Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0508700-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:19530118:19532281:-1 gene:Os10g0508700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os10t0508700-01)
Sequence	ATGGCACGTAGCCTCTCGTTGCTGCTACTCCTCGTCGCGTGCTTCCTCGTCGCCGGCGCC ACCGCGGCTCGCCCGGCGCCGTCGACGAGCGGCGCCGCCGCCATCAGCAGCTTCGTGAGG TCGTGGTGCGCGGGGACGAAGTACCCCGCCCTGTGCGACGCGACGCTGGCGCCGTACTCG GCGGCGGTGGGGGCGAGCCCGGCGAAGCTGGCGTGGGCGGCGCTGACGGTCACCCTCAGC GCCGCCCGCAACGCGACGTCGGCGGTGAGGTCCATCGCGGCGAGGTCGTCGTCGTCCCAT CTCCCGCCCGTGGCGGCGGAGGCGGCCGGGGACTGCGCCAGCGAGCTCGGCGACGGCGTG GACGCGCTGCGGCGGTGCGTGGACGCCATGGCCCGCGTCGCCGTCGGCGAGGAGTCGTCG TCGACGGCGGCGGCGGCGAGGAGGAAGGTGAGGTTCGAGGTGGACAACGTGCGGACGTGG GCCAGCGCGGCGCTCACCGACGACAACATGTGCATGGAAGGGTTCAAGGGGGAGGCCGCC GGCGGCGGCGGCGCCAGGGAGGCCGTCCGCGGCCACATCATGGGCCTCCTCCACCTCACC GCAAACGCGCTCGGCATCCTCAACGCCATGGCCAAGCAAATATAA

Peptide Sequence

PEP ID	Os10t0508700-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:19530118:19532281:-1 gene:Os10g0508700 transcript:Os10t0508700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os10t0508700-01)
Sequence	MARSLSLLLLLVACFLVAGATAARPAPSTSGAAAISSFVRSWCAGTKYPALCDATLAPYS AAVGASPAKLAWAALTVTLSAARNATSAVRSIAARSSSSHLPPVAAEAAGDCASELGDGV DALRRCVDAMARVAVGEESSSTAAAARRKVRFEVDNVRTWASAALTDDNMCMEGFKGEAA GGGGAREAVRGHIMGLLHLTANALGILNAMAKQI

Transcript Sequence

Transcript ID	Os10t0508700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:19530118:19532281:-1 gene:Os10g0508700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os10t0508700-01)
Sequence	ACGCCAACACACACGCACTCGTACACATATACTGCAAATTAAAAAGCTAGCTTAGCCATG GCACGTAGCCTCTCGTTGCTGCTACTCCTCGTCGCGTGCTTCCTCGTCGCCGGCGCCACC GCGGCTCGCCCGGCGCCGTCGACGAGCGGCGCCGCCGCCATCAGCAGCTTCGTGAGGTCG TGGTGCGCGGGGACGAAGTACCCCGCCCTGTGCGACGCGACGCTGGCGCCGTACTCGGCG GCGGTGGGGGCGAGCCCGGCGAAGCTGGCGTGGGCGGCGCTGACGGTCACCCTCAGCGCC GCCCGCAACGCGACGTCGGCGGTGAGGTCCATCGCGGCGAGGTCGTCGTCGTCCCATCTC CCGCCCGTGGCGGCGGAGGCGGCCGGGGACTGCGCCAGCGAGCTCGGCGACGGCGTGGAC GCGCTGCGGCGGTGCGTGGACGCCATGGCCCGCGTCGCCGTCGGCGAGGAGTCGTCGTCG ACGGCGGCGGCGGCGAGGAGGAAGGTGAGGTTCGAGGTGGACAACGTGCGGACGTGGGCC AGCGCGGCGCTCACCGACGACAACATGTGCATGGAAGGGTTCAAGGGGGAGGCCGCCGGC GGCGGCGGCGCCAGGGAGGCCGTCCGCGGCCACATCATGGGCCTCCTCCACCTCACCGCA AACGCGCTCGGCATCCTCAACGCCATGGCCAAGCAAATATAACTCCTCCCTAGCTAGTAG ATAACTCAGTGACATACATACCCATGTACGTACGTCGAGCACAAGCACAGCACAGCAACA GGGTGAGAAAAGATCTCTTGATGTGTTCAACGAAAAGAACAAAAACGTCTCATGTATCAG GCACAAATATCTGCAGAGTGCATAAGCAAAGCACAGACTGAAGTTGATTTGGTTCTTAGG ACAATTAATGTGAAGGGCTGAAGGCAATAATGCAAGTCGATCTACTGCTAAACCACAGGA GCACAACACAATAGATAGACAAAGTTAGTTATGAGTCACAGTCAGAAATCAGAATAATGC ATGCCAACATGCATGGTAGATTGGTAGTACACTCAAAGTTGTCCATGGAATTGTTGCCAT CCTTTGTGTAATAGTGTAGGTAAGGCTTAAACTGATCATTTGTGTGCACACTGGTGCTGC ATTGTACTTGACTGTTAGTACTTAGTAGAGTCTATTACCTTCAGCTGTCTTTGCTGAGAA CATCAGGCCCCAGAGCGAGTTCAGCAATC