Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0513900-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:19810238:19812025:1 gene:Os10g0513900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 family protein. (Os10t0513900-01)
Sequence

ATGGCCACGGACACCTCATGGCTCCTGCTCCTCGTCGCTCTCGTCCTCCCGCTCGTCGTC
CTCCTCGCGCGGCGGCGCCGGAGCGGCGGTGGCAGCCGCCGCATCCCGCCTGGCCCGCTC
GCCGTGCCGGTGCTCGGAAGCCTCCTGTGGCTGAGGCACTCCTCGGCGAACTTGGAGCCG
CTCCTCCAGCGCCTGATCGCGCGGTACGGCCCCGTCGTGTCGCTGCGCGTGGGCTCCCGC
CTCTCCATCTTCGTCGCCGACCGCCGCGTCGCGCACGCGGCCCTGGTGGAGCGCGGCGCC
GCGCTCGCCGACCGCCCGGACGTCACGCGCTCGCTGCTCGGCGAGACCGGCAACACCATC
ACGCGCTCCAGCTACGGCCCCGTGTGGCGTGTCCTCCGCCGCAACCTCGTCGCCGAGACG
CTGCACCCGTCGCGCGTCCGCCTGTTCGCGCCCGCGCGCTCCTGGGTTCGCCGAGTGCTC
GTCGACAAGCTCGCGGACGGCGCGCGCCCCGAGTCCGAGCCGCCACGCCCGCGCGTGGTG
GTGGAGACGTTCCGGTACGCCATGTTCTGCCTCCTCGTGCTCATGTGCTTCGGCGAGCGG
CTCGACGAGGCCGCGGTGCGCGCCATCGGCGCCGCGCAGCGCGACTGGCTCCTGTACGTC
GCGAGGAAGACGAGCGTATTCGCGTTCTACCCGGCGGTCACCAAGCACATCTTCCGCCGC
CGCCTCCAAATAGGCCTCGCCCTGCGACGGCAGCAGAAGGAGCTCTTTGTGCCACTCATC
GATGCCCGGCGAGCGCGCAAGAACCATATCCAGCAAGCCGGCGGCCCACCGGTGCCGGAG
AAGGAGACGACGTTCGAGCACTCGTACGTCGACACGCTGCTCGACGTAAGCCTCCCCGAC
ACCGACGGCGACAGCGCCCTCACCGAGGACGAGCTGGTGATGCTCTGCTCCGAGTTCCTC
AATGCCGGCACCGACACGACGGCCACCGCGCTGCAGTGGATCATGGCCGAGCTGGTCAAG
AACCCATCCATCCAATCCAAGCTCCACGACGAGATCAAGTCCAAGACCAGCGACGACGAG
ATCACCGAGGAGGACACCCACGACATGCCGTACCTGAAGGCCGTCATCCTCGAGGGCCTC
CGCAAGCACCCGCCGGCCCACTTCGTGCTGCCGCACAAGGCGGCGGAGGACGTCGAGGTC
GGCGGGTACCTCATCCCCAAGGGCGCGACGGTGAACTTCATGGTGGCCGAGATGGGAAGG
GACGAGAGGGAGTGGGAGAAGCCGATGGAGTTCATCCCTGAGCGGTTCCTCGCCGGCGGC
GACGGCGAGGGAGTGGACGTGACGGGCAGCCGGGAGGTCCGGATGATGCCGTTCGGCGTC
GGGAGGAGGATCTGTGCCGGGCTCGGCGTTGCCATGCTACACCTGGAGTATTTCGTGGCG
AATTTGGTGAAGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGACTTGACCGAG
AAGAATGAGTTCACCACTGTGATGGCAAAGCCGCTCCGTGCTCAGCTTGTTAAACGGGCT
TAG

Peptide Sequence

PEP ID

Os10t0513900-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:19810238:19812025:1 gene:Os10g0513900 transcript:Os10t0513900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 family protein. (Os10t0513900-01)
Sequence

MATDTSWLLLLVALVLPLVVLLARRRRSGGGSRRIPPGPLAVPVLGSLLWLRHSSANLEP
LLQRLIARYGPVVSLRVGSRLSIFVADRRVAHAALVERGAALADRPDVTRSLLGETGNTI
TRSSYGPVWRVLRRNLVAETLHPSRVRLFAPARSWVRRVLVDKLADGARPESEPPRPRVV
VETFRYAMFCLLVLMCFGERLDEAAVRAIGAAQRDWLLYVARKTSVFAFYPAVTKHIFRR
RLQIGLALRRQQKELFVPLIDARRARKNHIQQAGGPPVPEKETTFEHSYVDTLLDVSLPD
TDGDSALTEDELVMLCSEFLNAGTDTTATALQWIMAELVKNPSIQSKLHDEIKSKTSDDE
ITEEDTHDMPYLKAVILEGLRKHPPAHFVLPHKAAEDVEVGGYLIPKGATVNFMVAEMGR
DEREWEKPMEFIPERFLAGGDGEGVDVTGSREVRMMPFGVGRRICAGLGVAMLHLEYFVA
NLVKEFEWKEVAGDEVDLTEKNEFTTVMAKPLRAQLVKRA

Transcript Sequence

Transcript ID

Os10t0513900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:19810238:19812025:1 gene:Os10g0513900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome P450 family protein. (Os10t0513900-01)
Sequence

AGAGCAAAGGCAAGAAGACGCCATGGCCACGGACACCTCATGGCTCCTGCTCCTCGTCGC
TCTCGTCCTCCCGCTCGTCGTCCTCCTCGCGCGGCGGCGCCGGAGCGGCGGTGGCAGCCG
CCGCATCCCGCCTGGCCCGCTCGCCGTGCCGGTGCTCGGAAGCCTCCTGTGGCTGAGGCA
CTCCTCGGCGAACTTGGAGCCGCTCCTCCAGCGCCTGATCGCGCGGTACGGCCCCGTCGT
GTCGCTGCGCGTGGGCTCCCGCCTCTCCATCTTCGTCGCCGACCGCCGCGTCGCGCACGC
GGCCCTGGTGGAGCGCGGCGCCGCGCTCGCCGACCGCCCGGACGTCACGCGCTCGCTGCT
CGGCGAGACCGGCAACACCATCACGCGCTCCAGCTACGGCCCCGTGTGGCGTGTCCTCCG
CCGCAACCTCGTCGCCGAGACGCTGCACCCGTCGCGCGTCCGCCTGTTCGCGCCCGCGCG
CTCCTGGGTTCGCCGAGTGCTCGTCGACAAGCTCGCGGACGGCGCGCGCCCCGAGTCCGA
GCCGCCACGCCCGCGCGTGGTGGTGGAGACGTTCCGGTACGCCATGTTCTGCCTCCTCGT
GCTCATGTGCTTCGGCGAGCGGCTCGACGAGGCCGCGGTGCGCGCCATCGGCGCCGCGCA
GCGCGACTGGCTCCTGTACGTCGCGAGGAAGACGAGCGTATTCGCGTTCTACCCGGCGGT
CACCAAGCACATCTTCCGCCGCCGCCTCCAAATAGGCCTCGCCCTGCGACGGCAGCAGAA
GGAGCTCTTTGTGCCACTCATCGATGCCCGGCGAGCGCGCAAGAACCATATCCAGCAAGC
CGGCGGCCCACCGGTGCCGGAGAAGGAGACGACGTTCGAGCACTCGTACGTCGACACGCT
GCTCGACGTAAGCCTCCCCGACACCGACGGCGACAGCGCCCTCACCGAGGACGAGCTGGT
GATGCTCTGCTCCGAGTTCCTCAATGCCGGCACCGACACGACGGCCACCGCGCTGCAGTG
GATCATGGCCGAGCTGGTCAAGAACCCATCCATCCAATCCAAGCTCCACGACGAGATCAA
GTCCAAGACCAGCGACGACGAGATCACCGAGGAGGACACCCACGACATGCCGTACCTGAA
GGCCGTCATCCTCGAGGGCCTCCGCAAGCACCCGCCGGCCCACTTCGTGCTGCCGCACAA
GGCGGCGGAGGACGTCGAGGTCGGCGGGTACCTCATCCCCAAGGGCGCGACGGTGAACTT
CATGGTGGCCGAGATGGGAAGGGACGAGAGGGAGTGGGAGAAGCCGATGGAGTTCATCCC
TGAGCGGTTCCTCGCCGGCGGCGACGGCGAGGGAGTGGACGTGACGGGCAGCCGGGAGGT
CCGGATGATGCCGTTCGGCGTCGGGAGGAGGATCTGTGCCGGGCTCGGCGTTGCCATGCT
ACACCTGGAGTATTTCGTGGCGAATTTGGTGAAGGAGTTCGAGTGGAAGGAGGTGGCCGG
CGACGAGGTGGACTTGACCGAGAAGAATGAGTTCACCACTGTGATGGCAAAGCCGCTCCG
TGCTCAGCTTGTTAAACGGGCTTAGTTTTTTTTTTTTGAGTGTCTGTAAGACGGAACTGG
ATCCTCTGACGTGAACTGCTCCGTGACATGGTCACTAACAAGTGGGTCCGCGAGTGGTGG
GGTTCACATGTCAGTCACCACGTCTCTCTGACTTCACGTCAGAGGATCCCAATCCCTAAG
ACATGCATGCGCATCTTTCTACCATATGATTAATACCATAGATTCATG