Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0520700-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:20140666:20144848:-1 gene:Os10g0520700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, HIT-type domain containing protein. (Os10t0520700-01)
Sequence	ATGGAGAGGGAAGTCGTGGTCTCCGAGGACGCGGCCGCCTCCTCCTCCTCCTCCTCCTCC TCCGCCGCCGCCGCCTCGTTCTCCCTCGCGGAAACCAGGGTCATCTGCCGCGTGTGCCAG AAGCAGTTCGCGCAGTACACTTGCCCCCGTTGTAACGCCCGGTACTGCTCGCTCCCGTGC TACAAGGGGCATAGTGTTCAGTGCACTGAATCCTTCATGCGTGAGAATGTTATGGATGAG CTTAAGCAGATGCAACCTGAAGATGAATCAAAGAAGAAGATGTTAGACATACTTAAAAGG TTCCACTTGGAAGAAGAAGATATGGATTCAGAAGGCGAAGATGAGTCAATTCTGTCAGAG GAGCTTATTCAAAAAGTTATGTCTGGAGATGAGATCAAGCTTGAAGACCTCTCTGATGAT GAAATCAAACGATTTCGTCAAGCTCTGGCTTCAGGTGAACTCAGCAAGATGATCGAGCCA TGGACACCATGGTGGAAAAAACCTTCCGCTAGATCGATTTCCCTCAGTCCAGATGGAAGC CAGCTTATCAGACAAGTGAGTGTAGAAGACACTGATACGTCAGATCCAATGGCTGACCCA GAGTCTAGCATCAGTGAAATCCCAGAAGGGCCAGAATCTGCTCTCCCGTCACTCGAACAG CTAACCAGAGCGGAGCCATCTCCGCTGCTTGCGGTTCACTTGGTTGATATACTGTACAGT TACTGCTTCACACTTCGCCTCCACAATGGCGATTGGCGCTCTGATCCTTTTGGTGCCTCT ACTGTTGCGTTGTCTGTGTCAAAAGTCATGGGGGAGGATGCTAAACCTGAGACAGTATCT GAAGCCCTCACGGCATGTATAGAGGAGACATGCTCACCGGCTTACAGGCACACCGGAGGT TTCAGGTTTGCTATAGCTCTCGTGGATGATATCATCAGCCTTCTCACGTTAGGAGGCAAT GCGCTTGTTTGTGCCCTCTGTGACTTCCGCAGGCTCATTCATATCGGTGAGAGGATGCTC AAGGCAGAGAAATTGGGCAAGGCGGAGCGATCACGGAGCACCCAAAAGCTTCGTGCCGCA GATAGGAAGTTGTACTTCATGACATGCTGGGTTCATGAGCAACCAAATGAGGCATGGTCG TCTTTAGCTCGCCTCGTTGAGGTGCAGAAAGCATCTCTGGAGGAGTTGGATTGCGGGAGT CAATTTCAAAGGGCTGGTAGAAAGAACGATGCCCAATCCAAGGTTCTTATTGAGGAGATT TGA

Peptide Sequence

PEP ID	Os10t0520700-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:20140666:20144848:-1 gene:Os10g0520700 transcript:Os10t0520700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, HIT-type domain containing protein. (Os10t0520700-01)
Sequence	MEREVVVSEDAAASSSSSSSSAAAASFSLAETRVICRVCQKQFAQYTCPRCNARYCSLPC YKGHSVQCTESFMRENVMDELKQMQPEDESKKKMLDILKRFHLEEEDMDSEGEDESILSE ELIQKVMSGDEIKLEDLSDDEIKRFRQALASGELSKMIEPWTPWWKKPSARSISLSPDGS QLIRQVSVEDTDTSDPMADPESSISEIPEGPESALPSLEQLTRAEPSPLLAVHLVDILYS YCFTLRLHNGDWRSDPFGASTVALSVSKVMGEDAKPETVSEALTACIEETCSPAYRHTGG FRFAIALVDDIISLLTLGGNALVCALCDFRRLIHIGERMLKAEKLGKAERSRSTQKLRAA DRKLYFMTCWVHEQPNEAWSSLARLVEVQKASLEELDCGSQFQRAGRKNDAQSKVLIEEI

Transcript Sequence

Transcript ID	Os10t0520700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20140666:20144848:-1 gene:Os10g0520700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, HIT-type domain containing protein. (Os10t0520700-01)
Sequence	GCCGCGGCGCACACCGGAATCCACCGCCGACGCTCCGGCGCCACCGAGGGAGGGGGTGAG GAACGCGGGGGAGAAGCGTCGTAGGCGAGGTGCCGGCGATGGAGAGGGAAGTCGTGGTCT CCGAGGACGCGGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCTCGTTCT CCCTCGCGGAAACCAGGGTCATCTGCCGCGTGTGCCAGAAGCAGTTCGCGCAGTACACTT GCCCCCGTTGTAACGCCCGGTACTGCTCGCTCCCGTGCTACAAGGGGCATAGTGTTCAGT GCACTGAATCCTTCATGCGTGAGAATGTTATGGATGAGCTTAAGCAGATGCAACCTGAAG ATGAATCAAAGAAGAAGATGTTAGACATACTTAAAAGGTTCCACTTGGAAGAAGAAGATA TGGATTCAGAAGGCGAAGATGAGTCAATTCTGTCAGAGGAGCTTATTCAAAAAGTTATGT CTGGAGATGAGATCAAGCTTGAAGACCTCTCTGATGATGAAATCAAACGATTTCGTCAAG CTCTGGCTTCAGGTGAACTCAGCAAGATGATCGAGCCATGGACACCATGGTGGAAAAAAC CTTCCGCTAGATCGATTTCCCTCAGTCCAGATGGAAGCCAGCTTATCAGACAAGTGAGTG TAGAAGACACTGATACGTCAGATCCAATGGCTGACCCAGAGTCTAGCATCAGTGAAATCC CAGAAGGGCCAGAATCTGCTCTCCCGTCACTCGAACAGCTAACCAGAGCGGAGCCATCTC CGCTGCTTGCGGTTCACTTGGTTGATATACTGTACAGTTACTGCTTCACACTTCGCCTCC ACAATGGCGATTGGCGCTCTGATCCTTTTGGTGCCTCTACTGTTGCGTTGTCTGTGTCAA AAGTCATGGGGGAGGATGCTAAACCTGAGACAGTATCTGAAGCCCTCACGGCATGTATAG AGGAGACATGCTCACCGGCTTACAGGCACACCGGAGGTTTCAGGTTTGCTATAGCTCTCG TGGATGATATCATCAGCCTTCTCACGTTAGGAGGCAATGCGCTTGTTTGTGCCCTCTGTG ACTTCCGCAGGCTCATTCATATCGGTGAGAGGATGCTCAAGGCAGAGAAATTGGGCAAGG CGGAGCGATCACGGAGCACCCAAAAGCTTCGTGCCGCAGATAGGAAGTTGTACTTCATGA CATGCTGGGTTCATGAGCAACCAAATGAGGCATGGTCGTCTTTAGCTCGCCTCGTTGAGG TGCAGAAAGCATCTCTGGAGGAGTTGGATTGCGGGAGTCAATTTCAAAGGGCTGGTAGAA AGAACGATGCCCAATCCAAGGTTCTTATTGAGGAGATTTGAGCGTGAGAATGTATTGATG CAAGTGATACTCATAATCTTCTTACCCCTATATCAGCTGTATCATGTATGGCTGTATAAT CTTTGTTGTAAAGAACTTCGGATGTTACTTCCCCATGAGTTTCTGATGTCAAATCTGATA TGTTAAAGGAGTTGTATGCAATTCTGAAATCCTGATATGAAAGCCATATTGGCAGAATTC AGATGCC