Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0513200-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:19778055:19785158:-1 gene:Os10g0513200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NOD26 LIKE INTRINSIC PROTEIN 3;1 description:Boric acid channel, Regulation of boron distribution (Os10t0513200-01)
Sequence

ATGGAGATGGCGGCGCCGAACGGGGGCGGCGCGGCGGGGATGTCGTCGCCGGTGAACGGG
GCGTCGGCGCCGGCGACGCCGGGGACGCCGGCGCCGCTGTTCGCGGGGCCGCGGGTGGAC
TCGCTGTCGTACGAGCGCAAGTCGATGCCGCGGTGCAAGTGCCTGCCGGCGGCGGTGGCG
GAGGCGTGGGCGCCGTCGGCGCACGGCTGCGTCGTGGAGATCCCGGCGCCGGACGTCTCG
CTCACCCGCAAGCTTGGAGCGGAGTTCGTGGGGACGTTCATCCTCATCTTCTTCGCGACG
GCGGCGCCGATCGTGAACCAGAAGTACGGCGGCGCGATCTCGCCGTTCGGGAACGCGGCG
TGCGCGGGGCTCGCCGTGACGACCATCATCCTGTCGACGGGGCACATCTCCGGCGCCCAC
CTCAACCCGTCGCTCACCATCGCCTTCGCCGCGCTCCGCCACTTCCCGTGGCTGCAGGTC
CCGGCGTACGTCGCCGTCCAGGTGCTCGGCTCCATCTGCGCCGGCTTCGCCCTCAAGGGC
GTCTTCCACCCCTTCCTCTCCGGCGGCGTCACCGTCCCCGACCCCACCATCTCCACCGCC
CAGGCCTTCTTCACCGAGTTCATCATCACCTTCAACCTCCTCTTCGTCGTCACCGCCGTC
GCCACCGACACCCGCGCCGTCGGCGAGCTCGCCGGCATCGCCGTCGGCGCCGCCGTCACC
CTCAACATCCTCATCGCCGGGCCGACGACAGGAGGGTCGATGAACCCGGTGAGGACGCTG
GGGCCGGCGGTGGCGGCGGGCAACTACCGGCAGCTGTGGATATACCTGATCGCGCCGACG
CTGGGCGCGGTCGCCGGCGCCGGCGTGTACACGGCGGTGAAGCTCCGCGACGAGAACGGC
GAGACCCCGCGCCCCCAGCGCAGCTTCCGCCGCTGA

Peptide Sequence

PEP ID

Os10t0513200-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:19778055:19785158:-1 gene:Os10g0513200 transcript:Os10t0513200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NOD26 LIKE INTRINSIC PROTEIN 3;1 description:Boric acid channel, Regulation of boron distribution (Os10t0513200-01)
Sequence

MEMAAPNGGGAAGMSSPVNGASAPATPGTPAPLFAGPRVDSLSYERKSMPRCKCLPAAVA
EAWAPSAHGCVVEIPAPDVSLTRKLGAEFVGTFILIFFATAAPIVNQKYGGAISPFGNAA
CAGLAVTTIILSTGHISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKG
VFHPFLSGGVTVPDPTISTAQAFFTEFIITFNLLFVVTAVATDTRAVGELAGIAVGAAVT
LNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLIAPTLGAVAGAGVYTAVKLRDENG
ETPRPQRSFRR

Transcript Sequence

Transcript ID

Os10t0513200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:19778055:19785158:-1 gene:Os10g0513200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NOD26 LIKE INTRINSIC PROTEIN 3;1 description:Boric acid channel, Regulation of boron distribution (Os10t0513200-01)
Sequence

GGGAGATACCTCGCTAGCAGTGGACGCCATTGACCTCGATCCATCGCCTCATGTGCGCAC
ACTACGCCTATATACAGTCGCACCACACACAGCTACCTCCACCACCCAACCCCCCAAACA
CCTAGCTCACTGCATCTTCTTCCTCCTCCTCCTGATCAAATTAATCATCGTCTCCTCCAT
TGCATTCTTGCATCCATCCATCTAGCTAGTTAGTGTTGTTCTTGTTCGTGTTCTTGTTCT
TGATGTGCATTGATCTTTCTTCTCTATTGATCTAATTGTTCTTAGATTGAGAGTGAAGTT
GTGAGAGAGCTGGACACCATTTCTCTCATCAATATCCCTTAGCCAAACCTTGAGAAAAGC
CTGTGAAGCATGTAAGAACACACCAGTTTGTTCCATCCAAACCCAACCCAAAAAAGCACC
AAAAAAAAGGTCATCAGTTCCAAGTCCCAAAAGCATTGTTCTTTCATAACTAGGCATCTC
GGTTAATTAGGGTGGATATTCCTCCACTAATCCCTTAGCGAAAAATCTACAAAAACCACT
AGATCATGTAATTTTCGGCGAAATCATTCCACCCCCAGCTGAAGAAAAAAAAACAAAAAA
AATATAGGCCAAGAGAATCATATTCCAGCATGCATCGTTAGCTAGTAGCCATCATCTCAG
TCGCAGTCCGGTAGTAATACTGGACACAATCCTCCCATTGCTGTAGCATTTACCTCTGCA
AAAGCCATCAAATCATGTAATTAGTAGCTAAAAACCCATCCTATTTCTACCTCATCATTC
GCCTGAAAAGAGAAAAAAACAAGAACAAAAAAAAAAAGAAGTTGCAAGAAGAGGAGAGCA
AGAAAGAGTTGATATATTAATGGAGATGGCGGCGCCGAACGGGGGCGGCGCGGCGGGGAT
GTCGTCGCCGGTGAACGGGGCGTCGGCGCCGGCGACGCCGGGGACGCCGGCGCCGCTGTT
CGCGGGGCCGCGGGTGGACTCGCTGTCGTACGAGCGCAAGTCGATGCCGCGGTGCAAGTG
CCTGCCGGCGGCGGTGGCGGAGGCGTGGGCGCCGTCGGCGCACGGCTGCGTCGTGGAGAT
CCCGGCGCCGGACGTCTCGCTCACCCGCAAGCTTGGAGCGGAGTTCGTGGGGACGTTCAT
CCTCATCTTCTTCGCGACGGCGGCGCCGATCGTGAACCAGAAGTACGGCGGCGCGATCTC
GCCGTTCGGGAACGCGGCGTGCGCGGGGCTCGCCGTGACGACCATCATCCTGTCGACGGG
GCACATCTCCGGCGCCCACCTCAACCCGTCGCTCACCATCGCCTTCGCCGCGCTCCGCCA
CTTCCCGTGGCTGCAGGTCCCGGCGTACGTCGCCGTCCAGGTGCTCGGCTCCATCTGCGC
CGGCTTCGCCCTCAAGGGCGTCTTCCACCCCTTCCTCTCCGGCGGCGTCACCGTCCCCGA
CCCCACCATCTCCACCGCCCAGGCCTTCTTCACCGAGTTCATCATCACCTTCAACCTCCT
CTTCGTCGTCACCGCCGTCGCCACCGACACCCGCGCCGTCGGCGAGCTCGCCGGCATCGC
CGTCGGCGCCGCCGTCACCCTCAACATCCTCATCGCCGGGCCGACGACAGGAGGGTCGAT
GAACCCGGTGAGGACGCTGGGGCCGGCGGTGGCGGCGGGCAACTACCGGCAGCTGTGGAT
ATACCTGATCGCGCCGACGCTGGGCGCGGTCGCCGGCGCCGGCGTGTACACGGCGGTGAA
GCTCCGCGACGAGAACGGCGAGACCCCGCGCCCCCAGCGCAGCTTCCGCCGCTGATCCAA
ATCATATCCAAATCCATATCCATAAAAACAAATTATTATACACGACGTAGTTAACCTGAA
CAAATTATATGGCTTCCAATTAAAAAAAAATCAGTCGTGTCATCCTTGGGCCTTGTTCCA
CATGGGCCGAACACCAAGAGAAATCCGCGTGAATATGGGCCGTGATTTTGGTTGAAAATT
TTCGGTCCATTCACGTAGATGGGCCGGGTTTGAGGCCTTTTCAAATGAGACCTTGGGGGC
GTGTAATAAACCCCGTTTTGCTTCGTCCAGAACGGCAGAGTATAATAGTTCGAGTTGTGT
GTGATGTGTCAGAACTCAGAATAAAAATGCACGCCGATGCACCGGGGTGATGGGCATCTT
GCTGTGCGAATGGTGTAAGGTTTTATTTAATTTCCTATTTGACAAATTGTGTAATTTTCC
CTGTTCCGACATTGATAATTGAGAAAAATTGTCCCAAAAACTGCGTAGCCAACTGTCAGT
GAGACGTTAACAAAA