA ACGAACAACCTCACCGGTGAGATCCCACCGGCGTTGTTCACGAGCTGGCCCGAGCTCATA TCCTTCCAAGTGCAGAACAACTTGTTCACCGGCAAGATTCCGCCGGAGCTGGGAAAGGCA GGGAAACTGATAGTGTTGTTCATGTTTGGAAATAGATTATCAGGCAGCATACCCGCAGCA TTAGGGAGTTTGACAAGCTTGGAGGATCTTGATTTGTCAGATAATGATCTGACAGGAGGA CCGATTCCGGGAAATATGGGAAACAATTTCAAGATGCAGGGAGTTGATCATTCGTCAGGG AATTCCTCTAACAGCAGATCTGGTTCGGATTTCTGTCAACTGCTCTCCCTAAAGATCCTG TACCTGTCAAACAACAAGCTCACTGGTAAGCTGCCCGACTGCTGGTGGAACCTGCAAAAT CTGCAGTTCATCGACTTGTCCAACAATGCATTCTCAGGTGAAATCCCTACAGTCCAGACG AACTACAACTGTTCTCTTGAATCGGTTCATCTTGCCGACAACGGCTTCACCGGTGTTTTT CCATCATCGTTAGAGATGTGTAAGGCGCTGATCACCCTAGATATTGGGAACAACAGATTC TTTGGAGGTATTCCTCCTTGGATTGGGAAAGGCCTTCTGTCGTTGAAGTTTCTTAGCCTG AAATCAAACAACTTCACAGGTGAAATCCCTTCAGAGTTGTCGAATCTCTCTCAACTTCAA CTGTTAGACATAAGCAACAACGGTTTGACAGGATTGATTCCCAAATCTTTTGGCAACCTA ACTTCCATGAAGAATCCAAATACTTTATCTGCTCAAGAAACATTAGAATGGTCTTCTTAC ATAAATTGGCTGCTTTACTCGGATGGAATCGATACAATCTGGAAGGGGCAAGAGCAATTT TTCGAAAAAACAATTGAATTACTAACGGGTATCAATTTGTCAGGTAACTCATTGTCGCAG TGTATCCCTGATGAGTTAACAACCCTCCAAGGCCTTCTATTTCTGAACTTGTCAAGAAAC CATCTGTCATGCGGCATACCTAAAAACATTGGTAATACGAAAAATCTAGAGTTCCTTGAC CTCTCATTGAACTAA

Peptide Sequence

PEP ID	Os10t0527900-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:20537710:20540484:-1 gene:Os10g0527900 transcript:Os10t0527900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os10t0527900-01)
Sequence	MKEPTAHMAPVVHRFFLVDVVVLFAAAAAAAIPASAEAAASSSQTDALLAWKASLDDAAS LSDWTRAAPVCTWRGVACDAAGSVASLRLRSLRLRGGIHALDFAALPALTELDLNDNYLV GAIPARISRLRSLASLDLGSNWFDGSIPPQFGDLSGLVDLRLYNNNLVGAIPHQLSRLPK IAHVDLGANYLTGLDFRKFSPMPTMTFLSLFLNSLNGSFPEFVIRSGNLTFLDLSHNNFS GSIPDMLPEKLPNLMYLNLSFNAFSGQIPASIGRLTKLLDLRIDSNNLTGGVPVFLGSMS QLKVLDLGFNPLGGTIPPVLGQLQMLQQLSIMNAELVSTLPPELGNLKNLTVMELSMNQL SGGLPPEFAGMQAMRVFSISTNNLTGEIPPALFTSWPELISFQVQNNLFTGKIPPELGKA GKLIVLFMFGNRLSGSIPAALGSLTSLEDLDLSDNDLTGGPIPGNMGNNFKMQGVDHSSG NSSNSRSGSDFCQLLSLKILYLSNNKLTGKLPDCWWNLQNLQFIDLSNNAFSGEIPTVQT NYNCSLESVHLADNGFTGVFPSSLEMCKALITLDIGNNRFFGGIPPWIGKGLLSLKFLSL KSNNFTGEIPSELSNLSQLQLLDISNNGLTGLIPKSFGNLTSMKNPNTLSAQETLEWSSY INWLLYSDGIDTIWKGQEQFFEKTIELLTGINLSGNSLSQCIPDELTTLQGLLFLNLSRN HLSCGIPKNIGNTKNLEFLDLSLN

Transcript Sequence

Transcript ID	Os10t0527900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20537710:20540484:-1 gene:Os10g0527900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Leucine-rich repeat, N-terminal domain containing protein. (Os10t0527900-01)
Sequence	ATGAAGGAACCGACTGCGCACATGGCTCCCGTCGTCCACCGTTTCTTCCTCGTCGACGTC GTCGTCCTCTTCGCCGCGGCCGCGGCCGCTGCCATCCCTGCGTCGGCCGAAGCGGCAGCG TCGTCGTCGCAGACCGACGCGCTGCTGGCGTGGAAGGCCAGCCTGGACGACGCGGCCTCG CTGTCCGACTGGACGCGGGCCGCGCCGGTCTGCACCTGGCGCGGCGTGGCCTGCGACGCC GCCGGCAGCGTTGCCTCGCTCCGGCTCCGGAGCCTCCGCCTCCGCGGCGGCATCCACGCG CTCGACTTCGCGGCGCTCCCGGCGCTCACTGAGCTCGACCTCAACGACAACTACCTCGTC GGCGCGATCCCGGCCAGAATCTCGCGGCTGCGCTCACTCGCCTCGCTCGACCTCGGCAGC AACTGGTTCGACGGCTCCATCCCGCCGCAGTTCGGCGACCTCTCCGGCCTCGTCGACCTC CGCCTCTACAACAACAACCTCGTCGGCGCCATCCCGCACCAGCTCAGCCGGCTCCCCAAG ATCGCCCATGTCGACCTGGGAGCAAACTACCTGACCGGGCTCGACTTCCGCAAGTTCTCG CCGATGCCCACCATGACGTTCCTGTCTCTTTTCCTCAACTCCCTCAACGGCAGCTTCCCG GAGTTCGTCATCCGCAGCGGCAACCTCACTTTCCTCGACCTGTCGCACAACAATTTCTCT GGGTCCATACCAGACATGCTGCCGGAAAAGCTCCCGAATCTGATGTACCTCAACTTGTCC TTCAACGCGTTCTCCGGTCAAATTCCGGCGTCGATCGGGAGGTTGACGAAGCTCCTGGAC CTTCGGATTGACAGCAACAACCTCACCGGTGGCGTCCCGGTGTTCCTGGGGTCGATGTCG CAGTTGAAGGTTCTTGATCTCGGATTCAACCCGCTGGGCGGTACTATCCCACCTGTTCTT GGCCAGCTCCAGATGCTGCAGCAGCTCAGCATCATGAACGCCGAGCTCGTTTCAACTCTG CCGCCTGAGCTGGGAAATCTTAAGAATCTCACTGTCATGGAGCTGTCCATGAACCAGCTC TCCGGTGGATTGCCGCCGGAGTTCGCCGGGATGCAAGCAATGCGGGTGTTCAGCATTTCA ACGAACAACCTCACCGGTGAGATCCCACCGGCGTTGTTCACGAGCTGGCCCGAGCTCATA TCCTTCCAAGTGCAGAACAACTTGTTCACCGGCAAGATTCCGCCGGAGCTGGGAAAGGCA GGGAAACTGATAGTGTTGTTCATGTTTGGAAATAGATTATCAGGCAGCATACCCGCAGCA TTAGGGAGTTTGACAAGCTTGGAGGATCTTGATTTGTCAGATAATGATCTGACAGGAGGA CCGATTCCGGGAAATATGGGAAACAATTTCAAGATGCAGGGAGTTGATCATTCGTCAGGG AATTCCTCTAACAGCAGATCTGGTTCGGATTTCTGTCAACTGCTCTCCCTAAAGATCCTG TACCTGTCAAACAACAAGCTCACTGGTAAGCTGCCCGACTGCTGGTGGAACCTGCAAAAT CTGCAGTTCATCGACTTGTCCAACAATGCATTCTCAGGTGAAATCCCTACAGTCCAGACG AACTACAACTGTTCTCTTGAATCGGTTCATCTTGCCGACAACGGCTTCACCGGTGTTTTT CCATCATCGTTAGAGATGTGTAAGGCGCTGATCACCCTAGATATTGGGAACAACAGATTC TTTGGAGGTATTCCTCCTTGGATTGGGAAAGGCCTTCTGTCGTTGAAGTTTCTTAGCCTG AAATCAAACAACTTCACAGGTGAAATCCCTTCAGAGTTGTCGAATCTCTCTCAACTTCAA CTGTTAGACATAAGCAACAACGGTTTGACAGGATTGATTCCCAAATCTTTTGGCAACCTA ACTTCCATGAAGAATCCAAATACTTTATCTGCTCAAGAAACATTAGAATGGTCTTCTTAC ATAAATTGGCTGCTTTACTCGGATGGAATCGATACAATCTGGAAGGGGCAAGAGCAATTT TTCGAAAAAACAATTGAATTACTAACGGGTATCAATTTGTCAGGTAACTCATTGTCGCAG TGTATCCCTGATGAGTTAACAACCCTCCAAGGCCTTCTATTTCTGAACTTGTCAAGAAAC CATCTGTCATGCGGCATACCTAAAAACATTGGTAATACGAAAAATCTAGAGTTCCTTGAC CTCTCATTGAACTAACTTTCAGGAGCCATTCCTCCAAGCCTTGCTGATATATCTACTCTT GACATTCTAAATCTCTCGAATAATCATCTATCAGGTAAGATACCCACTGGGAATCAACTT CAAACCCTCAGTGACCCATCAATATACCACAACAATTATGGTCTATGTGGCTTTCCATTG AACATTTCATGCACAAGTTCTTCACTTGCATCGGATGAGAGATTTTGTAGAAAATGCGAG GACCAGTATCTATCCTTCTGTGTAATGGCTGGAGTGGTTTTCGGGTTTTGGGTATGGTTT GGAATGTTCTTTTTCAGTGGAACCTTAAGGTATGCTGTTTTCGGCTTTGTTGATTGCATA CAGTGTAAGGTTATGCAGAAGGTGTACTGTATTAATCAATTTCTTTCAAGAGGAACTACT GCTTAGTATCTGTAAGCTGTGGTTTCTTAATGTACCTTCTTATGATGAACTATATTTAGT TTTTCC