Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0523700-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:20345304:20347002:-1 gene:Os10g0523700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arogenate dehydratase description:Prephenate dehydratase domain containing protein. (Os10t0523700-01)
Sequence	ATGGCCTACACCTCCTCCTCCCTCCACCTCCACAAGCACCTCCTCCTCCCCAAGACCAAC CCCTCCTCCTCCTACTCGCGGCCTCCGCCTCCGTCGTTCGTCGCCGCGGCGGCCAAGATC AACGGCGTCAACGGACACTCCTCCAAGAAGTCCCCCAACGGCAAGGCGCAGATCAACGGC GACGGCAAGAAGGGGGTCAACGGGAGCGGGAGGAAGAAGGCGGCGGCGCAGCACATCAAC GGGAATGACCGGATCCATCTGTCGGTGAGCACGGGCGGCGCCGGGGGCCAGGATGGGTTC GGGCTCAGGGTGGCGTTCCAGGGCGCGCCGGGCGCGTACAGCGAGTTCGCGGCGAAGACG GCGCTCCCCGGGTGCGACACCGTGCCCTGCCGCGCGTTCGCCGACGCGCTGGCGGCGGTC GACGGCGGCGCCGTCGACCGCGCGATACTGCCCGTCGAGTCCACCATGGAGGGCACCGCG CTGCGGAACTACGACCTCCTGCTGAGGCATGACCTCGTCGTGGTCCAGGAGATCAACCTG TTCGTGCACTACTGCCTCCTCGCCATGCCCGGTGTCCGCGCCGCCGAGGTGCGCCGGGTG ATTAGCCACCCCATGGCGCTCGCGCACTGCGGCCGTGCGCTGGCGCGGCTCGGCGTGGAC AGGGAGCCCGTGGAGGACACCGCCGGCGCCGTGGAGATGCTGCGGTCCAACCGGATGCTC GACACCGCCGCCATCGCCAGCCCGCGCGCCGCCGACCTCTACGGCCTCGACGTGCTCGCG CACGGCCTCCAGGACGAGTCATGGAACGTCACCCGCTTCCTGCTCCTCTCCAAGCCGCCC TCGCCGGTGACGCTGCCCATGGACGCCGACGCCAAGACCAGCATGGTGGTCGCCCACCGG GGCGGCTCCATGATGGTGGTCCTCAAGGTCCTCTCCGCCTTCTCCTCCCGCAACATCAAC CTGACCAAGCTGGAGGTCATCAACAACAACGACGGCGGCGGCGGCGGCGGTGGCGCCGCG GCGGGCCACCCCGTGATGATCCTCGACACGAGCGCCCGCGGCGCGCCGACGCTCCGCGCG TTCCCGCACGTCCTCTACGTCGACTGCGAGGGCGCCTCTCACGACCCGCGCGTCCTCGAC GCCATCAAGGAGATCGAGAGATTCGCGGTGTTCGTCCGCGTTCTTGGCTGCTACGCCGCC GATTCCAACGTCTACGACCTGCAATGA

Peptide Sequence

PEP ID	Os10t0523700-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:20345304:20347002:-1 gene:Os10g0523700 transcript:Os10t0523700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arogenate dehydratase description:Prephenate dehydratase domain containing protein. (Os10t0523700-01)
Sequence	MAYTSSSLHLHKHLLLPKTNPSSSYSRPPPPSFVAAAAKINGVNGHSSKKSPNGKAQING DGKKGVNGSGRKKAAAQHINGNDRIHLSVSTGGAGGQDGFGLRVAFQGAPGAYSEFAAKT ALPGCDTVPCRAFADALAAVDGGAVDRAILPVESTMEGTALRNYDLLLRHDLVVVQEINL FVHYCLLAMPGVRAAEVRRVISHPMALAHCGRALARLGVDREPVEDTAGAVEMLRSNRML DTAAIASPRAADLYGLDVLAHGLQDESWNVTRFLLLSKPPSPVTLPMDADAKTSMVVAHR GGSMMVVLKVLSAFSSRNINLTKLEVINNNDGGGGGGGAAAGHPVMILDTSARGAPTLRA FPHVLYVDCEGASHDPRVLDAIKEIERFAVFVRVLGCYAADSNVYDLQ

Transcript Sequence

Transcript ID	Os10t0523700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20345304:20347002:-1 gene:Os10g0523700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:arogenate dehydratase description:Prephenate dehydratase domain containing protein. (Os10t0523700-01)
Sequence	GCTCGTTAGCTAAAACTGTGAAAACTCTCCATTTTCCTTGCCTCTCTCTCTCCCCACCCA ATCCCAACCCACCACCTCTCCTCTCGCCGCCGCCGCCGCCGCCGCCGCGCGCCGTTCTAT GGCCTACACCTCCTCCTCCCTCCACCTCCACAAGCACCTCCTCCTCCCCAAGACCAACCC CTCCTCCTCCTACTCGCGGCCTCCGCCTCCGTCGTTCGTCGCCGCGGCGGCCAAGATCAA CGGCGTCAACGGACACTCCTCCAAGAAGTCCCCCAACGGCAAGGCGCAGATCAACGGCGA CGGCAAGAAGGGGGTCAACGGGAGCGGGAGGAAGAAGGCGGCGGCGCAGCACATCAACGG GAATGACCGGATCCATCTGTCGGTGAGCACGGGCGGCGCCGGGGGCCAGGATGGGTTCGG GCTCAGGGTGGCGTTCCAGGGCGCGCCGGGCGCGTACAGCGAGTTCGCGGCGAAGACGGC GCTCCCCGGGTGCGACACCGTGCCCTGCCGCGCGTTCGCCGACGCGCTGGCGGCGGTCGA CGGCGGCGCCGTCGACCGCGCGATACTGCCCGTCGAGTCCACCATGGAGGGCACCGCGCT GCGGAACTACGACCTCCTGCTGAGGCATGACCTCGTCGTGGTCCAGGAGATCAACCTGTT CGTGCACTACTGCCTCCTCGCCATGCCCGGTGTCCGCGCCGCCGAGGTGCGCCGGGTGAT TAGCCACCCCATGGCGCTCGCGCACTGCGGCCGTGCGCTGGCGCGGCTCGGCGTGGACAG GGAGCCCGTGGAGGACACCGCCGGCGCCGTGGAGATGCTGCGGTCCAACCGGATGCTCGA CACCGCCGCCATCGCCAGCCCGCGCGCCGCCGACCTCTACGGCCTCGACGTGCTCGCGCA CGGCCTCCAGGACGAGTCATGGAACGTCACCCGCTTCCTGCTCCTCTCCAAGCCGCCCTC GCCGGTGACGCTGCCCATGGACGCCGACGCCAAGACCAGCATGGTGGTCGCCCACCGGGG CGGCTCCATGATGGTGGTCCTCAAGGTCCTCTCCGCCTTCTCCTCCCGCAACATCAACCT GACCAAGCTGGAGGTCATCAACAACAACGACGGCGGCGGCGGCGGCGGTGGCGCCGCGGC GGGCCACCCCGTGATGATCCTCGACACGAGCGCCCGCGGCGCGCCGACGCTCCGCGCGTT CCCGCACGTCCTCTACGTCGACTGCGAGGGCGCCTCTCACGACCCGCGCGTCCTCGACGC CATCAAGGAGATCGAGAGATTCGCGGTGTTCGTCCGCGTTCTTGGCTGCTACGCCGCCGA TTCCAACGTCTACGACCTGCAATGAGGCGGCCATCGATCGAACACACAGCTGCGGATCCA CATCAAATCAGCTAGTCTTGCAAGATTTGGATCACTGATCAGTTGGATTAGAGCTCTCCA TTCCAGCACTCACTTCAGTGAGCTACAGATGCTATACTTTGCTTGCTTGCTGCTGATGCT GCTGCTGCTGCCTGCTATGCGATTTTTGTACAGATGCAATAAGAAATCTTTACCATTTCT GCTGCTGGCTTAGGTATGTGCATAGGTTTTTAATCCTGGTATTGATGCCTTCTAGCTGAA GGAAAGTGTAAGATGGCACAGGATTGATGTAATTTTGGTGTGCTAGATCTTGATTGATAG TGAGTATTCCTTAATCCCC