Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0507500-00
CDS Infomation

cds chromosome:IRGSP-1.0:10:19413262:19414196:1 gene:Os10g0507500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0507500-00)
Sequence

ATGGGAGGCCACGGCGGGCTGAACATCCTGCCGCAGAAGCGGTGGAACGTCTACAACTTT
GACAACCGCGAGAAGGTCCGCCGCGACGAGGCCGAGGCGGCCCGGGAAGAGCAGCTCCAG
CGCGAGGCCGTCCGCCGCCGCGACTCCGACCTCCGCCTCGCCGCGCTCCGCCGCAACCGC
GGCCTCCAGTCCGCCGACGCGGCGCCCCTCCCTCCCCGGCCGCCCACCTACGCCGCGGAG
CAGTGCCCCGCGGATCCGGCCGACCCGTCCCCCGCCGCCGACGACTCAGACGGCGGCCAC
ATCAACCTCTTCTCCGCCCGCGGCGGCGGCGGTGGTGCAACCGACTTCGCCGTGCTCGCC
TCCGCCGACGGTGGGAGGGGCGCCGCCAGGGAGCGGGAGCCTCCCGCGAACCCTAACCCT
AAGAAGCGGAAGAGGAAGGAGGAGGAGGTGAGGGCGGTGGGGCCCGACGAGGAGAAGTAC
AGGCTCGGGTATGGCCTCGCCGGGAAGGGCGTGGCGGCGCCGTGGTACATGTCCAAGCCG
TCGGCTTCATCCTCCATGGAGAGGAAGGATCGCGAGGCGGGAGAAGGGAGTGTGGGGAAG
AAGAATGGTGGGAAGAAGAGCATTGAGGAGCTTAGGGAGGAGAGGAGGAAGAGGGAGGCC
AAGGAGAAGGAGCGAGAGCGAGCGCTGCTCGGCGTTCCATCGAGGAAGGAGAAGTATTCG
GAACGGGGACGATCGTCGAGATGGGCACGGTGA

Peptide Sequence

PEP ID

Os10t0507500-00
PEP Infomation

pep chromosome:IRGSP-1.0:10:19413262:19414196:1 gene:Os10g0507500 transcript:Os10t0507500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0507500-00)
Sequence

MGGHGGLNILPQKRWNVYNFDNREKVRRDEAEAAREEQLQREAVRRRDSDLRLAALRRNR
GLQSADAAPLPPRPPTYAAEQCPADPADPSPAADDSDGGHINLFSARGGGGGATDFAVLA
SADGGRGAAREREPPANPNPKKRKRKEEEVRAVGPDEEKYRLGYGLAGKGVAAPWYMSKP
SASSSMERKDREAGEGSVGKKNGGKKSIEELREERRKREAKEKERERALLGVPSRKEKYS
ERGRSSRWAR

Transcript Sequence

Transcript ID

Os10t0507500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:19413262:19414196:1 gene:Os10g0507500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0507500-00)
Sequence

AGGAGCCATGGGAGGCCACGGCGGGCTGAACATCCTGCCGCAGAAGCGGTGGAACGTCTA
CAACTTTGACAACCGCGAGAAGGTCCGCCGCGACGAGGCCGAGGCGGCCCGGGAAGAGCA
GCTCCAGCGCGAGGCCGTCCGCCGCCGCGACTCCGACCTCCGCCTCGCCGCGCTCCGCCG
CAACCGCGGCCTCCAGTCCGCCGACGCGGCGCCCCTCCCTCCCCGGCCGCCCACCTACGC
CGCGGAGCAGTGCCCCGCGGATCCGGCCGACCCGTCCCCCGCCGCCGACGACTCAGACGG
CGGCCACATCAACCTCTTCTCCGCCCGCGGCGGCGGCGGTGGTGCAACCGACTTCGCCGT
GCTCGCCTCCGCCGACGGTGGGAGGGGCGCCGCCAGGGAGCGGGAGCCTCCCGCGAACCC
TAACCCTAAGAAGCGGAAGAGGAAGGAGGAGGAGGTGAGGGCGGTGGGGCCCGACGAGGA
GAAGTACAGGCTCGGGTATGGCCTCGCCGGGAAGGGCGTGGCGGCGCCGTGGTACATGTC
CAAGCCGTCGGCTTCATCCTCCATGGAGAGGAAGGATCGCGAGGCGGGAGAAGGGAGTGT
GGGGAAGAAGAATGGTGGGAAGAAGAGCATTGAGGAGCTTAGGGAGGAGAGGAGGAAGAG
GGAGGCCAAGGAGAAGGAGCGAGAGCGAGCGCTGCTCGGCGTTCCATCGAGGAAGGAGAA
GTATTCGGAACGGGGACGATCGTCGAGATGGGCACGGTGATGTGGGGATGCACTTAATAT
ATTTGTGCAGGCTCTTCGAAAGATGTTGATTTGAAGAACAATGTGAGGA