Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0505900-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:19346334:19348263:1 gene:Os10g0505900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0505900-01)
Sequence

ATGGACGCGCCGGCCATGCTCACGACCAAGCACGTCCCCGAGGACGTCGGCCTCCGCAAC
GTCGCGGCGGCGGAGGAGGAGGGGGGACAGGGGCAGATGCACCGTGGGGAGGAGAAGCAG
CACAAGCCGGTGCTCAAGAAGGTGAAGGAGAAGGTCAAGAAGATCAAGAACACCATCGCC
GGCGGCGGCGGCGGCGGCCACGGCGGGAACAACGGCGGCGAGCGCGCTAGCGGAAGCAGT
AGCAGCAGCGAGGAGGGCGAGGACGATGTGGCGGCGCAGAGGATGGGTGACGTGGACCAG
CGCGGGTACCAGGAGGACGTCGAGGAGGACAAGCCCGTCGCCATGGAGTCCGATCCCGAG
GTCCATGGCGCTCCGATGTACGACTCGGCGAGGATCCCCTCGGTGCAGGAGGTGGAGGGC
GACGGCGGCGCGCCGAGGGTGCGGCTCGGCGACCTCGGCGGCCCCGTCGTCGAGGACCCG
GCGGCGCCGCGCTCCACGACGCGCGTGCCGCGGGAGGGGGAGGACATCGGCACGACGCCC
GTCGTCCGCGCCTTCGAGTCGATGAGCGTCTCCGACGACCCGAAGCACGTCGGCGCGGCC
GGGAAGCCGGACGCCGACGTGCAGAACGACCCAATGCCGGTGTCGGACGCCGCCACCGCC
GGTGAGGAGTGGAAGGACGCGACGCCCGACAGCGCAGCTGCAGGCGCGACGCCCGGCGCG
ACGTACACCGACAAGATCAAGTCGGCGGCGGCGGGCACCACGGAGTACGGCAAGAAGCTG
GCCACCACGGTGTACGAGAAGGTCGCCGGCGTCGGGACGGCCGTGGCCGGCAAGGTGCGG
CAGGTGACGCAGTCGGCCGGCACCGCCACACCAGGCGTCGCCGGCGGCGCCGCCGGCTCA
CAGTCGCAGGACGACGTCGACGCCTCCACCACCCTCGCCTCCGGCGAGCCGGCGACCGGG
GGGCAGCAGCAGCAGGACAAGGGGGTAACAGTCACCGGCTACATCGCCGACAAGCTCCGC
CCGGGCGACGAGGACCGCGCGCTCAGCGAGGCCATCTCCGGCGCGGTGCAGCGGCGCAAG
GACGACGTGGCGCAGCGCGTTCCGGCCGTGGCGCCGGCGGCGCCGGGCGACACGATCGCC
AAGGTGCGGGAGGCGCCCGCGCAGGTGCTCGCCAAGGCGCGCGACGCCGTCACGTCGCTC
ACCGGCGGCACCCATGTCTCCGACACCGTGCAGCCCACCACCACCACAGAGGCGGATGGC
GCGGAGGTGGAATCGGCGCCGGTGATTCGCGGGGAGGAGATCGGCGAGACCCAACGTCAG
CCGAACGTAAGCATGACATGA

Peptide Sequence

PEP ID

Os10t0505900-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:19346334:19348263:1 gene:Os10g0505900 transcript:Os10t0505900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0505900-01)
Sequence

MDAPAMLTTKHVPEDVGLRNVAAAEEEGGQGQMHRGEEKQHKPVLKKVKEKVKKIKNTIA
GGGGGGHGGNNGGERASGSSSSSEEGEDDVAAQRMGDVDQRGYQEDVEEDKPVAMESDPE
VHGAPMYDSARIPSVQEVEGDGGAPRVRLGDLGGPVVEDPAAPRSTTRVPREGEDIGTTP
VVRAFESMSVSDDPKHVGAAGKPDADVQNDPMPVSDAATAGEEWKDATPDSAAAGATPGA
TYTDKIKSAAAGTTEYGKKLATTVYEKVAGVGTAVAGKVRQVTQSAGTATPGVAGGAAGS
QSQDDVDASTTLASGEPATGGQQQQDKGVTVTGYIADKLRPGDEDRALSEAISGAVQRRK
DDVAQRVPAVAPAAPGDTIAKVREAPAQVLAKARDAVTSLTGGTHVSDTVQPTTTTEADG
AEVESAPVIRGEEIGETQRQPNVSMT

Transcript Sequence

Transcript ID

Os10t0505900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:19346334:19348263:1 gene:Os10g0505900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os10t0505900-01)
Sequence

ATCACCTCCTCGTCTTCTTCTTCCACCTCGCAAATCCGATCAACACATCAGCTTGAGAAA
CAATGGACGCGCCGGCCATGCTCACGACCAAGCACGTCCCCGAGGACGTCGGCCTCCGCA
ACGTCGCGGCGGCGGAGGAGGAGGGGGGACAGGGGCAGATGCACCGTGGGGAGGAGAAGC
AGCACAAGCCGGTGCTCAAGAAGGTGAAGGAGAAGGTCAAGAAGATCAAGAACACCATCG
CCGGCGGCGGCGGCGGCGGCCACGGCGGGAACAACGGCGGCGAGCGCGCTAGCGGAAGCA
GTAGCAGCAGCGAGGAGGGCGAGGACGATGTGGCGGCGCAGAGGATGGGTGACGTGGACC
AGCGCGGGTACCAGGAGGACGTCGAGGAGGACAAGCCCGTCGCCATGGAGTCCGATCCCG
AGGTCCATGGCGCTCCGATGTACGACTCGGCGAGGATCCCCTCGGTGCAGGAGGTGGAGG
GCGACGGCGGCGCGCCGAGGGTGCGGCTCGGCGACCTCGGCGGCCCCGTCGTCGAGGACC
CGGCGGCGCCGCGCTCCACGACGCGCGTGCCGCGGGAGGGGGAGGACATCGGCACGACGC
CCGTCGTCCGCGCCTTCGAGTCGATGAGCGTCTCCGACGACCCGAAGCACGTCGGCGCGG
CCGGGAAGCCGGACGCCGACGTGCAGAACGACCCAATGCCGGTGTCGGACGCCGCCACCG
CCGGTGAGGAGTGGAAGGACGCGACGCCCGACAGCGCAGCTGCAGGCGCGACGCCCGGCG
CGACGTACACCGACAAGATCAAGTCGGCGGCGGCGGGCACCACGGAGTACGGCAAGAAGC
TGGCCACCACGGTGTACGAGAAGGTCGCCGGCGTCGGGACGGCCGTGGCCGGCAAGGTGC
GGCAGGTGACGCAGTCGGCCGGCACCGCCACACCAGGCGTCGCCGGCGGCGCCGCCGGCT
CACAGTCGCAGGACGACGTCGACGCCTCCACCACCCTCGCCTCCGGCGAGCCGGCGACCG
GGGGGCAGCAGCAGCAGGACAAGGGGGTAACAGTCACCGGCTACATCGCCGACAAGCTCC
GCCCGGGCGACGAGGACCGCGCGCTCAGCGAGGCCATCTCCGGCGCGGTGCAGCGGCGCA
AGGACGACGTGGCGCAGCGCGTTCCGGCCGTGGCGCCGGCGGCGCCGGGCGACACGATCG
CCAAGGTGCGGGAGGCGCCCGCGCAGGTGCTCGCCAAGGCGCGCGACGCCGTCACGTCGC
TCACCGGCGGCACCCATGTCTCCGACACCGTGCAGCCCACCACCACCACAGAGGCGGATG
GCGCGGAGGTGGAATCGGCGCCGGTGATTCGCGGGGAGGAGATCGGCGAGACCCAACGTC
AGCCGAACGTAAGCATGACATGAAGCGTTGTAGAAATGGATCCTCTCGTGTGTGTCTGTA
TGTTGCCACGTATACACGTGTAAGTGTAAGAAAAGTGTCAGTGTGCTTGGAATAATAAGC
CGTTATGTACGGCTTTTGTGTCGATGTGCAGTTTTTGTTTTTTGATGTCTTCTGTGTGTA
TGTAAGCAAGCCCGTTTTGAAAATGGCCAAGTTCAGTTGAAACTTGT