Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0524400-03
CDS Infomation	cds chromosome:IRGSP-1.0:10:20379931:20386013:-1 gene:Os10g0524400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D beta 1 description:Similar to Phospholipase D beta 2. (Os10t0524400-01);Similar to Phospholipase D. (Os10t0524400-02);Similar to Phospholipase D beta 2. (Os10t0524400-03);Phospholipase D domain containing protein. (Os10t0524400-04)
Sequence	ATGGAGGGCGGAAACCACGGTGGGGGAGGGTACCCCTACCCGCCGCCGCAGCAGTATCCT TACCCGTACGGGCAGTACCCATACCAGTATCCTCCACCGCAGCAGCAGCCGCCGCCGCCC TCCGCCTACCTCTCGCCGTCCCGTTCGTTCCACGGTTACCCCTCCGCGCCGCCGCCGCAG CCGCAGCCGCAGCCGTACGCGCACCATTCCGCCCCGCTCCAGCCTTACCCGCCGCCGCCG CAGCACCATGCCTACCCGCCGCCGCAGCCGCATCCGCCCTCGCCGTACGTCTACGACCCT TACCACGCGCCCGCCGCGGCGTACCCTTCCTACCCGAGCCCCAACCCCAGCCCGTCCATC TCCCCGAGCTCCAGCTTCCACCACCACCCTGAACCGCCATCGCCATCGCCCTCCGCGCCG TCGTACCCCTCCATTGCGGATGGGCTCGCCAACATGCACGTCTCCGACCGCCACGACTAC CCGCCGCCGCCGTCGCCGGCGGCCGTGCCCGCGGCGTCGTCCCCCTCCGTGCTCCCGCCT TCCGCGTCGTTCCCCGGCGGCGGGAGCAGCCACGGCGGTGGCGGGATGCAGATGGTGCCG TACGGCCCTCCTGCCGGAGGGTCGCAGCACGGTGGGATGCAGATGGTGGCGTACGGCTCG CCGGCCGGAGGGTCGCAGCACGGCAGCGTGAGGCCATCCCTGAAGGTGGTGCTGCTCCAC GGCACCCTCGACGTCTGGGTGTACGACGCTCGGAACCTCCCGAACAAGGATCTCTTCTCC AAGAGGGTCGGCGACCTCCTCGGTCCGCGCCTCATCGGCGCCGTCGGCAGCAAAATGTCC AGCGCCAACATGACCAGCGACCCCTATGTTACCATCCAGGTCTCCTATGCCACCGTCGCG CGCACCTACGTCGTTCCCAACAATGAGAACCCCGTTTGGACGCAGAATTTCCTTGTCCCT GTTGGGCATGATGCCGCCGAGGTCGAGTTCGTTGTCAAGGACAATGATGTCTTCGGTGCT CAGCTCATAGGCACAGTGTCGATTCCTGCTGAGAAGCTCCTTTTTGGAGAAAGGATTAAC GGCATCTACGATGTGCTTGAGTCCAATGGGAAGCCATGCGCTCAAGGTGCTGTGTTGCGG CTGTCCATACAGTACATCCCGGTGGCTCAGCTCAAAATGTATCACCATGGTGTCATTGCC GGCCCAGATAGCCTGGGAGTTCCTAATACTTACTTCCCGATGCGGCGTGGCAATAGAGTG ACACTGTATCAGGACGCACATGTGCCTGATGGTTGTCTCCCGGATTTCTGTCTTGATCAC GGAATGCGCTATCAGCACGGGCAGTGTTGGCGTGATATCTACGATGCTATATGCCAAGCA CGGCGGTTGATTTACATTGTGGGATGGTCAGTGTTCCACACAATCCACCTCATCAGGGAA GGAGTTGAGAAGATGCCATCACTTGGGGAACTGTTGAAGATGAAGTCACAGGAAGGGGTG AGGGTGTTGCTTCTTGTGTGGGACGATCCAACATCAAGGAGTATTCTTGGAATTAAGACG GATGGTTTCATGGGCACACGAGATGAGGAGACCCGCAGATTTTTCAAGCACTCTTCAGTT CAAGTATTGCTTTGCCCACGATCTGCTGGGAAACGGCACAGCTGGGTGAAACAGCAGGAA ACAGGAACCATTTTTACTCATCATCAGAAAACAGTTATTTTGGATGCTGATGCTGGCAAT CATAAGAGGAAAATAATTGCTTTTGTTGGTGGCCTCGATTTATGCGGTGGGCGATATGAT ACACCTAGCCATCCTCTATTTAGGTCTCTTCAGACTGTGCACAAGGAGGATTATTACAAT CCAAATTTTGCTACAGTTGATGCTCGTGGCCCAAGGGAACCATGGCACGACTTGCATTCC AAGATTGATGGTCCAGCGGCATATGATGTTTTGCAAAATTTTCAGGAGCGTTGGTTAAAG GCATCCAAACGCCATGGGATTAAAAAGTTAGGAAAATCATATGATGATGCCCTCCTCAGT ATTGAAAGAATACCTGATTTTATAAGCATTAATGACGCAATATATTTTAGTGACAATGAT CCAGAGACGTGGCATGTTCAGGTGTTTCGTTCTATTGATTCAAATTCTGCCAAAGGATTT CCAAAGGATCCACGGGAAGCAACCCGCAAGAATCTTGTTTGTGGGAAGAATGTACTGATT GATATGAGCATACATACTGCATATGTCAATGCTATTCGTGGAGCGCAGCACTTCATTTAT ATTGAGAACCAGTATTTCATTGGATCTTCGTTTAATTGGGATTCAAACAAAGATATTGGG GCTAATAATTTAATACCAATCGAAATTGCTCTCAAAATTGCAAACAAGATAAAGGCAAAA GAGAGATTCTCTGCATATATAGTAATTCCCATGTGGCCTGAGGGTAATCCAACAGGTGCT CCTACACAAAGAATTCTTTACTGGCAGCACAAGACAATGCAAATGATGTACGAAACAATA TATAGGGCCCTGAAAGAAGAGGGTCTAGATGATCTATATGAGCCTCAGGATTATCTGAAC TTCTTTTGTCTTGGCAATCGTGAAGTTGCTGACAGTCCAAGCACTTCAAACTCAACAAGC ACTCCTCAGGAACAAGCTAGGAAACATAGAAGATTCATGGTATATGTACATTCAAAAGGC ATGATTGTGGATGATGAATATGTGATAATTGGATCAGCTAATATCAATCAGAGGTCCATG GAAGGTATCAGAGATACTGAGATTGCGATGGGTGCGTATCAGCCACAGTATACATGGGCA AGTAAGGTTTCTGCACCCCGTGGACAGATTTATGGGTACAGAATGTCTCTTTGGGCGGAG CATATTGGAGTGGTTGAGGAAGGCTTCAACTATCCAGAGACCATGGAATGCATGAGACGA GTTCGCCAAATCGGTGAACAGAACTGGGAACGATTTGTTGATAATGAGGTGACTGAGATG AGAGGCCACCTAATGAAGTACCCTGTAAGTGTTGACCGTAAGGGCAAGGTGAAACCCTTG CCAGGATGTACGTCATTCCCAGACATGGGTGGTAACATCTGTGGATCATTCCGAGCCATC CAAGAAAACCTCACAATATGA

Peptide Sequence

PEP ID	Os10t0524400-03
PEP Infomation	pep chromosome:IRGSP-1.0:10:20379931:20386013:-1 gene:Os10g0524400 transcript:Os10t0524400-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D beta 1 description:Similar to Phospholipase D beta 2. (Os10t0524400-01);Similar to Phospholipase D. (Os10t0524400-02);Similar to Phospholipase D beta 2. (Os10t0524400-03);Phospholipase D domain containing protein. (Os10t0524400-04)
Sequence	MEGGNHGGGGYPYPPPQQYPYPYGQYPYQYPPPQQQPPPPSAYLSPSRSFHGYPSAPPPQ PQPQPYAHHSAPLQPYPPPPQHHAYPPPQPHPPSPYVYDPYHAPAAAYPSYPSPNPSPSI SPSSSFHHHPEPPSPSPSAPSYPSIADGLANMHVSDRHDYPPPPSPAAVPAASSPSVLPP SASFPGGGSSHGGGGMQMVPYGPPAGGSQHGGMQMVAYGSPAGGSQHGSVRPSLKVVLLH GTLDVWVYDARNLPNKDLFSKRVGDLLGPRLIGAVGSKMSSANMTSDPYVTIQVSYATVA RTYVVPNNENPVWTQNFLVPVGHDAAEVEFVVKDNDVFGAQLIGTVSIPAEKLLFGERIN GIYDVLESNGKPCAQGAVLRLSIQYIPVAQLKMYHHGVIAGPDSLGVPNTYFPMRRGNRV TLYQDAHVPDGCLPDFCLDHGMRYQHGQCWRDIYDAICQARRLIYIVGWSVFHTIHLIRE GVEKMPSLGELLKMKSQEGVRVLLLVWDDPTSRSILGIKTDGFMGTRDEETRRFFKHSSV QVLLCPRSAGKRHSWVKQQETGTIFTHHQKTVILDADAGNHKRKIIAFVGGLDLCGGRYD TPSHPLFRSLQTVHKEDYYNPNFATVDARGPREPWHDLHSKIDGPAAYDVLQNFQERWLK ASKRHGIKKLGKSYDDALLSIERIPDFISINDAIYFSDNDPETWHVQVFRSIDSNSAKGF PKDPREATRKNLVCGKNVLIDMSIHTAYVNAIRGAQHFIYIENQYFIGSSFNWDSNKDIG ANNLIPIEIALKIANKIKAKERFSAYIVIPMWPEGNPTGAPTQRILYWQHKTMQMMYETI YRALKEEGLDDLYEPQDYLNFFCLGNREVADSPSTSNSTSTPQEQARKHRRFMVYVHSKG MIVDDEYVIIGSANINQRSMEGIRDTEIAMGAYQPQYTWASKVSAPRGQIYGYRMSLWAE HIGVVEEGFNYPETMECMRRVRQIGEQNWERFVDNEVTEMRGHLMKYPVSVDRKGKVKPL PGCTSFPDMGGNICGSFRAIQENLTI

Transcript Sequence

Transcript ID	Os10t0524400-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20379931:20386013:-1 gene:Os10g0524400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHOSPHOLIPASE D beta 1 description:Similar to Phospholipase D beta 2. (Os10t0524400-01);Similar to Phospholipase D. (Os10t0524400-02);Similar to Phospholipase D beta 2. (Os10t0524400-03);Phospholipase D domain containing protein. (Os10t0524400-04)
Sequence	CGACCGCGACCTCACCCACCGTTTCTCGATCGTTTCTCTCCCTCCTCCTCCCGCGATCCG GTCTTCTTCCTCCTCCCCGTCGTGCTCGCCGCCCACGACTCCTCCTCCTCCTCCACCACC ACCCCTCCACGACGCGGCGGGCGGCGAGCGCGCGCCTCGTCTCACCCTCACGCCTCCCAC GCCTTGGAACCCAATTGGAGATAGAAGAGGGGAGCGCGAGGTCAAACCAGGGGAATCGGA ATCGGAATCGGAATCCGCGACGAGACGACCCTACCCCCGCGCTCCGGCGACCGACCGGCG GCGATGGAGGGCGGAAACCACGGTGGGGGAGGGTACCCCTACCCGCCGCCGCAGCAGTAT CCTTACCCGTACGGGCAGTACCCATACCAGTATCCTCCACCGCAGCAGCAGCCGCCGCCG CCCTCCGCCTACCTCTCGCCGTCCCGTTCGTTCCACGGTTACCCCTCCGCGCCGCCGCCG CAGCCGCAGCCGCAGCCGTACGCGCACCATTCCGCCCCGCTCCAGCCTTACCCGCCGCCG CCGCAGCACCATGCCTACCCGCCGCCGCAGCCGCATCCGCCCTCGCCGTACGTCTACGAC CCTTACCACGCGCCCGCCGCGGCGTACCCTTCCTACCCGAGCCCCAACCCCAGCCCGTCC ATCTCCCCGAGCTCCAGCTTCCACCACCACCCTGAACCGCCATCGCCATCGCCCTCCGCG CCGTCGTACCCCTCCATTGCGGATGGGCTCGCCAACATGCACGTCTCCGACCGCCACGAC TACCCGCCGCCGCCGTCGCCGGCGGCCGTGCCCGCGGCGTCGTCCCCCTCCGTGCTCCCG CCTTCCGCGTCGTTCCCCGGCGGCGGGAGCAGCCACGGCGGTGGCGGGATGCAGATGGTG CCGTACGGCCCTCCTGCCGGAGGGTCGCAGCACGGTGGGATGCAGATGGTGGCGTACGGC TCGCCGGCCGGAGGGTCGCAGCACGGCAGCGTGAGGCCATCCCTGAAGGTGGTGCTGCTC CACGGCACCCTCGACGTCTGGGTGTACGACGCTCGGAACCTCCCGAACAAGGATCTCTTC TCCAAGAGGGTCGGCGACCTCCTCGGTCCGCGCCTCATCGGCGCCGTCGGCAGCAAAATG TCCAGCGCCAACATGACCAGCGACCCCTATGTTACCATCCAGGTCTCCTATGCCACCGTC GCGCGCACCTACGTCGTTCCCAACAATGAGAACCCCGTTTGGACGCAGAATTTCCTTGTC CCTGTTGGGCATGATGCCGCCGAGGTCGAGTTCGTTGTCAAGGACAATGATGTCTTCGGT GCTCAGCTCATAGGCACAGTGTCGATTCCTGCTGAGAAGCTCCTTTTTGGAGAAAGGATT AACGGCATCTACGATGTGCTTGAGTCCAATGGGAAGCCATGCGCTCAAGGTGCTGTGTTG CGGCTGTCCATACAGTACATCCCGGTGGCTCAGCTCAAAATGTATCACCATGGTGTCATT GCCGGCCCAGATAGCCTGGGAGTTCCTAATACTTACTTCCCGATGCGGCGTGGCAATAGA GTGACACTGTATCAGGACGCACATGTGCCTGATGGTTGTCTCCCGGATTTCTGTCTTGAT CACGGAATGCGCTATCAGCACGGGCAGTGTTGGCGTGATATCTACGATGCTATATGCCAA GCACGGCGGTTGATTTACATTGTGGGATGGTCAGTGTTCCACACAATCCACCTCATCAGG GAAGGAGTTGAGAAGATGCCATCACTTGGGGAACTGTTGAAGATGAAGTCACAGGAAGGG GTGAGGGTGTTGCTTCTTGTGTGGGACGATCCAACATCAAGGAGTATTCTTGGAATTAAG ACGGATGGTTTCATGGGCACACGAGATGAGGAGACCCGCAGATTTTTCAAGCACTCTTCA GTTCAAGTATTGCTTTGCCCACGATCTGCTGGGAAACGGCACAGCTGGGTGAAACAGCAG GAAACAGGAACCATTTTTACTCATCATCAGAAAACAGTTATTTTGGATGCTGATGCTGGC AATCATAAGAGGAAAATAATTGCTTTTGTTGGTGGCCTCGATTTATGCGGTGGGCGATAT GATACACCTAGCCATCCTCTATTTAGGTCTCTTCAGACTGTGCACAAGGAGGATTATTAC AATCCAAATTTTGCTACAGTTGATGCTCGTGGCCCAAGGGAACCATGGCACGACTTGCAT TCCAAGATTGATGGTCCAGCGGCATATGATGTTTTGCAAAATTTTCAGGAGCGTTGGTTA AAGGCATCCAAACGCCATGGGATTAAAAAGTTAGGAAAATCATATGATGATGCCCTCCTC AGTATTGAAAGAATACCTGATTTTATAAGCATTAATGACGCAATATATTTTAGTGACAAT GATCCAGAGACGTGGCATGTTCAGGTGTTTCGTTCTATTGATTCAAATTCTGCCAAAGGA TTTCCAAAGGATCCACGGGAAGCAACCCGCAAGAATCTTGTTTGTGGGAAGAATGTACTG ATTGATATGAGCATACATACTGCATATGTCAATGCTATTCGTGGAGCGCAGCACTTCATT TATATTGAGAACCAGTATTTCATTGGATCTTCGTTTAATTGGGATTCAAACAAAGATATT GGGGCTAATAATTTAATACCAATCGAAATTGCTCTCAAAATTGCAAACAAGATAAAGGCA AAAGAGAGATTCTCTGCATATATAGTAATTCCCATGTGGCCTGAGGGTAATCCAACAGGT GCTCCTACACAAAGAATTCTTTACTGGCAGCACAAGACAATGCAAATGATGTACGAAACA ATATATAGGGCCCTGAAAGAAGAGGGTCTAGATGATCTATATGAGCCTCAGGATTATCTG AACTTCTTTTGTCTTGGCAATCGTGAAGTTGCTGACAGTCCAAGCACTTCAAACTCAACA AGCACTCCTCAGGAACAAGCTAGGAAACATAGAAGATTCATGGTATATGTACATTCAAAA GGCATGATTGTGGATGATGAATATGTGATAATTGGATCAGCTAATATCAATCAGAGGTCC ATGGAAGGTATCAGAGATACTGAGATTGCGATGGGTGCGTATCAGCCACAGTATACATGG GCAAGTAAGGTTTCTGCACCCCGTGGACAGATTTATGGGTACAGAATGTCTCTTTGGGCG GAGCATATTGGAGTGGTTGAGGAAGGCTTCAACTATCCAGAGACCATGGAATGCATGAGA CGAGTTCGCCAAATCGGTGAACAGAACTGGGAACGATTTGTTGATAATGAGGTGACTGAG ATGAGAGGCCACCTAATGAAGTACCCTGTAAGTGTTGACCGTAAGGGCAAGGTGAAACCC TTGCCAGGATGTACGTCATTCCCAGACATGGGTGGTAACATCTGTGGATCATTCCGAGCC ATCCAAGAAAACCTCACAATATGAATTTCGATTATCTGTAAGT