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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0510500-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:19631259:19632262:-1 gene:Os10g0510500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 56 description:Auxin responsive SAUR protein family protein. (Os10t0510500-01)
Sequence

ATGCACGGGAAGCATCAGCATCAGCAGCAGCAGCAGCAGCAGGGGGGGATGGTGGTGGTG
GCGCCGAAGGGGTGCGTGACGGTGAGGGTGGGGGCGGAGGGGGAGGAGCAGCGGCGGTTC
GCCGTGCCGCTCGCCCACCTCAAGCACCCGCTCTTCGGGGCGCTGCTCGAGGAGGCCGAG
CGCGAGTACGGCTTCGCGCAGCGGGGCGCCATCGCCATCCCCTGCCGCGTCGACCGCTTC
GTCCACGTCGAGCACCTCATCGTCCAGGACCTCCACGGCGCCGCCGCCTCCCACCTCCTC
GACCTCGACTCCTCCTCCCACCACCACACCCAGATCCACCTCCACCTCCCCCGCTTCGCC
GGTTGCTTCCGCGCCTGA

Peptide Sequence

PEP ID

Os10t0510500-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:19631259:19632262:-1 gene:Os10g0510500 transcript:Os10t0510500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 56 description:Auxin responsive SAUR protein family protein. (Os10t0510500-01)
Sequence

MHGKHQHQQQQQQQGGMVVVAPKGCVTVRVGAEGEEQRRFAVPLAHLKHPLFGALLEEAE
REYGFAQRGAIAIPCRVDRFVHVEHLIVQDLHGAAASHLLDLDSSSHHHTQIHLHLPRFA
GCFRA

Transcript Sequence

Transcript ID

Os10t0510500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:19631259:19632262:-1 gene:Os10g0510500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SMALL AUXIN-UP RNA 56 description:Auxin responsive SAUR protein family protein. (Os10t0510500-01)
Sequence

GGAGACCCCTCCTCCCCTCGGCAACGTAACACAAGAGAAGAAGAGATCGCCATGTCCAAC
GTGCCCACCTCCCTCCGCGACTCCTCCCTCACCGTCTTCCGCCTCGCCATCTCCAGCTCC
GACCCCTGGCCCTTCTCCCTTTAACCCCATCAAACGCTTCTTCCTCTTCCAAGAAGATCA
CAAGCTTCTTCGTGTTCTTGTTCTTCTTCGGATCACTCGGTTGGTTTCTTGGTTTCTTGG
TTTCTTGGATTGTTGCGAGATGCACGGGAAGCATCAGCATCAGCAGCAGCAGCAGCAGCA
GGGGGGGATGGTGGTGGTGGCGCCGAAGGGGTGCGTGACGGTGAGGGTGGGGGCGGAGGG
GGAGGAGCAGCGGCGGTTCGCCGTGCCGCTCGCCCACCTCAAGCACCCGCTCTTCGGGGC
GCTGCTCGAGGAGGCCGAGCGCGAGTACGGCTTCGCGCAGCGGGGCGCCATCGCCATCCC
CTGCCGCGTCGACCGCTTCGTCCACGTCGAGCACCTCATCGTCCAGGACCTCCACGGCGC
CGCCGCCTCCCACCTCCTCGACCTCGACTCCTCCTCCCACCACCACACCCAGATCCACCT
CCACCTCCCCCGCTTCGCCGGTTGCTTCCGCGCCTGATCCTTCCATCATCTCCATGGATG
CATCGCCATGGCGGTGGAGCGGAGCTCCCAGATTGCTCTTCTTCTTCTTCTTCAGGGTTG
GTTGGTCGATTAATTACTTAGTTTAGCTAGTTTTTTGGTTTCCTTTTGCTTCGTCCTCCG
ATCTCTCGGTTTGTTGGGGATGGATTTCGATTGGGTTTGTGGACGGGAGAATCGGAGGAC
GGATTCGATGCTGATGACGACGAAAAATTGAGATCGATCTCAAAAGTGTAAAGACAGAGT
AATTCTTCTTAGTAGCTTTATTCTAGTTTTATTTTTTTTATCTTTTTTCTTTGCTTGTAC
ATCCACTTCTTGAAACACATCAATAATACAGTATACTTTGATCG