Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0507600-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:19415610:19418684:-1 gene:Os10g0507600 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os10t0507600-01)
Sequence	ATGGCCGCCTCCTGCGACCTCGTCGACGTCGATCCCCCCGAGCTCCAGTTCCCCTTCGAG CTCGACAAGCAGATCTCCTGCCCCCTCAGGATCGCCAACAAGACCGAGAGGACGGTCGCG TTTAAGGTTAAGACGACGAGCCCCAAGAAGTACTGCGTGCGCCCCAATAATGGCGTCGTG CGGCCGCGATCCGCCTCCGTCGTTGTAGTCACGATGCAAGCGCAGATTGTGGCGCCTCCG GACTTGCAGTGCAAGGACAAGTTCTTGGTGCAGAGCGTGGTCGTCGACGATGGCTTGTCA GCTAAGGACATCACCTCTCAAATGTTCCTGAGAGATGAGAACAACATGGTTGAGGAGGTG AAGCTTAAGGTTTCTTATGTGATGCCACCTGAACCAGCGATGGAGATTGCAGAGGAGTCT GATATTCCAAAGAGAATTTTGGTGCCTATGCAGCGGATTTTGGATAATGGGAGGAGTGGT TCGGAGCTGTCAAGTGGTAATGTCTCATTGAGATCAGCTGAGATGGGGACAGAGTTGGGA TCACCTCTTGGACGATTTGTGAGAAATGAGGATATGCTGAAGACTGCAAGTCCTGTTGTT GAAACAAGAGTACATGCAGGACCTGATGAACAATACCTCGAGCTGTCCGCTTTGGTTGCA AAATTGACCGAAGAAAAGAAGTCTGCACTTGAGCAAAATAGGAAACTTCGAGAGGAGCTG TGA

Peptide Sequence

PEP ID	Os10t0507600-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:19415610:19418684:-1 gene:Os10g0507600 transcript:Os10t0507600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os10t0507600-01)
Sequence	MAASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGVV RPRSASVVVVTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEV KLKVSYVMPPEPAMEIAEESDIPKRILVPMQRILDNGRSGSELSSGNVSLRSAEMGTELG SPLGRFVRNEDMLKTASPVVETRVHAGPDEQYLELSALVAKLTEEKKSALEQNRKLREEL

Transcript Sequence

Transcript ID	Os10t0507600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:19415610:19418684:-1 gene:Os10g0507600 gene_biotype:protein_coding transcript_biotype:protein_coding description:PapD-like domain containing protein. (Os10t0507600-01)
Sequence	ATGGCCGCCTCCTGCGACCTCGTCGACGTCGATCCCCCCGAGCTCCAGTTCCCCTTCGAG CTCGACAAGCAGATCTCCTGCCCCCTCAGGATCGCCAACAAGACCGAGAGGACGGTCGCG TTTAAGGTTAAGACGACGAGCCCCAAGAAGTACTGCGTGCGCCCCAATAATGGCGTCGTG CGGCCGCGATCCGCCTCCGTCGTTGTAGTCACGATGCAAGCGCAGATTGTGGCGCCTCCG GACTTGCAGTGCAAGGACAAGTTCTTGGTGCAGAGCGTGGTCGTCGACGATGGCTTGTCA GCTAAGGACATCACCTCTCAAATGTTCCTGAGAGATGAGAACAACATGGTTGAGGAGGTG AAGCTTAAGGTTTCTTATGTGATGCCACCTGAACCAGCGATGGAGATTGCAGAGGAGTCT GATATTCCAAAGAGAATTTTGGTGCCTATGCAGCGGATTTTGGATAATGGGAGGAGTGGT TCGGAGCTGTCAAGTGGTAATGTCTCATTGAGATCAGCTGAGATGGGGACAGAGTTGGGA TCACCTCTTGGACGATTTGTGAGAAATGAGGATATGCTGAAGACTGCAAGTCCTGTTGTT GAAACAAGAGTACATGCAGGACCTGATGAACAATACCTCGAGCTGTCCGCTTTGGTTGCA AAATTGACCGAAGAAAAGAAGTCTGCACTTGAGCAAAATAGGAAACTTCGAGAGGAGCTG TGATCATCTTTGTCAACCCCATGTTGGTGGGCATAAATATGCAGGAGCTTGCAAGGCGTC AAGCCAGTCAACATCAAGGAGGCTTCTCGCTGGCATTCGTACTGGTGATTGGGCTACTTA GCATTATTCTGGGTTGTCTTGTAAAGAAATGAGAAATCTCATATTCCAGTCTAGTCAGAT AATTCTACAGTAAATAAAAAGGTGACGTCGTGGGGATGCTTAGTTTTGTTGGTCAGCTGC CAAAGGATGCAGAAAAACAAATGTACCAAGTTTGGTGAGGTTTACTGTTTACAAGTGTCC GATGGACAAAAAAGGGTGGTGTTTGTGTGGCGTCGTAGTGGTAATCTAGCTTGATCCATG ATGTATTTTTAAACTAATCATTGGAAAGTTACTCCTATT