Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0512400-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:19728265:19735008:-1 gene:Os10g0512400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coniferaldehyde 5-hydroxylase 1, ferulate 5-hydroxylase 1 description:Coniferaldehyde 5-hydroxylase, Lignin biosynthesis (Os10t0512400-01)
Sequence	ATGGCGGACATGGTGAAGTTCACCATGGAGTGGCTTCAGGATCCTCTGAGCCTGGCGATC GTCGTCACGGTGGCCGTCCTAATCATGCGGATGCAGCGGCGGCGCGCGGCGCCGTTCCCG CCGGGGCCGAAGCCGCTGCCGATCGTCGGCAACATGGCGATGATGGACCAGCTGACGCAC CGCGGCCTGGCAGCGCTGGCGAAGGAGTACGGCGGCCTGATGCACCTCCGGCTCGGCCGG CTCCACGCGTTCGCCGTGTCGACGCCGGAGTACGCGCGCGAGGTGCTCCAGGCGCAGGAC GGCGCGTTCTCGAACAGGCCGGCGACCACGGCGATCGCCTACCTCACCTACGACCGCGCG GACATGGCGTTCGCGCACTACGGGCCCTTCTGGCGCCAGATGAGGAAGCTGTGCGTGGTG AAGCTCTTCAGCCGGCGCCGCGCCGAGACGTGGCTCGCCGTGCGCGACGAGTCCGCGGCG CTCGTGCGCGCCGTGGCGGCGTCGCGCGGCGAGGCCGCCGTCAACCTCGGCGAGCTCATC TTCAACCTCACCAAGAACGTCATCTTCCGCGCCGCGTTCGGCACGCGCGACGGCGAGGGG CACGACGAGTTCATCGCCATCCTCCAGGAGTTCTCCAAGCTGTTCGGCGCGTTCAACATC GGCGACTTCATCCCCTGGCTCAGCTGGGCGGACACCAACGGCATCAACGCCCGCCTCGTC GCGGCGCGCACCGCGCTCGACAGGTTCATCGACAAGATCATCGACGAGCACATGGAGCGC GGCAAGAACCCCGACGACGCCGACGCCGACATGGTCGACGACATGCTCGCGTTCCTCGCC GAGGCCAAGCCGCACGCCGGCAAGGCCGCCGCCGCCGCCGCCGGCGCCGGCGACGGGGCC GACGACCTGCAGAACACGCTCCGCCTCACCCGCGACAACATCAAGGCCATCATCATGGAC GTGATGTTCGGGGGGACGGAGACGGTGGCGTCGGCGATCGAGTGGGCGATGGCGGAGATG ATGCACAGCCCCGACGACCTCCGCCGCGTGCAGGAGGAGCTCGCCGCCGTGGTGGGCCTC GGCCGGGACGTCGCCGAGTCCGACCTCGACAAGCTCCCCTTCCTCCGCTGCGTCATCAAG GAGACGCTCCGCCTCCACCCGCCCATCCCCATCCTCCTCCACGAGACCGCCGCCGACTGC CTCGTCGCCGGCTACTCCGTCCCCAGGGGCTCCCGCGTCATGGTCAACGTGTGGGCCATC GCCCGCGACCGCGCCGCCTGGGGCCCCGACGCCGACGCGTTCCGCCCCTCGCGGTTCGCC GCCGGCGCCGCCGCCGAGGGGCTCGACTTCAGGGGCGGCTGCTTCGAGTTCCTCCCCTTC GGCTCCGGCCGCCGCTCGTGCCCGGGCATGGCGCTGGGGCTCTACGCGCTCGAGCTCGCC GTCGCGCGGCTCGCCCACGGCTTCAACTGGTCGCTCCCCGACGGGATGAAGCCGTCCGAG CTCGACATGTCCGACATCTTCGGCCTCACCGCGCCGCGCGCCACCCGCCTCTCCGCCGTC GCCACGCCCCGGCTCACCTGCCCCTTGTACTGA

Peptide Sequence

PEP ID	Os10t0512400-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:19728265:19735008:-1 gene:Os10g0512400 transcript:Os10t0512400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coniferaldehyde 5-hydroxylase 1, ferulate 5-hydroxylase 1 description:Coniferaldehyde 5-hydroxylase, Lignin biosynthesis (Os10t0512400-01)
Sequence	MADMVKFTMEWLQDPLSLAIVVTVAVLIMRMQRRRAAPFPPGPKPLPIVGNMAMMDQLTH RGLAALAKEYGGLMHLRLGRLHAFAVSTPEYAREVLQAQDGAFSNRPATTAIAYLTYDRA DMAFAHYGPFWRQMRKLCVVKLFSRRRAETWLAVRDESAALVRAVAASRGEAAVNLGELI FNLTKNVIFRAAFGTRDGEGHDEFIAILQEFSKLFGAFNIGDFIPWLSWADTNGINARLV AARTALDRFIDKIIDEHMERGKNPDDADADMVDDMLAFLAEAKPHAGKAAAAAAGAGDGA DDLQNTLRLTRDNIKAIIMDVMFGGTETVASAIEWAMAEMMHSPDDLRRVQEELAAVVGL GRDVAESDLDKLPFLRCVIKETLRLHPPIPILLHETAADCLVAGYSVPRGSRVMVNVWAI ARDRAAWGPDADAFRPSRFAAGAAAEGLDFRGGCFEFLPFGSGRRSCPGMALGLYALELA VARLAHGFNWSLPDGMKPSELDMSDIFGLTAPRATRLSAVATPRLTCPLY

Transcript Sequence

Transcript ID	Os10t0512400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:19728265:19735008:-1 gene:Os10g0512400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:coniferaldehyde 5-hydroxylase 1, ferulate 5-hydroxylase 1 description:Coniferaldehyde 5-hydroxylase, Lignin biosynthesis (Os10t0512400-01)
Sequence	AGCTCTACACCAAGAGCGCTTATAAACATAAAAAACATCTCAAACACAACCCAAAATAGG GCCAAAATTCTAGAATATTATTTTTGTTTTGAAAGGAATTTAAGTTTGTGTGGTGTGTCA TCCATGGCGGACATGGTGAAGTTCACCATGGAGTGGCTTCAGGATCCTCTGAGCCTGGCG ATCGTCGTCACGGTGGCCGTCCTAATCATGCGGATGCAGCGGCGGCGCGCGGCGCCGTTC CCGCCGGGGCCGAAGCCGCTGCCGATCGTCGGCAACATGGCGATGATGGACCAGCTGACG CACCGCGGCCTGGCAGCGCTGGCGAAGGAGTACGGCGGCCTGATGCACCTCCGGCTCGGC CGGCTCCACGCGTTCGCCGTGTCGACGCCGGAGTACGCGCGCGAGGTGCTCCAGGCGCAG GACGGCGCGTTCTCGAACAGGCCGGCGACCACGGCGATCGCCTACCTCACCTACGACCGC GCGGACATGGCGTTCGCGCACTACGGGCCCTTCTGGCGCCAGATGAGGAAGCTGTGCGTG GTGAAGCTCTTCAGCCGGCGCCGCGCCGAGACGTGGCTCGCCGTGCGCGACGAGTCCGCG GCGCTCGTGCGCGCCGTGGCGGCGTCGCGCGGCGAGGCCGCCGTCAACCTCGGCGAGCTC ATCTTCAACCTCACCAAGAACGTCATCTTCCGCGCCGCGTTCGGCACGCGCGACGGCGAG GGGCACGACGAGTTCATCGCCATCCTCCAGGAGTTCTCCAAGCTGTTCGGCGCGTTCAAC ATCGGCGACTTCATCCCCTGGCTCAGCTGGGCGGACACCAACGGCATCAACGCCCGCCTC GTCGCGGCGCGCACCGCGCTCGACAGGTTCATCGACAAGATCATCGACGAGCACATGGAG CGCGGCAAGAACCCCGACGACGCCGACGCCGACATGGTCGACGACATGCTCGCGTTCCTC GCCGAGGCCAAGCCGCACGCCGGCAAGGCCGCCGCCGCCGCCGCCGGCGCCGGCGACGGG GCCGACGACCTGCAGAACACGCTCCGCCTCACCCGCGACAACATCAAGGCCATCATCATG GACGTGATGTTCGGGGGGACGGAGACGGTGGCGTCGGCGATCGAGTGGGCGATGGCGGAG ATGATGCACAGCCCCGACGACCTCCGCCGCGTGCAGGAGGAGCTCGCCGCCGTGGTGGGC CTCGGCCGGGACGTCGCCGAGTCCGACCTCGACAAGCTCCCCTTCCTCCGCTGCGTCATC AAGGAGACGCTCCGCCTCCACCCGCCCATCCCCATCCTCCTCCACGAGACCGCCGCCGAC TGCCTCGTCGCCGGCTACTCCGTCCCCAGGGGCTCCCGCGTCATGGTCAACGTGTGGGCC ATCGCCCGCGACCGCGCCGCCTGGGGCCCCGACGCCGACGCGTTCCGCCCCTCGCGGTTC GCCGCCGGCGCCGCCGCCGAGGGGCTCGACTTCAGGGGCGGCTGCTTCGAGTTCCTCCCC TTCGGCTCCGGCCGCCGCTCGTGCCCGGGCATGGCGCTGGGGCTCTACGCGCTCGAGCTC GCCGTCGCGCGGCTCGCCCACGGCTTCAACTGGTCGCTCCCCGACGGGATGAAGCCGTCC GAGCTCGACATGTCCGACATCTTCGGCCTCACCGCGCCGCGCGCCACCCGCCTCTCCGCC GTCGCCACGCCCCGGCTCACCTGCCCCTTGTACTGACGGCGGCCGGCGACCGCGGCGGCG TACGGCAAGAATGGTTTGCAGGTGATGGTGTTAAAAGTTCAGACGCGTGTGGCGCCATTG GAGGAGCTTGGTGTGGCTAGCTTAGCTTCCTCTGGGCCTTTTTTTTTTTGCTGGTTTAAT TTTCTTTTTTTTTTCTCCTTTGTAATTTAATCCATGTCTCCAGAACAATAAGTGGATTAG TAGGGTATAATTAAGGGTGACAGTGTGATATATAGACTATAAGATCAAAGTTGTAAATTT GGTGTCCGGTGTGCCTGTCCACATAAGCACAGCCTCTGAATTTTCTTGTAAAACTTTGTC ATGAAAATTGAGAAAGAAAACACCTCGCTTTCCACGCGTACGCTTACC