Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os10t0501000-01
CDS Infomation	cds chromosome:IRGSP-1.0:10:19104084:19105701:1 gene:Os10g0501000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat motif containing gene 8, PPR motif-containing gene 8 description:Pentatricopeptide repeat domain containing protein. (Os10t0501000-01)
Sequence	GTCTTCCTCCGCGGCGGCGGCCTCCTCCGCCGCGTGGCGGTCGAGGAAGCCGTCTCCCCG TCGCCACCTCCTCCACCGCCGGGGAAACCGCCTCCCCCTCGCTCCGTGGCCGCCGAGGAG AGAGCCTCTCCCTCGCCTCCTCCGCCGCGGCGCAAGAAGGACTCCCTCTTCCGCCGGGTC GCGGCCGCCGCGGACCCGCGCCTCCCGCTGTCCCCCGTCCTGGAGCAGTGGTGCCTCGCC GAGGAACGCCATGTCGCGAAGCCCGAGGTCCAGTCCATCATCAAGTACCTCTGCCGCCGC CGCCGCTTCTCTCAGGCGCTCCAGCTTTCCATGTGGATGACTGAGCGGCTGCACCTCCAT CTATCCCCCGGCGACGTCGCGAATCGGCTGGAGCTGATCACCAAGGTCTATGGCCTCGAT AGGGCCGTGGAGTACTTCGACAGCATGCCGGATCAGCTGAAGCAACAGCAGTGCTATGGC TCCCTGCTTAAATGCTACGCCGAGGCCAATTGCGTGGAGAAGGCGGAGGAGCTCTTCGAG AAGATGCGGGGCATGGGGATGGCCAGTTCTTACGCTTACAATGTGATGATGAGGCTTTAT TTGCAGAATGGGCAGGTTGAGAGGGTGCACTCCATGCATCAGGCTATGGAAGAGAGTGGT ATTGTTCCTGATGTATCCACTACTCACACTCTGGTGGCAGTTCTAAGAAAAAAAAAGACT CTGGTGGCAGCGTACGTGGTTGCTGAAGATATTAAGGCGATTGAAAATGTTCTCGAGAAG GCCAATTCGTGCAACTCAATGTACATGTGCAGGATTGGTGTCCTACTTAAGATGAATGAC ATGGTTGGGGCTGAGAAAGCATATGAAGAGTGGGAAAGTAAGCATGTTTACCATGATTCC CGGTTAATCAACTTATTGGTGGATGCTTACTGCAAAGAAGGTCTTATGGATAAGGCAGAA GCTCTTGTAGATCAATTCATCAAGAAAGGGAGGATGCCTTTTGCCAATACTTGTTATAAG TTGGCTGGTGGATATTTCAAGGTTGGTCAGGTGTCGAAGGCAGCAGATCTCACAAAGAAG GCACTTGCTTCTGCGAGTAATGAATGGATACCTGACCTGACGAATGTGCTGATGAGCCTG AACTATTTCGCGGAGCAAAAGAATGTCGAAGCAGCTGAGGAGATGATGAGCTTATTACAG AGATTGGTTACTCCAACAAGGGACATTTACCATGGGTTACTGAAGACATATGTCAATGCA GGAAAACCAGTGTCAGACTTGCTTCATCGTATGAAAAAAGATGGTATGGAGGCTGATGAG GAGACAGAGAAAATCCTTGCGGGAGAAGTCCACTAG

Peptide Sequence

PEP ID	Os10t0501000-01
PEP Infomation	pep chromosome:IRGSP-1.0:10:19104084:19105701:1 gene:Os10g0501000 transcript:Os10t0501000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat motif containing gene 8, PPR motif-containing gene 8 description:Pentatricopeptide repeat domain containing protein. (Os10t0501000-01)
Sequence	VFLRGGGLLRRVAVEEAVSPSPPPPPPGKPPPPRSVAAEERASPSPPPPRRKKDSLFRRV AAAADPRLPLSPVLEQWCLAEERHVAKPEVQSIIKYLCRRRRFSQALQLSMWMTERLHLH LSPGDVANRLELITKVYGLDRAVEYFDSMPDQLKQQQCYGSLLKCYAEANCVEKAEELFE KMRGMGMASSYAYNVMMRLYLQNGQVERVHSMHQAMEESGIVPDVSTTHTLVAVLRKKKT LVAAYVVAEDIKAIENVLEKANSCNSMYMCRIGVLLKMNDMVGAEKAYEEWESKHVYHDS RLINLLVDAYCKEGLMDKAEALVDQFIKKGRMPFANTCYKLAGGYFKVGQVSKAADLTKK ALASASNEWIPDLTNVLMSLNYFAEQKNVEAAEEMMSLLQRLVTPTRDIYHGLLKTYVNA GKPVSDLLHRMKKDGMEADEETEKILAGEVH

Transcript Sequence

Transcript ID	Os10t0501000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:10:19104084:19105701:1 gene:Os10g0501000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:pentatricopeptide repeat motif containing gene 8, PPR motif-containing gene 8 description:Pentatricopeptide repeat domain containing protein. (Os10t0501000-01)
Sequence	GTGTCTTCCTCCGCGGCGGCGGCCTCCTCCGCCGCGTGGCGGTCGAGGAAGCCGTCTCCC CGTCGCCACCTCCTCCACCGCCGGGGAAACCGCCTCCCCCTCGCTCCGTGGCCGCCGAGG AGAGAGCCTCTCCCTCGCCTCCTCCGCCGCGGCGCAAGAAGGACTCCCTCTTCCGCCGGG TCGCGGCCGCCGCGGACCCGCGCCTCCCGCTGTCCCCCGTCCTGGAGCAGTGGTGCCTCG CCGAGGAACGCCATGTCGCGAAGCCCGAGGTCCAGTCCATCATCAAGTACCTCTGCCGCC GCCGCCGCTTCTCTCAGGCGCTCCAGCTTTCCATGTGGATGACTGAGCGGCTGCACCTCC ATCTATCCCCCGGCGACGTCGCGAATCGGCTGGAGCTGATCACCAAGGTCTATGGCCTCG ATAGGGCCGTGGAGTACTTCGACAGCATGCCGGATCAGCTGAAGCAACAGCAGTGCTATG GCTCCCTGCTTAAATGCTACGCCGAGGCCAATTGCGTGGAGAAGGCGGAGGAGCTCTTCG AGAAGATGCGGGGCATGGGGATGGCCAGTTCTTACGCTTACAATGTGATGATGAGGCTTT ATTTGCAGAATGGGCAGGTTGAGAGGGTGCACTCCATGCATCAGGCTATGGAAGAGAGTG GTATTGTTCCTGATGTATCCACTACTCACACTCTGGTGGCAGTTCTAAGAAAAAAAAAGA CTCTGGTGGCAGCGTACGTGGTTGCTGAAGATATTAAGGCGATTGAAAATGTTCTCGAGA AGGCCAATTCGTGCAACTCAATGTACATGTGCAGGATTGGTGTCCTACTTAAGATGAATG ACATGGTTGGGGCTGAGAAAGCATATGAAGAGTGGGAAAGTAAGCATGTTTACCATGATT CCCGGTTAATCAACTTATTGGTGGATGCTTACTGCAAAGAAGGTCTTATGGATAAGGCAG AAGCTCTTGTAGATCAATTCATCAAGAAAGGGAGGATGCCTTTTGCCAATACTTGTTATA AGTTGGCTGGTGGATATTTCAAGGTTGGTCAGGTGTCGAAGGCAGCAGATCTCACAAAGA AGGCACTTGCTTCTGCGAGTAATGAATGGATACCTGACCTGACGAATGTGCTGATGAGCC TGAACTATTTCGCGGAGCAAAAGAATGTCGAAGCAGCTGAGGAGATGATGAGCTTATTAC AGAGATTGGTTACTCCAACAAGGGACATTTACCATGGGTTACTGAAGACATATGTCAATG CAGGAAAACCAGTGTCAGACTTGCTTCATCGTATGAAAAAAGATGGTATGGAGGCTGATG AGGAGACAGAGAAAATCCTTGCGGGAGAAGTCCACTAGGTACACAGGATTGAATAAAACA TATCACTGACCAATTCCTTTTCTTTGCTTATTTTGCTGTCCTTTTTCTTGTTTCTGGGGC AATGAAGTTCAAACCCACTAGCCCGTGGATTTGAGTATTTGATAATAAACCACTATACAA CTGCTTATAT