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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0522500-02
CDS Infomation

cds chromosome:IRGSP-1.0:10:20257020:20259561:1 gene:Os10g0522500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0522500-01);Similar to predicted protein. (Os10t0522500-02)
Sequence

ATGCCTCTCCTCGCCCGCGCGCCACCGCCTCCACCACCGCTCCGCCACCGCGGCCGCCTC
CTCCCGCGCTTCACCTCCTCCTCCAGTCCCCGCCGCCGCCGCCGCCCACGCGCCGCCCGC
GTCCGCGCCTCCGGCTCCGACCCGCCGCCGCAGCAGCAGCAGCAGCAGGTCAACCTCTCC
GTCCTCCGCTTCACCCTCGGGATTCCCGGGCTGGACGAGTCGTACCTCCCGCGGTGGATA
GGCCTCGGCTTCGGCGCCCTCGTGCTCCTCAACCACCTCCTCTCCCCGTCGCCCACCCCC
GCGCAGCTCAGGTCGGAGGCACTCGGGCTGTGCCTGGCCGCGTTCTCGGCGACTCTGCCG
TACCTCGGGAGGTTCCTAGAGGGTGCTGGTGCTGCTGAACGTGTGCCCTTGCCTGAGGGG
AGCAGGCAGGTGTTTGCCATGTCTGATAGCCTGTCAGCAGCACAGAAGGAGGACATGGCG
TGGGCTTCGTACGTCCTGCTGCGGAACACAAACACCACATCTGTCTTTTGA

Peptide Sequence

PEP ID

Os10t0522500-02
PEP Infomation

pep chromosome:IRGSP-1.0:10:20257020:20259561:1 gene:Os10g0522500 transcript:Os10t0522500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0522500-01);Similar to predicted protein. (Os10t0522500-02)
Sequence

MPLLARAPPPPPPLRHRGRLLPRFTSSSSPRRRRRPRAARVRASGSDPPPQQQQQQVNLS
VLRFTLGIPGLDESYLPRWIGLGFGALVLLNHLLSPSPTPAQLRSEALGLCLAAFSATLP
YLGRFLEGAGAAERVPLPEGSRQVFAMSDSLSAAQKEDMAWASYVLLRNTNTTSVF

Transcript Sequence

Transcript ID

Os10t0522500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:20257020:20259561:1 gene:Os10g0522500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0522500-01);Similar to predicted protein. (Os10t0522500-02)
Sequence

AGCCAACCAAATCCGCACCAACCACACCATGCCTCTCCTCGCCCGCGCGCCACCGCCTCC
ACCACCGCTCCGCCACCGCGGCCGCCTCCTCCCGCGCTTCACCTCCTCCTCCAGTCCCCG
CCGCCGCCGCCGCCCACGCGCCGCCCGCGTCCGCGCCTCCGGCTCCGACCCGCCGCCGCA
GCAGCAGCAGCAGCAGGTCAACCTCTCCGTCCTCCGCTTCACCCTCGGGATTCCCGGGCT
GGACGAGTCGTACCTCCCGCGGTGGATAGGCCTCGGCTTCGGCGCCCTCGTGCTCCTCAA
CCACCTCCTCTCCCCGTCGCCCACCCCCGCGCAGCTCAGGTCGGAGGCACTCGGGCTGTG
CCTGGCCGCGTTCTCGGCGACTCTGCCGTACCTCGGGAGGTTCCTAGAGGGTGCTGGTGC
TGCTGAACGTGTGCCCTTGCCTGAGGGGAGCAGGCAGGTGTTTGCCATGTCTGATAGCCT
GTCAGCAGCACAGAAGGAGGACATGGCGTGGGCTTCGTACGTCCTGCTGCGGAACACAAA
CACCACATCTGTCTTTTGATTCTTGCTAGCTCATATCAATTGGCAATCAGTTGTGCATAC
GAGGATATTGGGATCCGCCTGAAGATATTTCCAAATATGCCATGATTGAGTGGTTCAAAA
GTCAGATGCAGGAAGCTGGAATTGTTGATTTGAGGGAGGATTTGTACTTCCCTACCTTTT
CTGGTAAATGCCACTCTCTTAGGCCCTGCAGAATGCCAGAGCATATTTCTATGTTTAAGT
TTTGTTCTTTTCTCCCCCTTTTCTGGCATAAGTGAGTCTCTGCAACTGTTTTCTTGTAAC
AAATGGCAAAGATTTGTATGTGTGGAACTGTGGGTTGATAACATTGAGATGAATGCATGA
AGCATCATACCGTTTGTGCTG