Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0517400-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:19997790:20001172:1 gene:Os10g0517400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase family protein. (Os10t0517400-01)
Sequence

ATGGCTCTGCCGGTGACCACCAGGGCGGCGCCGGCGATGCCCTTCGCGCCGCAGCCGCGC
ACCGCCGGCGGCGGCCTCCTCCGGCGACCGTCGCCGCCTGCCGCCGCGCTGCGCATCGCG
CCGCCCCTCTTCTGGCCGTGGCAGAAGGTGAAAGTCGGTCCCCTTTCTGTTTCGCCTATG
GGATTTGGAACATGGGCTTGGGGGAACCAGCTACTTTGGGGATATCAAGAAAGCATGGAT
ACTGAACTTCAGGAGTGTTTCAATTTGGCTCTGAAGAATGGCATAAACCTTTTTGACACT
GCTGACTCTTATGGAACTGGAAGGTTGAATGGTCAGAGCGAAAGGCTCCTCGGTAAATTT
ATCCGCGAGTATGAAGGGCCGATGAAGTCCCCTGATGATGTGATCATTGCAACCAAGTTT
GCAGCATATCCTTGGCGGCTAACATCAGGCCAATTTGTCAGCGCCTGCAAGTCTTCTTTG
GAAAGATTGCAGCTTGATCGGCTCGGGATAGGACAGCTGCATTGGTCTACTGCTAACTAT
GCACCTCTGCAGGAGCGTGCTCTTTGGGATGGTCTAGTTGAGATGTATGAAAAGGGTTTG
GTTCGTGCTGTCGGCGTCAGCAATTATGGGCCCAAGCAGCTTCTGAAGATCCACAGCCAT
CTATCATCTAGAGGTGTTCCATTGAGCTCAGCTCAGGTTCAGTTCTCACTACTGAGCATG
GGGGATGAGCAGATGGAGCTGAAAACTGTGTGTGATTCTTTGGGCATTCGTCTGATTGCT
TATAGTCCACTTGGATTAGGAATGCTGACAGGAAAGTATACTACTTCTAACCTTCCAAGT
GGACCAAGGTCTGTGTTGTTCCGGCAAATTCTTCCTGGGTTGGAATCTCTGCTGACTTGT
CTGAAAAGAATTGCAGAAAGGAAGGGGAAGACCATGTCTCAAGTGGCCATAAATTGGTGC
ATCTGCAAGGGCACAATTCCTATTCCAGGTGTCAAAACAGTCAGGCACGTCGAGGATAAC
TTGGGAGCACTGGGCTGGAGGCTTAGCCCTGCTGAAGTTTCAGAGCTCGAAGCTGCAGCA
ATGGAGTCTCCGAAGAGAATGGTCCAGAACATATTCCAAACTGCATGA

Peptide Sequence

PEP ID

Os10t0517400-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:19997790:20001172:1 gene:Os10g0517400 transcript:Os10t0517400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase family protein. (Os10t0517400-01)
Sequence

MALPVTTRAAPAMPFAPQPRTAGGGLLRRPSPPAAALRIAPPLFWPWQKVKVGPLSVSPM
GFGTWAWGNQLLWGYQESMDTELQECFNLALKNGINLFDTADSYGTGRLNGQSERLLGKF
IREYEGPMKSPDDVIIATKFAAYPWRLTSGQFVSACKSSLERLQLDRLGIGQLHWSTANY
APLQERALWDGLVEMYEKGLVRAVGVSNYGPKQLLKIHSHLSSRGVPLSSAQVQFSLLSM
GDEQMELKTVCDSLGIRLIAYSPLGLGMLTGKYTTSNLPSGPRSVLFRQILPGLESLLTC
LKRIAERKGKTMSQVAINWCICKGTIPIPGVKTVRHVEDNLGALGWRLSPAEVSELEAAA
MESPKRMVQNIFQTA

Transcript Sequence

Transcript ID

Os10t0517400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:19997790:20001172:1 gene:Os10g0517400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aldo/keto reductase family protein. (Os10t0517400-01)
Sequence

GAGGGGATTTTTATCAAGAGATTTAACGGACGAGAACGCGCCGCCCAAATTCCGCGCCTC
GTCGACCTCGGCTCCGGCCACCGATCGATGGCTCTGCCGGTGACCACCAGGGCGGCGCCG
GCGATGCCCTTCGCGCCGCAGCCGCGCACCGCCGGCGGCGGCCTCCTCCGGCGACCGTCG
CCGCCTGCCGCCGCGCTGCGCATCGCGCCGCCCCTCTTCTGGCCGTGGCAGAAGGTGAAA
GTCGGTCCCCTTTCTGTTTCGCCTATGGGATTTGGAACATGGGCTTGGGGGAACCAGCTA
CTTTGGGGATATCAAGAAAGCATGGATACTGAACTTCAGGAGTGTTTCAATTTGGCTCTG
AAGAATGGCATAAACCTTTTTGACACTGCTGACTCTTATGGAACTGGAAGGTTGAATGGT
CAGAGCGAAAGGCTCCTCGGTAAATTTATCCGCGAGTATGAAGGGCCGATGAAGTCCCCT
GATGATGTGATCATTGCAACCAAGTTTGCAGCATATCCTTGGCGGCTAACATCAGGCCAA
TTTGTCAGCGCCTGCAAGTCTTCTTTGGAAAGATTGCAGCTTGATCGGCTCGGGATAGGA
CAGCTGCATTGGTCTACTGCTAACTATGCACCTCTGCAGGAGCGTGCTCTTTGGGATGGT
CTAGTTGAGATGTATGAAAAGGGTTTGGTTCGTGCTGTCGGCGTCAGCAATTATGGGCCC
AAGCAGCTTCTGAAGATCCACAGCCATCTATCATCTAGAGGTGTTCCATTGAGCTCAGCT
CAGGTTCAGTTCTCACTACTGAGCATGGGGGATGAGCAGATGGAGCTGAAAACTGTGTGT
GATTCTTTGGGCATTCGTCTGATTGCTTATAGTCCACTTGGATTAGGAATGCTGACAGGA
AAGTATACTACTTCTAACCTTCCAAGTGGACCAAGGTCTGTGTTGTTCCGGCAAATTCTT
CCTGGGTTGGAATCTCTGCTGACTTGTCTGAAAAGAATTGCAGAAAGGAAGGGGAAGACC
ATGTCTCAAGTGGCCATAAATTGGTGCATCTGCAAGGGCACAATTCCTATTCCAGGTGTC
AAAACAGTCAGGCACGTCGAGGATAACTTGGGAGCACTGGGCTGGAGGCTTAGCCCTGCT
GAAGTTTCAGAGCTCGAAGCTGCAGCAATGGAGTCTCCGAAGAGAATGGTCCAGAACATA
TTCCAAACTGCATGAGCACACATATATATAAGGATCGCTCCAACCATCAGTAATTCAGTG
AGAGAGAATTAGAAGTGTGCATTTCTCCTAATTGAGAATTCATCACTGTAAATACATATT
CCAGCCAAGTGTTTCAGTCTGAAGAATATATATAGACTGTGACACGCACGAAGTGCCATA
ATCTTACTGAGAAAGAAGGTTGCTGC