Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os10t0504200-01
CDS Infomation

cds chromosome:IRGSP-1.0:10:19255699:19258146:-1 gene:Os10g0504200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 family protein. (Os10t0504200-01)
Sequence

ATGGCCGTGGCGGCGCCGGCGAAGGCGGCGCACGCGCTGGCGGCCGCCGCGGCGGGGATG
GTGCTCCTGTGGTGCGTGCACTTTCGCGGCGGCCTCGCGCTCAGCTCCCCCACCAACAAG
GGCCTCATCTTCAACGTTCATCCTGTGCTTATGCTGATCGGGTTCATCATTCTAGGAAGT
GAAGCCATAATGGGCTACAAAATATGGCCATGGGGCCATGACACAAATAAGATGGTCCAT
TTGCTTCTTCATGCTATTGCACTTTTGCTGGGTTCAGTTGGAATATATGCTGCCTTCAAG
TTTCACAATGAAAGTGGAATTGCTAACCTCTACAGCCTGCACTCCTGGGTTGGACTTGGA
ACTATCTGTTTATATGGTGTACAGTGGATATTTGGCTTCGTCACCTTCTTCTTCCCCGGC
GCTTCGCCGTCGCTCCGACGCGCCGCGCTCCCATGGCACGTCCGCTCGGGCCTTCTCGTC
TACATATTAGCGTTGCTCGCGGCGGAGCTGGGGTTCCTGGAGAAGCTCACCTTCCTTGAG
GCCGGAGGGCTCGGCAGGTACAGCTCGGAGGCCCTGCTTGTGAACTTCACCGCCGTGCTC
GTCATACTGCTGGGCTCAGCCGTCGTGATGTATGTTACTGCTCCGATGCACAATGAACAT
TCTCATGGGTATTCAGCAGTGCGCAAGCCATGA

Peptide Sequence

PEP ID

Os10t0504200-01
PEP Infomation

pep chromosome:IRGSP-1.0:10:19255699:19258146:-1 gene:Os10g0504200 transcript:Os10t0504200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 family protein. (Os10t0504200-01)
Sequence

MAVAAPAKAAHALAAAAAGMVLLWCVHFRGGLALSSPTNKGLIFNVHPVLMLIGFIILGS
EAIMGYKIWPWGHDTNKMVHLLLHAIALLLGSVGIYAAFKFHNESGIANLYSLHSWVGLG
TICLYGVQWIFGFVTFFFPGASPSLRRAALPWHVRSGLLVYILALLAAELGFLEKLTFLE
AGGLGRYSSEALLVNFTAVLVILLGSAVVMYVTAPMHNEHSHGYSAVRKP

Transcript Sequence

Transcript ID

Os10t0504200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:10:19255699:19258146:-1 gene:Os10g0504200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cytochrome b561 family protein. (Os10t0504200-01)
Sequence

GACGCTGCGACGAACCGGAGAAGGATTTTCTTCCGATCTCGCTTCCACCTCGCCGCCTCG
CCGGGGAGGAGGAGGGTCGATGGCCGTGGCGGCGCCGGCGAAGGCGGCGCACGCGCTGGC
GGCCGCCGCGGCGGGGATGGTGCTCCTGTGGTGCGTGCACTTTCGCGGCGGCCTCGCGCT
CAGCTCCCCCACCAACAAGGGCCTCATCTTCAACGTTCATCCTGTGCTTATGCTGATCGG
GTTCATCATTCTAGGAAGTGAAGCCATAATGGGCTACAAAATATGGCCATGGGGCCATGA
CACAAATAAGATGGTCCATTTGCTTCTTCATGCTATTGCACTTTTGCTGGGTTCAGTTGG
AATATATGCTGCCTTCAAGTTTCACAATGAAAGTGGAATTGCTAACCTCTACAGCCTGCA
CTCCTGGGTTGGACTTGGAACTATCTGTTTATATGGTGTACAGTGGATATTTGGCTTCGT
CACCTTCTTCTTCCCCGGCGCTTCGCCGTCGCTCCGACGCGCCGCGCTCCCATGGCACGT
CCGCTCGGGCCTTCTCGTCTACATATTAGCGTTGCTCGCGGCGGAGCTGGGGTTCCTGGA
GAAGCTCACCTTCCTTGAGGCCGGAGGGCTCGGCAGGTACAGCTCGGAGGCCCTGCTTGT
GAACTTCACCGCCGTGCTCGTCATACTGCTGGGCTCAGCCGTCGTGATGTATGTTACTGC
TCCGATGCACAATGAACATTCTCATGGGTATTCAGCAGTGCGCAAGCCATGAGCCAGATG
AGCCATTGATCGATCCAGCTTCTTCATCGGCTGTGTCTGTTGTATAATTGTTTTGCTGAA
TTATTCCCATAGCTGCTGCCTGCTGCAAATGTGGTTCAGATCTATGGGCATGTGATGTAA
CTTTGTAAGTAACTGACGATATTAATTACGAGATGCGAAAATTTTG