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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0521100-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:20160992:20162434:-1 gene:Os10g0521100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 10 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os10t0521100-01)
Sequence

ATGGAGATTCTTGGATTCACTGTTATGGGTGGCGGCGGCTCGCCGGCGTGGATCGAGGTG
CCGGAGAAGAGCAAGAGCGCGTTCTGGGAGCTGAAGAGGAGGAAGGTGCACCGCTACGTG
ATTTTCAAGATCGACGACAGGCGGGAGGAGATCGTCGTCGAGAAGACCGGCGCGCCGGGG
GAGAGCTACGACGACTTCACGGCGTCGCTGCCCGCCGACGACTGCCGGTACGCCGTCTAC
GATCTGGATTTCGTCAGCGACGACAACTGCAGGAAGAGCAAGATATTCTTCATCTCATGG
TCCCCTTCTGTTTCCCGCATCCGAGCCAAGACCATATACGCCGTGTCGAGGAACCAATTT
CGGCACGAGCTTGACGGTGTGCACTTTGAGATTCAGGCCACGGACCCTGATGACATGGAT
TTGGAAGTTCTCAGGGGCCGTGCTAATAGAACCTGA

Peptide Sequence

PEP ID

Os10t0521100-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:20160992:20162434:-1 gene:Os10g0521100 transcript:Os10t0521100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 10 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os10t0521100-01)
Sequence

MEILGFTVMGGGGSPAWIEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPG
ESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQF
RHELDGVHFEIQATDPDDMDLEVLRGRANRT

Transcript Sequence

Transcript ID

Os10t0521100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:20160992:20162434:-1 gene:Os10g0521100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:actin depolymerizing factor 10 description:Similar to Actin-depolymerizing factor 6 (ADF-6) (AtADF6). (Os10t0521100-01)
Sequence

GTAGTGTAGCGTGGGTGTGGGTGTATGGTCTGACCGTCCATGGAGATTCTTGGATTCACT
GTTATGGGTGGCGGCGGCTCGCCGGCGTGGATCGAGGTGCCGGAGAAGAGCAAGAGCGCG
TTCTGGGAGCTGAAGAGGAGGAAGGTGCACCGCTACGTGATTTTCAAGATCGACGACAGG
CGGGAGGAGATCGTCGTCGAGAAGACCGGCGCGCCGGGGGAGAGCTACGACGACTTCACG
GCGTCGCTGCCCGCCGACGACTGCCGGTACGCCGTCTACGATCTGGATTTCGTCAGCGAC
GACAACTGCAGGAAGAGCAAGATATTCTTCATCTCATGGTCCCCTTCTGTTTCCCGCATC
CGAGCCAAGACCATATACGCCGTGTCGAGGAACCAATTTCGGCACGAGCTTGACGGTGTG
CACTTTGAGATTCAGGCCACGGACCCTGATGACATGGATTTGGAAGTTCTCAGGGGCCGT
GCTAATAGAACCTGATAGAGATTGACTTCGATAGTTTGTTAATTAGCCTTCTTTTGCATA
ACTTTAATATGTAGCTCGCTGCTGAAAATGCATCTCGGGTGCATGATGTATAAGCAAGCT
GCTGATCACACCCCAGCATTGCAGTTTTACCTTCTTTTTTTACAGAGATAACATCTTTCT
GATATCTGTCTAATTATATATGTTCCCTCTAATATGATATGGAAATTGTGCCTTGTTATA
TCTAAATTTGTAATATACTGTATTTCTGCTGTTTGATATTG