Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0523100-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:20295357:20299451:1 gene:Os10g0523100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isopenicillin N synthase family protein. (Os10t0523100-01);Isopenicillin N synthase family protein. (Os10t0523100-02)
Sequence	ATGGCCGGCGGCGGCGGCGGCGGGAATCGCCTGGACCTCCCCGTGGTGGACCTCGCGTCC TCCGACCCCCGAGCCGCCGCCGAGTCCATCCGAAAGGCGTGCGTGGAGTCCGGATTCTTC TACGTGGTCAACCATGGGGTGGAGGAGGGATTGCTGAAGAGGTTGTTCGCGGAGAGCTCG AAGTTCTTCGAGCTGCCGATGGAGGAGAAGATAGCGCTGCGGAGGAACAGCAACCACCGG GGATACACCCCGCCCTACGCCGAGAAGCTCGATCCCTCGTCCAAATTCGAAGGAGACCTC AAGGAAAGTTTCTATATTGGGCCTATTGGAGATGAAGGTTTGCAGAATGATGCTAACCAG TGGCCTTCTGAAGAGCGCTTACCAAGTCGGAGGGAGACAATTAAGATGTACCATGCAAGT GCACTGTCTACTGGCAAAAGGATACTCTCTCTAATCGCTCTGAGTTTGAATCTTGACGCT GAATTCTTTGAGAACATTGGTGCCTTCAGCTGCCCATCAGCATTTCTTCGATTATTGCAC TACCCAGGTGAAGTAGACGACTCTGATGATGGCAATTATGGTGCATCAGCTCACTCTGAT TATGGAATGATAACCCTCCTAGCAACAGACGGCACTCCTGGGCTACAGATATGCAGGGAA AAGAATAGGAATCCCCAGCTCTGGGAAGATGTTCATCACATTGATGGGGCCCTGATTGTT AACATTGGCGATTTGCTAGAAAGGTGGACGAATTGTATTTACAGGTCTACAGTGCACCGT GTTGTTGCAGTTGGTAAAGAGCGATATTCTGCGGCTTTTTTTCTTGACCCAAACCCTGAT TTAGTGGTTCAGTGTTTGGAAAGCTGTTGCAGCGAGTCATGCCCACCGAGGTTCTCACCT ATAAAGAGTGGCGACTATTTGAAAGAGCGATTGAGCGCTACATACAAATAG

Peptide Sequence

PEP ID	Os10t0523100-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:20295357:20299451:1 gene:Os10g0523100 transcript:Os10t0523100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isopenicillin N synthase family protein. (Os10t0523100-01);Isopenicillin N synthase family protein. (Os10t0523100-02)
Sequence	MAGGGGGGNRLDLPVVDLASSDPRAAAESIRKACVESGFFYVVNHGVEEGLLKRLFAESS KFFELPMEEKIALRRNSNHRGYTPPYAEKLDPSSKFEGDLKESFYIGPIGDEGLQNDANQ WPSEERLPSRRETIKMYHASALSTGKRILSLIALSLNLDAEFFENIGAFSCPSAFLRLLH YPGEVDDSDDGNYGASAHSDYGMITLLATDGTPGLQICREKNRNPQLWEDVHHIDGALIV NIGDLLERWTNCIYRSTVHRVVAVGKERYSAAFFLDPNPDLVVQCLESCCSESCPPRFSP IKSGDYLKERLSATYK

Transcript Sequence

Transcript ID	Os10t0523100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20295357:20299451:1 gene:Os10g0523100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Isopenicillin N synthase family protein. (Os10t0523100-01);Isopenicillin N synthase family protein. (Os10t0523100-02)
Sequence	GCAGCAGCAGCAAACCGCCGCTTTGGCAGAAGAGGAATCCGGGATGGCCGGCGGCGGCGG CGGCGGGAATCGCCTGGACCTCCCCGTGGTGGACCTCGCGTCCTCCGACCCCCGAGCCGC CGCCGAGTCCATCCGAAAGGCGTGCGTGGAGTCCGGATTCTTCTACGTGGTCAACCATGG GGTGGAGGAGGGATTGCTGAAGAGGTTGTTCGCGGAGAGCTCGAAGTTCTTCGAGCTGCC GATGGAGGAGAAGATAGCGCTGCGGAGGAACAGCAACCACCGGGGATACACCCCGCCCTA CGCCGAGAAGCTCGATCCCTCGTCCAAATTCGAAGGAGACCTCAAGGAAAGTTTCTATAT TGGGCCTATTGGAGATGAAGGTTTGCAGAATGATGCTAACCAGTGGCCTTCTGAAGAGCG CTTACCAAGTCGGAGGGAGACAATTAAGATGTACCATGCAAGTGCACTGTCTACTGGCAA AAGGATACTCTCTCTAATCGCTCTGAGTTTGAATCTTGACGCTGAATTCTTTGAGAACAT TGGTGCCTTCAGCTGCCCATCAGCATTTCTTCGATTATTGCACTACCCAGGTGAAGTAGA CGACTCTGATGATGGCAATTATGGTGCATCAGCTCACTCTGATTATGGAATGATAACCCT CCTAGCAACAGACGGCACTCCTGGGCTACAGATATGCAGGGAAAAGAATAGGAATCCCCA GCTCTGGGAAGATGTTCATCACATTGATGGGGCCCTGATTGTTAACATTGGCGATTTGCT AGAAAGGTGGACGAATTGTATTTACAGGTCTACAGTGCACCGTGTTGTTGCAGTTGGTAA AGAGCGATATTCTGCGGCTTTTTTTCTTGACCCAAACCCTGATTTAGTGGTTCAGTGTTT GGAAAGCTGTTGCAGCGAGTCATGCCCACCGAGGTTCTCACCTATAAAGAGTGGCGACTA TTTGAAAGAGCGATTGAGCGCTACATACAAATAGTCCTATGCTTTTTCATGTGTAAAAGG AGGCTAACATGTGCTACACGGCCGGCCATCGTTCTCCATTGTCCATTTTTCTTCTGCGTT TAGACATCACAGTAGTCCAGAAGGTTGTTTGTGTTGTTTTACTGTAACGCTGTAAAGAAA AAGTCTGCAGTGATGTGCTATGCTTGATTTCTCTCTCCACTGCTCGACACCAACCTGAAC TTTTTATTGTTTGTCGTTCAAAAAAAAAACTTTTTATTGTCACCTGCGAGCTGACTGGTG TTTGGACTAGTATTCTTGTTGACTTGGTAAAGAAACTCCAGTTTGATCC