Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0506000-00
CDS Infomation	cds chromosome:IRGSP-1.0:10:19350042:19351774:1 gene:Os10g0506000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat motif containing gene 12, PPR motif-containing gene 12 description:Pentatricopeptide repeat containing protein. (Os10t0506000-00)
Sequence	ATGAACCCGGGCGCTCGCCCGCCCGCGTTGCAGACGCTCTCCGCCCGCCTCTGGCCGCGC AGGCGGCTCTGCGGAGTCCACGCGGGGAGCCGGAGCGGGGGCGAGGGGCCTGGAGCTAGG GAGAGTGGTGGTGGTGACGTTCGCATTGGAAGGGGGGAGGAGGAGGAGGAGGGAGGGTTG GATGGCGGACGCGTCCCGCAGGAAGTGCTGCTCCGGCTGCCGACGCCGCCCGGCCGGGCT GAGACCGACGACGATGATGGCGAAAACTTGTCCCCTGGCGCGGGGTCCGGTTCCAGGAGG AGGTTCTTTGAGGAGCTGAGGTTGAAGGCGGATAGGATTGTCAAGATCCTGCTTCAGGAT GGCCCGGGGTTCAACACCCGCCAGGCGCTCGACGAAATGCGCCCGAGGGTGTCCAATGCC CTTGTGAGGGAAGTGCTGCTCAAATTTGTTGTCTCGATCGATGGCGTGAACCGCGCTAGG TACCCGAGGCTGGCTTACAAGTTCTTCCTGTGGGCGGAGGAACAGGAGGGGTACCGGCAC GGCACGAGCATGTACAACCTCATCTTGAAGATCTTTGCGGAGTGTGGGGAGCTCAAGGCG ATGTGGCGGCTGCTTGAGGATATGACAGATAAGGGGCTGCCTGTGTCTTCCCGGACGTTC CACCTCTTGGTATGCACATCGGGGCGGGCTGGATTGAGGCGGAGGCTGGTGGAGAGGTTC ATCAAGTCAAGTAATTTCAATTATCGCCCATTTAGGAATTCATTCAATGCGATACTGCAC ACTCTGCTGACCATAGAGCAGTATTCGTTGATTGAGTGGGTTCACCAGAAAATGATCGCC GAGGGGCACTCACCTGATGTTTTGACATACAACGTGGTGATGCGTGCCAAGTATATGCTC AGGAAATTGGATCAGTTCCATAAGTTGCTTGATGAGATGGGAAAAAATGGGCTTGCACCT GACCTCTATACGTACAATCTTTTGCTTCATGTGCTTGGTAAAGGAGACAAACCACTTGCT GCTCTCAATTTACTGAACTATATGAGCGATGTTGGCTGTGTACCGACTGTGCTCCATTTC ACAAACTTGATAGATGGTCTCAGCCGTGCTGGCAACCTAGAAGCTTGCAAGTATTTCTTC GATGAGATGGTCAAGAAAGGGTGTCAACCAGATGTTGTTTGCTACACAGTTATGATCACA GGTTATGTGGCAGCTGGGGAATTCGATGAAGCCCAGAAGTTCTTCGATGATATGTTGCTG AGAGGGCAGCTTCCGAATGTGTACACATACAATTCCATGATATGCGGACTTTGCATAGTA GGAGAATTTGATAAAGCATGCTCTCTGCTGAAGGACATGGAGTCGCGAGGATGCACTCCA AACTTTACAGTGTATAGTACTCTAGTGAGTAGGTTGCGAAATGCTGGGAAGGATTCTGAA GCTAACAATATCATTCAGTACATGACAAATAAGGGTCATTATCTTCATTTATTGTCAAGG TTCAGGAGATATAGAAGATGCTGA

Peptide Sequence

PEP ID	Os10t0506000-00
PEP Infomation	pep chromosome:IRGSP-1.0:10:19350042:19351774:1 gene:Os10g0506000 transcript:Os10t0506000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat motif containing gene 12, PPR motif-containing gene 12 description:Pentatricopeptide repeat containing protein. (Os10t0506000-00)
Sequence	MNPGARPPALQTLSARLWPRRRLCGVHAGSRSGGEGPGARESGGGDVRIGRGEEEEEGGL DGGRVPQEVLLRLPTPPGRAETDDDDGENLSPGAGSGSRRRFFEELRLKADRIVKILLQD GPGFNTRQALDEMRPRVSNALVREVLLKFVVSIDGVNRARYPRLAYKFFLWAEEQEGYRH GTSMYNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFHLLVCTSGRAGLRRRLVERF IKSSNFNYRPFRNSFNAILHTLLTIEQYSLIEWVHQKMIAEGHSPDVLTYNVVMRAKYML RKLDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALNLLNYMSDVGCVPTVLHF TNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLL RGQLPNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSE ANNIIQYMTNKGHYLHLLSRFRRYRRC

Transcript Sequence

Transcript ID	Os10t0506000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:19350042:19351774:1 gene:Os10g0506000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat motif containing gene 12, PPR motif-containing gene 12 description:Pentatricopeptide repeat containing protein. (Os10t0506000-00)
Sequence	CTTCGCGCCGCCGCCCGCCATTGCCGCCGCCACCACCACCGTGCCCGAGCTCGCCGACCA CCACCCCGCCGTGGCTCGCGCGAGATGCGTTCACGCGAGCCCCTGAGCGCTCCCTCGCAA TGAACCCGGGCGCTCGCCCGCCCGCGTTGCAGACGCTCTCCGCCCGCCTCTGGCCGCGCA GGCGGCTCTGCGGAGTCCACGCGGGGAGCCGGAGCGGGGGCGAGGGGCCTGGAGCTAGGG AGAGTGGTGGTGGTGACGTTCGCATTGGAAGGGGGGAGGAGGAGGAGGAGGGAGGGTTGG ATGGCGGACGCGTCCCGCAGGAAGTGCTGCTCCGGCTGCCGACGCCGCCCGGCCGGGCTG AGACCGACGACGATGATGGCGAAAACTTGTCCCCTGGCGCGGGGTCCGGTTCCAGGAGGA GGTTCTTTGAGGAGCTGAGGTTGAAGGCGGATAGGATTGTCAAGATCCTGCTTCAGGATG GCCCGGGGTTCAACACCCGCCAGGCGCTCGACGAAATGCGCCCGAGGGTGTCCAATGCCC TTGTGAGGGAAGTGCTGCTCAAATTTGTTGTCTCGATCGATGGCGTGAACCGCGCTAGGT ACCCGAGGCTGGCTTACAAGTTCTTCCTGTGGGCGGAGGAACAGGAGGGGTACCGGCACG GCACGAGCATGTACAACCTCATCTTGAAGATCTTTGCGGAGTGTGGGGAGCTCAAGGCGA TGTGGCGGCTGCTTGAGGATATGACAGATAAGGGGCTGCCTGTGTCTTCCCGGACGTTCC ACCTCTTGGTATGCACATCGGGGCGGGCTGGATTGAGGCGGAGGCTGGTGGAGAGGTTCA TCAAGTCAAGTAATTTCAATTATCGCCCATTTAGGAATTCATTCAATGCGATACTGCACA CTCTGCTGACCATAGAGCAGTATTCGTTGATTGAGTGGGTTCACCAGAAAATGATCGCCG AGGGGCACTCACCTGATGTTTTGACATACAACGTGGTGATGCGTGCCAAGTATATGCTCA GGAAATTGGATCAGTTCCATAAGTTGCTTGATGAGATGGGAAAAAATGGGCTTGCACCTG ACCTCTATACGTACAATCTTTTGCTTCATGTGCTTGGTAAAGGAGACAAACCACTTGCTG CTCTCAATTTACTGAACTATATGAGCGATGTTGGCTGTGTACCGACTGTGCTCCATTTCA CAAACTTGATAGATGGTCTCAGCCGTGCTGGCAACCTAGAAGCTTGCAAGTATTTCTTCG ATGAGATGGTCAAGAAAGGGTGTCAACCAGATGTTGTTTGCTACACAGTTATGATCACAG GTTATGTGGCAGCTGGGGAATTCGATGAAGCCCAGAAGTTCTTCGATGATATGTTGCTGA GAGGGCAGCTTCCGAATGTGTACACATACAATTCCATGATATGCGGACTTTGCATAGTAG GAGAATTTGATAAAGCATGCTCTCTGCTGAAGGACATGGAGTCGCGAGGATGCACTCCAA ACTTTACAGTGTATAGTACTCTAGTGAGTAGGTTGCGAAATGCTGGGAAGGATTCTGAAG CTAACAATATCATTCAGTACATGACAAATAAGGGTCATTATCTTCATTTATTGTCAAGGT TCAGGAGATATAGAAGATGCTGATATGTGAGGCCCCATAGTCAGTTACATTGTAATTTTG TTGTATTGTTTCCAACTTGGAAAGATGGATCATAAGGGAGTACTTTGTGAGGT