Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0513300-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:19801017:19803677:1 gene:Os10g0513300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UPF0496 protein 4. (Os10t0513300-01);Similar to cDNA clone:J033112M21, full insert sequence. (Os10t0513300-02)
Sequence	ATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATCCCTTTCGAGTT ATGTTTCCAGGGGGAGCTCACCTATCTCGGAAGCTCCAAGAGTTGCTCGCTTCGTACGAG GATGCCCTGGCATTGAGCTTGAGGAAGCTCAAGCCGGAGGCCGCCTCGGATGTCCTCACC TTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCAACATAGCTAAC CTGATAACCGATCTCGAGCTGCCTGTCTCGGACTGGGATGACAAATGGGTGGACATTTAT CTCAACAGCAGCGTGAAGCTGCTGGATATTTGCATCGCGCTGAGCTCGGAGCTCTCTCGT CTGGATCAAGGGCAATTGCTGTTGCAGTATGCCCTGCATGTGTTGGGCTCGGAGAGTGGC GTGCCGTCGCAGGAGCAACTCAAGAGAGCTGAGCCATCACTTAGGGAGTGGATGGAGCTG GTGGGCGTAAGATGTGCAAGGCTTGTTAGCTGCTCGGCGACCTTGCAGGAGCTTGCTGGG AACCTTTCTCTGATGAAGGTCAAGAACTCCGCGAAAGGGAAAGTGCTCATGAGAGCGTTA TATGGAATCGAGTCTGTGACGGTGTTCGTATGCAGTATTTTTGTAGCTGTACTGTCTGGC AGCCCCAAGCCACTGGTGGAGTTGCATGTCCCTGAAAAATTTGGTTGGTCTCAGGCCTTC AATGACCTTCATACTGCAGTCAGTGAGGAACTCACAAGACAATTATCCGGTGGAAGTGTT GCAGCTGTAAAAGAGCTGGAAGAAGTTGAAGCATGTGCTAGAAGGCTGCATGTTTTGGCT AGCACTTCTCAGCTTGAAGAAGAAGCTGCCAACCTGGCAAATGCTGTTAGCCATACAGAG GAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTGGTCTTAAACTT GCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTGCAGAAGGGGGA ACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGGCAATGGTTGAG AGAATCAGTTACAAAGAGCACCAAGATAGTAACGTAAAGCAGGCGAATGGCAGCAGCGAT GAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGGAGGAACTATTA AACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGTTGGACTCCCTA TCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATGCATTGCTCTGC AACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTTGA

Peptide Sequence

PEP ID	Os10t0513300-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:19801017:19803677:1 gene:Os10g0513300 transcript:Os10t0513300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UPF0496 protein 4. (Os10t0513300-01);Similar to cDNA clone:J033112M21, full insert sequence. (Os10t0513300-02)
Sequence	MSRAHGSPRSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVLT LSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSR LDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCARLVSCSATLQELAG NLSLMKVKNSAKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAF NDLHTAVSEELTRQLSGGSVAAVKELEEVEACARRLHVLASTSQLEEEAANLANAVSHTE EEVMSDSIAQEGDHHCGLKLADDTTREGGIVISESIAEGGTQEAEMKKDISYEKEVAMVE RISYKEHQDSNVKQANGSSDESALVVPERTSVQESKEELLNCISSMSKSAEGLRHGLDSL SKRVGDFFQIVLTGRDALLCNLRISDAASKVAEVSS

Transcript Sequence

Transcript ID	Os10t0513300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:19801017:19803677:1 gene:Os10g0513300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to UPF0496 protein 4. (Os10t0513300-01);Similar to cDNA clone:J033112M21, full insert sequence. (Os10t0513300-02)
Sequence	GTTGGCTCCCACTCCCCCCCAAAAAAATCCAAACCGAGAAATAATAATCACAATAAAACT AAAAAGAAATCCGGGCCTAACGGGCCGCGCGGCCCAACCCCCAACCCCAACGTAATAACG TATCATTCCGCGTCTCGAACTTTCCACCTCTCCCAAATAATTTTCTTCTTTCCCCTTTTT TTCTCCTCTCCCCTTCGACTCAGTCTCGCACCGAAGAAGAAGAAGAGAGGAAGAAGACGC GACGATTGACGAGTAATCGAGCTCGATTTGAGCACCCCCGCGCGCGGATCCGCCGATCTA GTTCAGTGGAGATGAGTCGCGCACACGGTAGTCCCAGATCGTTCTTCCCTGTGGGGAATC CCTTTCGAGTTATGTTTCCAGGGGGAGCTCACCTATCTCGGAAGCTCCAAGAGTTGCTCG CTTCGTACGAGGATGCCCTGGCATTGAGCTTGAGGAAGCTCAAGCCGGAGGCCGCCTCGG ATGTCCTCACCTTGTCATGGATGAGGCTTGCAGTGGATTGCTTGTCAGAGCTGCACACCA ACATAGCTAACCTGATAACCGATCTCGAGCTGCCTGTCTCGGACTGGGATGACAAATGGG TGGACATTTATCTCAACAGCAGCGTGAAGCTGCTGGATATTTGCATCGCGCTGAGCTCGG AGCTCTCTCGTCTGGATCAAGGGCAATTGCTGTTGCAGTATGCCCTGCATGTGTTGGGCT CGGAGAGTGGCGTGCCGTCGCAGGAGCAACTCAAGAGAGCTGAGCCATCACTTAGGGAGT GGATGGAGCTGGTGGGCGTAAGATGTGCAAGGCTTGTTAGCTGCTCGGCGACCTTGCAGG AGCTTGCTGGGAACCTTTCTCTGATGAAGGTCAAGAACTCCGCGAAAGGGAAAGTGCTCA TGAGAGCGTTATATGGAATCGAGTCTGTGACGGTGTTCGTATGCAGTATTTTTGTAGCTG TACTGTCTGGCAGCCCCAAGCCACTGGTGGAGTTGCATGTCCCTGAAAAATTTGGTTGGT CTCAGGCCTTCAATGACCTTCATACTGCAGTCAGTGAGGAACTCACAAGACAATTATCCG GTGGAAGTGTTGCAGCTGTAAAAGAGCTGGAAGAAGTTGAAGCATGTGCTAGAAGGCTGC ATGTTTTGGCTAGCACTTCTCAGCTTGAAGAAGAAGCTGCCAACCTGGCAAATGCTGTTA GCCATACAGAGGAAGAGGTCATGTCAGACAGCATTGCGCAGGAAGGAGACCATCACTGTG GTCTTAAACTTGCTGATGACACTACCAGGGAGGGTGGAATAGTAATTTCAGAGAGTATTG CAGAAGGGGGAACACAAGAAGCTGAAATGAAGAAGGATATCAGCTATGAAAAGGAAGTGG CAATGGTTGAGAGAATCAGTTACAAAGAGCACCAAGATAGTAACGTAAAGCAGGCGAATG GCAGCAGCGATGAGAGCGCCCTGGTTGTTCCTGAGAGAACCAGTGTCCAGGAAAGCAAGG AGGAACTATTAAACTGCATATCCAGCATGTCGAAAAGCGCGGAGGGGCTCCGGCATGGGT TGGACTCCCTATCGAAGCGCGTAGGCGACTTCTTTCAGATCGTGCTTACGGGACGTGATG CATTGCTCTGCAACCTCAGGATCTCAGATGCAGCAAGCAAGGTCGCCGAGGTCAGCTCTT GATATTTTATGTAAGGTTTCTTGCCGTATAATGTTTGTGTGGCTAAGTGTGCGCCCAGCT TGGTAGCACAGCTTTGAACATTGTGCTTCTGACCTGTGGCCCCTGCTCAGCCCCACAGAA ACTAAGCTGGGGCCACATCTCAGAAGCATTGTGCATAGTCCTGTGCTGCTAGTTGTGCTT GTGCCGTGCAAATCTTCTAAGTCCATCGGCATCAGGCTCTGTGACTGTAAACTCAGCCTT GTCAAGTCCTATACAGTCATTTTGTTTACTTTTTGGTAAGAGTTAGTGCTCTACTCGTTG TAGCGCAGGTCATATGCGAGTGTATAGAGGCGTGAGTGTAGTAACTGTATGTAAGCTGGA GTGTGTTAGCAATATACGAGTAGATTAATGTGTTCTGCAAAGAGC