Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0520600-02
CDS Infomation	cds chromosome:IRGSP-1.0:10:20135412:20139736:-1 gene:Os10g0520600 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain containing protein. (Os10t0520600-01);Similar to fas-associated factor 1-like protein. (Os10t0520600-02)
Sequence	ATGGCGGAGACCGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGAC CACGACCTCTGCACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCC TCCATCACCGCCAACCCCTCCTCCCCCGACCCGGCCCCCTCCGCGCCCCTGCCCCCGCTG GCACCGAGGGAGGCGGATTTGGTCGCGCCGCACCTGCCTCCGCCTCCGCAGCAGCAGCAG CAGCAGCAGCAGCCGGGGATCGCGTGGAAGCTCGTGACGCTCCCCTTCTACGTGGTCTCC GGTGGGGTTGGGCTCATCGCCGGTTCGATCCGTCTCGGTGCCTGGGTCGCCGGAGGTGTG CTGTCTCGCTCCCTCTCCATCCTCGGCCTCGCGCAGGGCGGGGGCGGAGGAGGCGACCGG CTTCTCGAGCTGCCCCCGTCGGCGGCCGAGGCGGCTGACTTCGTGGCGGAGTTCGAGCGC GAGTTCGGCGCCGGCCGTGGCCCCCACTTCGTCGCCGAGGGCTTCGCGGATGCGTTGCAG CGTGCGCAGCGCGAGTACAAGCTTCTCTTCGTGTACCTGCACTCCCCTGATCACCCGGAC ACCCCTGCCTTCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAG AACTTCGTTGCGTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGC CTGAATGCATCGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATT GTGTTGTTGCGGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAA GGGGCAGTTGAAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGG CTAAACAATCAACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCT GATCAGGCCAGGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCA GAGGCTGAGAGAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCA GCTGAGAAAGAAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCA GAACCTGAGAAAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGC AAAGAAAGGAGATTCAACAGTTCCACTACCATCACTTCACTGTATGACTATGTTGATTCT TTGGACTGCTTGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATAC GGTCCAGAAAAACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTG TTTATTGAGATAGAACAATGA

Peptide Sequence

PEP ID	Os10t0520600-02
PEP Infomation	pep chromosome:IRGSP-1.0:10:20135412:20139736:-1 gene:Os10g0520600 transcript:Os10t0520600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain containing protein. (Os10t0520600-01);Similar to fas-associated factor 1-like protein. (Os10t0520600-02)
Sequence	MAETVDDKVSYFQAVTGISDHDLCTEILAAHNWDLQLAVSSITANPSSPDPAPSAPLPPL APREADLVAPHLPPPPQQQQQQQQPGIAWKLVTLPFYVVSGGVGLIAGSIRLGAWVAGGV LSRSLSILGLAQGGGGGGDRLLELPPSAAEAADFVAEFEREFGAGRGPHFVAEGFADALQ RAQREYKLLFVYLHSPDHPDTPAFCGGCLCAEPVAAFIDENFVAWGGSIRRTEGFKMSNS LNASRFPFCAVVMASTNQRIVLLRQIEGPKSPEEMITTLQGAVEECSASLVAARIDAEER LNNQRLREEQDAAYRAALEADQARERQRREEQEKREREAAEAERKRKEEEEAQERAAQEA AEKEAALARRRQEKAMALGAEPEKGPDVTRVLIRFPTGERKERRFNSSTTITSLYDYVDS LDCLKAEKYSLVSNFPRVTYGPEKLSQTLEEAGLHPQASLFIEIEQ

Transcript Sequence

Transcript ID	Os10t0520600-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:20135412:20139736:-1 gene:Os10g0520600 gene_biotype:protein_coding transcript_biotype:protein_coding description:UBX domain containing protein. (Os10t0520600-01);Similar to fas-associated factor 1-like protein. (Os10t0520600-02)
Sequence	AGACGTCACCACTACTGACTCGTCTTCCTCCCACCTCGGTCGCGCCCCACGATTAACTCC GCCCCTTCTCGCCTCTTCCTTCGTGCTAACTACTACCGCCGCCGCCGCCGCCGCCGACGC CAAATCCCCAAACCCTAGCTCCGCCCTCGGCCTCGCCGCCGCCCGCCGCCATGGCGGAGA CCGTCGACGACAAGGTCAGCTACTTCCAGGCGGTCACCGGCATCTCCGACCACGACCTCT GCACCGAGATCCTCGCCGCCCACAACTGGGACCTCCAGCTCGCCGTCTCCTCCATCACCG CCAACCCCTCCTCCCCCGACCCGGCCCCCTCCGCGCCCCTGCCCCCGCTGGCACCGAGGG AGGCGGATTTGGTCGCGCCGCACCTGCCTCCGCCTCCGCAGCAGCAGCAGCAGCAGCAGC AGCCGGGGATCGCGTGGAAGCTCGTGACGCTCCCCTTCTACGTGGTCTCCGGTGGGGTTG GGCTCATCGCCGGTTCGATCCGTCTCGGTGCCTGGGTCGCCGGAGGTGTGCTGTCTCGCT CCCTCTCCATCCTCGGCCTCGCGCAGGGCGGGGGCGGAGGAGGCGACCGGCTTCTCGAGC TGCCCCCGTCGGCGGCCGAGGCGGCTGACTTCGTGGCGGAGTTCGAGCGCGAGTTCGGCG CCGGCCGTGGCCCCCACTTCGTCGCCGAGGGCTTCGCGGATGCGTTGCAGCGTGCGCAGC GCGAGTACAAGCTTCTCTTCGTGTACCTGCACTCCCCTGATCACCCGGACACCCCTGCCT TCTGCGGTGGCTGCCTCTGCGCTGAGCCAGTCGCGGCCTTCATAGATGAGAACTTCGTTG CGTGGGGTGGTAGCATCAGGAGGACTGAAGGGTTCAAGATGAGCAACAGCCTGAATGCAT CGAGGTTCCCTTTCTGCGCGGTGGTCATGGCGTCTACGAACCAGAGAATTGTGTTGTTGC GGCAGATTGAGGGGCCCAAATCACCTGAAGAGATGATAACAACTCTTCAAGGGGCAGTTG AAGAATGCAGTGCATCACTCGTTGCTGCTAGGATTGATGCTGAAGAGAGGCTAAACAATC AACGCTTGCGTGAGGAACAAGATGCTGCTTATAGAGCTGCACTTGAAGCTGATCAGGCCA GGGAACGCCAACGGAGAGAGGAGCAGGAAAAGCGTGAAAGAGAGGCTGCAGAGGCTGAGA GAAAGCGCAAAGAAGAAGAGGAGGCTCAAGAAAGGGCTGCCCAAGAAGCAGCTGAGAAAG AAGCCGCTCTTGCAAGGAGGAGACAAGAGAAGGCCATGGCTCTTGGAGCAGAACCTGAGA AAGGACCAGATGTTACTCGAGTTCTTATAAGATTTCCAACTGGAGAGCGCAAAGAAAGGA GATTCAACAGTTCCACTACCATCACTTCACTGTATGACTATGTTGATTCTTTGGACTGCT TGAAAGCAGAGAAGTACAGCCTAGTTTCGAACTTCCCGAGGGTGACATACGGTCCAGAAA AACTCTCCCAAACGCTGGAGGAAGCAGGTTTGCATCCGCAGGCGAGCTTGTTTATTGAGA TAGAACAATGAGGTGTTAAGTTTGTAAGTTCTGAACGGAAACCTGCAGGTATAGGTGCTC CTTTTACAATTTATTTAACAACAGTGAGGAACTTCTTGTATGACATTATACTGAGAAATG TCTTCGATGCAAATCTTCTTTTGTGCTTCTCATTTATATTCAATAAATTCACCTTCACCC